RNA–Protein interactions for RNA: ENST00000471993.1

AC078828.1-201, humanhuman

TSL 3 BASIC

Gene AC078828.1, Length 458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078828.1-201ENST00000471993 ITGB7P26010 798 aa11.41□□□□□ -0.58
AC078828.1-201ENST00000471993 UBAP2LQ14157 1087 aaKnown RBP11.41□□□□□ -0.58
AC078828.1-201ENST00000471993 GRIN2CQ14957 1233 aa11.41□□□□□ -0.58
AC078828.1-201ENST00000471993 SUV39H2Q9H5I1 410 aa11.41□□□□□ -0.58
AC078828.1-201ENST00000471993 GOLGA6L1Q8N7Z2 621 aa11.4□□□□□ -0.58
AC078828.1-201ENST00000471993 PHF24Q9UPV7 400 aa11.4□□□□□ -0.58
AC078828.1-201ENST00000471993 C1QTNF9BB2RNN3 333 aa11.39□□□□□ -0.59
AC078828.1-201ENST00000471993 TRAK2O60296 914 aa11.39□□□□□ -0.59
AC078828.1-201ENST00000471993 SCTRP47872 440 aa11.39□□□□□ -0.59
AC078828.1-201ENST00000471993 TRIM34Q9BYJ4 488 aa11.39□□□□□ -0.59
AC078828.1-201ENST00000471993 PCDHB9Q9Y5E1 797 aa11.39□□□□□ -0.59
AC078828.1-201ENST00000471993 ZBBXA8MT70 800 aa11.38□□□□□ -0.59
AC078828.1-201ENST00000471993 SLCO4C1Q6ZQN7 724 aa11.38□□□□□ -0.59
AC078828.1-201ENST00000471993 CD163Q86VB7 1156 aa11.38□□□□□ -0.59
AC078828.1-201ENST00000471993 ARHGEF10LQ9HCE6 1279 aa11.38□□□□□ -0.59
AC078828.1-201ENST00000471993 SUPT5HO00267 1087 aaKnown RBP11.37□□□□□ -0.59
AC078828.1-201ENST00000471993 GNB5O14775 395 aa11.37□□□□□ -0.59
AC078828.1-201ENST00000471993 OSBPL3Q9H4L5 887 aa11.37□□□□□ -0.59
AC078828.1-201ENST00000471993 GPAMQ9HCL2 828 aa11.37□□□□□ -0.59
AC078828.1-201ENST00000471993 LBRQ14739 615 aaKnown RBP11.36□□□□□ -0.59
AC078828.1-201ENST00000471993 A0A1B0GTH6 734 aa11.35□□□□□ -0.59
AC078828.1-201ENST00000471993 PIK3R2O00459 728 aa11.35□□□□□ -0.59
AC078828.1-201ENST00000471993 RNF20Q5VTR2 975 aa11.35□□□□□ -0.59
AC078828.1-201ENST00000471993 FBXO45P0C2W1 286 aa11.34□□□□□ -0.59
AC078828.1-201ENST00000471993 CHRNA4P43681 627 aa11.34□□□□□ -0.59
AC078828.1-201ENST00000471993 ATXN7L1Q9ULK2 861 aaPredicted RBP11.34□□□□□ -0.59
AC078828.1-201ENST00000471993 C2CD2LO14523 706 aa11.33□□□□□ -0.6
AC078828.1-201ENST00000471993 AMPD1P23109 780 aa11.33□□□□□ -0.6
AC078828.1-201ENST00000471993 GGA1Q9UJY5 639 aa11.33□□□□□ -0.6
AC078828.1-201ENST00000471993 DGKGP49619 791 aa11.32□□□□□ -0.6
AC078828.1-201ENST00000471993 ESYT1Q9BSJ8 1104 aa11.32□□□□□ -0.6
AC078828.1-201ENST00000471993 BMP4P12644 408 aa11.31□□□□□ -0.6
AC078828.1-201ENST00000471993 CNKSR1Q969H4 720 aa11.31□□□□□ -0.6
AC078828.1-201ENST00000471993 RAB6BQ9NRW1 208 aa11.31□□□□□ -0.6
AC078828.1-201ENST00000471993 NDFIP2Q9NV92 336 aa11.31□□□□□ -0.6
AC078828.1-201ENST00000471993 ATP1B4Q9UN42 357 aaPredicted RBP11.31□□□□□ -0.6
AC078828.1-201ENST00000471993 GNRH1P01148 92 aa11.3□□□□□ -0.6
AC078828.1-201ENST00000471993 IL2RAP01589 272 aa11.3□□□□□ -0.6
AC078828.1-201ENST00000471993 EPXP11678 715 aa11.3□□□□□ -0.6
AC078828.1-201ENST00000471993 RFC5P40937 340 aa11.3□□□□□ -0.6
AC078828.1-201ENST00000471993 KRTAP1-3Q8IUG1 177 aa11.3□□□□□ -0.6
AC078828.1-201ENST00000471993 DDRGK1Q96HY6 314 aa11.3□□□□□ -0.6
AC078828.1-201ENST00000471993 BTBD6Q96KE9 485 aa11.3□□□□□ -0.6
AC078828.1-201ENST00000471993 HRH3Q9Y5N1 445 aa11.3□□□□□ -0.6
AC078828.1-201ENST00000471993 PHKA2P46019 1235 aa11.29□□□□□ -0.6
AC078828.1-201ENST00000471993 CENPCQ03188 943 aa11.29□□□□□ -0.6
AC078828.1-201ENST00000471993 NEUROD2Q15784 382 aa11.29□□□□□ -0.6
AC078828.1-201ENST00000471993 ABHD17AQ96GS6 310 aa11.29□□□□□ -0.6
AC078828.1-201ENST00000471993 NOP53Q9NZM5 478 aaKnown RBP11.29□□□□□ -0.6
AC078828.1-201ENST00000471993 PCDHB11Q9Y5F2 797 aa11.29□□□□□ -0.6
AC078828.1-201ENST00000471993 FGFR3P22607 806 aa11.28□□□□□ -0.6
AC078828.1-201ENST00000471993 FAM117AQ9C073 453 aa11.28□□□□□ -0.6
AC078828.1-201ENST00000471993 RUBCNLQ9H714 662 aa11.28□□□□□ -0.6
AC078828.1-201ENST00000471993 MCCD1P59942 119 aaPredicted RBP11.27□□□□□ -0.61
AC078828.1-201ENST00000471993 SEMA6BQ9H3T3 888 aa11.27□□□□□ -0.61
AC078828.1-201ENST00000471993 CSB-PGBD3P0DP91 1061 aa11.26□□□□□ -0.61
AC078828.1-201ENST00000471993 ARAFP10398 606 aa11.26□□□□□ -0.61
AC078828.1-201ENST00000471993 CTBSQ01459 385 aa11.26□□□□□ -0.61
AC078828.1-201ENST00000471993 PGBD3Q8N328 593 aa11.26□□□□□ -0.61
AC078828.1-201ENST00000471993 ZSCAN10Q96SZ4 725 aaPredicted RBP11.26□□□□□ -0.61
AC078828.1-201ENST00000471993 FHDC1Q9C0D6 1143 aaPredicted RBP11.26□□□□□ -0.61
AC078828.1-201ENST00000471993 BNIP3LO60238 219 aa11.25□□□□□ -0.61
AC078828.1-201ENST00000471993 MSX1P28360 303 aa11.25□□□□□ -0.61
AC078828.1-201ENST00000471993 C4orf17Q53FE4 359 aa11.25□□□□□ -0.61
AC078828.1-201ENST00000471993 EFHC2Q5JST6 749 aa11.25□□□□□ -0.61
AC078828.1-201ENST00000471993 ZMYM1Q5SVZ6 1142 aa11.25□□□□□ -0.61
AC078828.1-201ENST00000471993 RNF135Q8IUD6 432 aa11.25□□□□□ -0.61
AC078828.1-201ENST00000471993 GJD4Q96KN9 370 aaPredicted RBP11.25□□□□□ -0.61
AC078828.1-201ENST00000471993 KDM4CQ9H3R0 1056 aa11.25□□□□□ -0.61
AC078828.1-201ENST00000471993 DOC2BQ14184 412 aa11.23□□□□□ -0.61
AC078828.1-201ENST00000471993 GNASQ5JWF2 1037 aa11.23□□□□□ -0.61
AC078828.1-201ENST00000471993 XAGE2Q96GT9 111 aa11.23□□□□□ -0.61
AC078828.1-201ENST00000471993 CRISPLD1Q9H336 500 aa11.23□□□□□ -0.61
AC078828.1-201ENST00000471993 ESF1Q9H501 851 aaKnown RBP11.23□□□□□ -0.61
AC078828.1-201ENST00000471993 ZNF592Q92610 1267 aa11.22□□□□□ -0.61
AC078828.1-201ENST00000471993 GPBP1L1Q9HC44 474 aaPredicted RBP11.22□□□□□ -0.61
AC078828.1-201ENST00000471993 NR1H3Q13133 447 aa11.21□□□□□ -0.61
AC078828.1-201ENST00000471993 TMEM214Q6NUQ4 689 aaKnown RBP11.2□□□□□ -0.62
AC078828.1-201ENST00000471993 CHSY3Q70JA7 882 aa11.2□□□□□ -0.62
AC078828.1-201ENST00000471993 KRTAP4-12Q9BQ66 201 aa11.2□□□□□ -0.62
AC078828.1-201ENST00000471993 NEURL1BA8MQ27 555 aa11.19□□□□□ -0.62
AC078828.1-201ENST00000471993 DNAAF2Q9NVR5 837 aaKnown RBP11.19□□□□□ -0.62
AC078828.1-201ENST00000471993 GTF2E1P29083 439 aaPredicted RBP11.18□□□□□ -0.62
AC078828.1-201ENST00000471993 TMEM259Q4ZIN3 620 aa11.18□□□□□ -0.62
AC078828.1-201ENST00000471993 UBTFP17480 764 aaKnown RBP11.16□□□□□ -0.62
AC078828.1-201ENST00000471993 GATA4P43694 442 aa11.16□□□□□ -0.62
AC078828.1-201ENST00000471993 RSPO4Q2I0M5 234 aaPredicted RBP11.16□□□□□ -0.62
AC078828.1-201ENST00000471993 FOXD4L6Q3SYB3 417 aaPredicted RBP11.16□□□□□ -0.62
AC078828.1-201ENST00000471993 LCE3BQ5TA77 95 aa11.16□□□□□ -0.62
AC078828.1-201ENST00000471993 FIGNL1Q6PIW4 674 aa11.16□□□□□ -0.62
AC078828.1-201ENST00000471993 FOXD4L3Q6VB84 417 aaPredicted RBP11.16□□□□□ -0.62
AC078828.1-201ENST00000471993 RHBDD1Q8TEB9 315 aa11.16□□□□□ -0.62
AC078828.1-201ENST00000471993 TRIM11Q96F44 468 aa11.15□□□□□ -0.62
AC078828.1-201ENST00000471993 PODXL2Q9NZ53 605 aa11.15□□□□□ -0.62
AC078828.1-201ENST00000471993 KLF15Q9UIH9 416 aa11.15□□□□□ -0.62
AC078828.1-201ENST00000471993 MYCP01106 439 aaPredicted RBP11.14□□□□□ -0.63
AC078828.1-201ENST00000471993 ADH6P28332 368 aa11.14□□□□□ -0.63
AC078828.1-201ENST00000471993 FCHSD1Q86WN1 690 aa11.14□□□□□ -0.63
AC078828.1-201ENST00000471993 PPARGC1BQ86YN6 1023 aaKnown RBP11.14□□□□□ -0.63
AC078828.1-201ENST00000471993 CDCA7Q9BWT1 371 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms