RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 IL2RAP01589 272 aa8.91□□□□□ -0.98
SCFD1-205ENST00000469043 USP4Q13107 963 aa8.91□□□□□ -0.98
SCFD1-205ENST00000469043 GNASQ5JWF2 1037 aa8.91□□□□□ -0.98
SCFD1-205ENST00000469043 TMEM214Q6NUQ4 689 aaKnown RBP8.91□□□□□ -0.98
SCFD1-205ENST00000469043 XAGE2Q96GT9 111 aa8.91□□□□□ -0.98
SCFD1-205ENST00000469043 CCDC85AQ96PX6 553 aaPredicted RBP8.91□□□□□ -0.98
SCFD1-205ENST00000469043 CDCA7Q9BWT1 371 aaPredicted RBP8.91□□□□□ -0.98
SCFD1-205ENST00000469043 PHF24Q9UPV7 400 aa8.91□□□□□ -0.98
SCFD1-205ENST00000469043 CNTNAP5Q8WYK1 1306 aa8.9□□□□□ -0.98
SCFD1-205ENST00000469043 LOC100996750A0A140TA64 210 aa8.9□□□□□ -0.98
SCFD1-205ENST00000469043 A0A1B0GTH6 734 aa8.9□□□□□ -0.98
SCFD1-205ENST00000469043 PHKA2P46019 1235 aa8.9□□□□□ -0.98
SCFD1-205ENST00000469043 MAP2K3P46734 347 aa8.9□□□□□ -0.98
SCFD1-205ENST00000469043 ACDQ96AP0 544 aa8.9□□□□□ -0.98
SCFD1-205ENST00000469043 KRTAP4-6Q9BYQ5 205 aa8.9□□□□□ -0.98
SCFD1-205ENST00000469043 CSB-PGBD3P0DP91 1061 aa8.89□□□□□ -0.99
SCFD1-205ENST00000469043 PGBD3Q8N328 593 aa8.89□□□□□ -0.99
SCFD1-205ENST00000469043 SLFNL1Q499Z3 407 aa8.88□□□□□ -0.99
SCFD1-205ENST00000469043 SIRT1Q96EB6 747 aa8.88□□□□□ -0.99
SCFD1-205ENST00000469043 GPAMQ9HCL2 828 aa8.88□□□□□ -0.99
SCFD1-205ENST00000469043 LBRQ14739 615 aaKnown RBP8.87□□□□□ -0.99
SCFD1-205ENST00000469043 DOLKQ9UPQ8 538 aa8.87□□□□□ -0.99
SCFD1-205ENST00000469043 HRH3Q9Y5N1 445 aa8.87□□□□□ -0.99
SCFD1-205ENST00000469043 OIP5O43482 229 aa8.86□□□□□ -0.99
SCFD1-205ENST00000469043 OXCT2Q9BYC2 517 aaPredicted RBP8.86□□□□□ -0.99
SCFD1-205ENST00000469043 TBC1D2BQ9UPU7 963 aa8.86□□□□□ -0.99
SCFD1-205ENST00000469043 EFHC2Q5JST6 749 aa8.85□□□□□ -0.99
SCFD1-205ENST00000469043 RNF135Q8IUD6 432 aa8.85□□□□□ -0.99
SCFD1-205ENST00000469043 PHTF2Q8N3S3 785 aa8.85□□□□□ -0.99
SCFD1-205ENST00000469043 FHDC1Q9C0D6 1143 aaPredicted RBP8.85□□□□□ -0.99
SCFD1-205ENST00000469043 TSGA10IPQ3SY00 556 aa8.84□□□□□ -0.99
SCFD1-205ENST00000469043 C4orf17Q53FE4 359 aa8.84□□□□□ -0.99
SCFD1-205ENST00000469043 DCAF5Q96JK2 942 aa8.84□□□□□ -0.99
SCFD1-205ENST00000469043 MSTNO14793 375 aa8.83□□□□□ -1
SCFD1-205ENST00000469043 MSX1P28360 303 aa8.83□□□□□ -1
SCFD1-205ENST00000469043 OXLD1Q5BKU9 147 aa8.83□□□□□ -1
SCFD1-205ENST00000469043 PPARGC1BQ86YN6 1023 aaKnown RBP8.83□□□□□ -1
SCFD1-205ENST00000469043 GALNT6Q8NCL4 622 aa8.83□□□□□ -1
SCFD1-205ENST00000469043 RHBDD1Q8TEB9 315 aa8.83□□□□□ -1
SCFD1-205ENST00000469043 KLRG1Q96E93 195 aa8.83□□□□□ -1
SCFD1-205ENST00000469043 GDF2Q9UK05 429 aaPredicted RBP8.83□□□□□ -1
SCFD1-205ENST00000469043 THBS1P07996 1170 aa8.82□□□□□ -1
SCFD1-205ENST00000469043 TLR1Q15399 786 aa8.82□□□□□ -1
SCFD1-205ENST00000469043 PLA2G4EQ3MJ16 856 aa8.82□□□□□ -1
SCFD1-205ENST00000469043 RUBCNLQ9H714 662 aa8.82□□□□□ -1
SCFD1-205ENST00000469043 ETNK1Q9HBU6 452 aa8.82□□□□□ -1
SCFD1-205ENST00000469043 ATXN7L1Q9ULK2 861 aaPredicted RBP8.81□□□□□ -1
SCFD1-205ENST00000469043 BMP4P12644 408 aa8.8□□□□□ -1
SCFD1-205ENST00000469043 IRF5Q13568 498 aa8.8□□□□□ -1
SCFD1-205ENST00000469043 WASHC4Q2M389 1173 aa8.8□□□□□ -1
SCFD1-205ENST00000469043 GOLGA6L1Q8N7Z2 621 aa8.8□□□□□ -1
SCFD1-205ENST00000469043 EDARADDQ8WWZ3 215 aa8.8□□□□□ -1
SCFD1-205ENST00000469043 MKL2Q9ULH7 1088 aa8.8□□□□□ -1
SCFD1-205ENST00000469043 VAC14Q08AM6 782 aa8.79□□□□□ -1
SCFD1-205ENST00000469043 UBAP2LQ14157 1087 aaKnown RBP8.79□□□□□ -1
SCFD1-205ENST00000469043 MAP7D1Q3KQU3 841 aa8.79□□□□□ -1
SCFD1-205ENST00000469043 RRAGCQ9HB90 399 aa8.79□□□□□ -1
SCFD1-205ENST00000469043 CHIC2Q9UKJ5 165 aa8.79□□□□□ -1
SCFD1-205ENST00000469043 FIGNL1Q6PIW4 674 aa8.78□□□□□ -1
SCFD1-205ENST00000469043 TBC1D9Q6ZT07 1266 aa8.78□□□□□ -1
SCFD1-205ENST00000469043 CRISPLD1Q9H336 500 aa8.78□□□□□ -1
SCFD1-205ENST00000469043 TIMELESSQ9UNS1 1208 aa8.78□□□□□ -1
SCFD1-205ENST00000469043 SHISA8B8ZZ34 492 aa8.77□□□□□ -1.01
SCFD1-205ENST00000469043 STAU1O95793 577 aaKnown RBP8.77□□□□□ -1.01
SCFD1-205ENST00000469043 INHAP05111 366 aa8.77□□□□□ -1.01
SCFD1-205ENST00000469043 FGFR3P22607 806 aa8.77□□□□□ -1.01
SCFD1-205ENST00000469043 ABL2P42684 1182 aa8.77□□□□□ -1.01
SCFD1-205ENST00000469043 GDF10P55107 478 aa8.77□□□□□ -1.01
SCFD1-205ENST00000469043 SNRPNP63162 240 aaKnown RBP8.77□□□□□ -1.01
SCFD1-205ENST00000469043 SEMA3FQ13275 785 aa8.77□□□□□ -1.01
SCFD1-205ENST00000469043 ALYREFQ86V81 257 aaKnown RBP8.77□□□□□ -1.01
SCFD1-205ENST00000469043 C1orf216Q8TAB5 229 aa8.77□□□□□ -1.01
SCFD1-205ENST00000469043 ABHD17AQ96GS6 310 aa8.77□□□□□ -1.01
SCFD1-205ENST00000469043 ARXQ96QS3 562 aa8.77□□□□□ -1.01
SCFD1-205ENST00000469043 SPOCK3Q9BQ16 436 aa8.77□□□□□ -1.01
SCFD1-205ENST00000469043 NIFKQ9BYG3 293 aaKnown RBP8.77□□□□□ -1.01
SCFD1-205ENST00000469043 GDPD2Q9HCC8 539 aa8.77□□□□□ -1.01
SCFD1-205ENST00000469043 PIK3R2O00459 728 aa8.76□□□□□ -1.01
SCFD1-205ENST00000469043 BNIP3LO60238 219 aa8.76□□□□□ -1.01
SCFD1-205ENST00000469043 AMPD1P23109 780 aa8.76□□□□□ -1.01
SCFD1-205ENST00000469043 PLA2G4AP47712 749 aa8.76□□□□□ -1.01
SCFD1-205ENST00000469043 AIDAQ96BJ3 306 aa8.76□□□□□ -1.01
SCFD1-205ENST00000469043 SOX11P35716 441 aa8.75□□□□□ -1.01
SCFD1-205ENST00000469043 SMTNP53814 917 aa8.75□□□□□ -1.01
SCFD1-205ENST00000469043 C1orf229Q6ZS94 237 aaPredicted RBP8.75□□□□□ -1.01
SCFD1-205ENST00000469043 NLRP8Q86W28 1048 aa8.75□□□□□ -1.01
SCFD1-205ENST00000469043 PLPP7Q8NBV4 271 aa8.75□□□□□ -1.01
SCFD1-205ENST00000469043 NDFIP2Q9NV92 336 aa8.75□□□□□ -1.01
SCFD1-205ENST00000469043 PCDHGC4Q9Y5F7 938 aa8.75□□□□□ -1.01
SCFD1-205ENST00000469043 C2CD2LO14523 706 aa8.74□□□□□ -1.01
SCFD1-205ENST00000469043 SCNN1DP51172 638 aa8.74□□□□□ -1.01
SCFD1-205ENST00000469043 CTBSQ01459 385 aa8.74□□□□□ -1.01
SCFD1-205ENST00000469043 ZCCHC2Q9C0B9 1178 aaKnown RBP8.74□□□□□ -1.01
SCFD1-205ENST00000469043 GGA1Q9UJY5 639 aa8.74□□□□□ -1.01
SCFD1-205ENST00000469043 SLCO4C1Q6ZQN7 724 aa8.73□□□□□ -1.01
SCFD1-205ENST00000469043 NBPF1Q3BBV0 1214 aa8.72□□□□□ -1.01
SCFD1-205ENST00000469043 SERTAD1Q9UHV2 236 aa8.72□□□□□ -1.01
SCFD1-205ENST00000469043 ATXN7O15265 892 aaPredicted RBP8.71□□□□□ -1.02
SCFD1-205ENST00000469043 ITGB2P05107 769 aa8.71□□□□□ -1.02
SCFD1-205ENST00000469043 ARAFP10398 606 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms