RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 MS4A1P11836 297 aa26.31■■□□□ 1.8
TMEM53-207ENST00000468117 SHANK3Q9BYB0 1731 aa26.31■■□□□ 1.8
TMEM53-207ENST00000468117 ZCRB1Q8TBF4 217 aaKnown RBP26.3■■□□□ 1.8
TMEM53-207ENST00000468117 KCNQ3O43525 872 aa26.29■■□□□ 1.8
TMEM53-207ENST00000468117 PELP1Q8IZL8 1130 aaKnown RBP26.29■■□□□ 1.8
TMEM53-207ENST00000468117 MVPQ14764 893 aaKnown RBP26.28■■□□□ 1.8
TMEM53-207ENST00000468117 PCDH11XQ9BZA7 1347 aa26.28■■□□□ 1.8
TMEM53-207ENST00000468117 PCDH11YQ9BZA8 1340 aa26.28■■□□□ 1.8
TMEM53-207ENST00000468117 NRAPQ86VF7 1730 aa26.28■■□□□ 1.8
TMEM53-207ENST00000468117 DCAF5Q96JK2 942 aa26.27■■□□□ 1.8
TMEM53-207ENST00000468117 EIF4A1P60842 406 aaKnown RBP26.27■■□□□ 1.8
TMEM53-207ENST00000468117 ARHGAP45Q92619 1136 aa26.27■■□□□ 1.8
TMEM53-207ENST00000468117 CACNA1FO60840 1977 aa26.26■■□□□ 1.79
TMEM53-207ENST00000468117 SLC52A2Q9HAB3 445 aa26.26■■□□□ 1.79
TMEM53-207ENST00000468117 HSP90AB1P08238 724 aaKnown RBP26.25■■□□□ 1.79
TMEM53-207ENST00000468117 TMEM57Q8N5G2 664 aa26.25■■□□□ 1.79
TMEM53-207ENST00000468117 JCADQ9P266 1359 aa26.24■■□□□ 1.79
TMEM53-207ENST00000468117 SLC4A2P04920 1241 aa26.24■■□□□ 1.79
TMEM53-207ENST00000468117 NFATC2IPQ8NCF5 419 aa26.24■■□□□ 1.79
TMEM53-207ENST00000468117 ITPRIPQ8IWB1 547 aa26.24■■□□□ 1.79
TMEM53-207ENST00000468117 SOS1Q07889 1333 aaPredicted RBP26.23■■□□□ 1.79
TMEM53-207ENST00000468117 NECTIN2Q92692 538 aa26.23■■□□□ 1.79
TMEM53-207ENST00000468117 DDX54Q8TDD1 881 aaKnown RBP26.22■■□□□ 1.79
TMEM53-207ENST00000468117 NWD2Q9ULI1 1742 aa26.22■■□□□ 1.79
TMEM53-207ENST00000468117 MRC1P22897 1456 aa26.22■■□□□ 1.79
TMEM53-207ENST00000468117 WNK3Q9BYP7 1800 aa26.22■■□□□ 1.79
TMEM53-207ENST00000468117 CCDC30Q5VVM6 783 aa26.21■■□□□ 1.79
TMEM53-207ENST00000468117 STK31Q9BXU1 1019 aa26.21■■□□□ 1.79
TMEM53-207ENST00000468117 API5Q9BZZ5 524 aaKnown RBP26.2■■□□□ 1.78
TMEM53-207ENST00000468117 DISP2A7MBM2 1401 aa26.2■■□□□ 1.78
TMEM53-207ENST00000468117 DDX19BQ9UMR2 479 aa26.19■■□□□ 1.78
TMEM53-207ENST00000468117 ABCC4O15439 1325 aa26.19■■□□□ 1.78
TMEM53-207ENST00000468117 SLC39A6Q13433 755 aa26.19■■□□□ 1.78
TMEM53-207ENST00000468117 HDGFL1Q5TGJ6 251 aa26.19■■□□□ 1.78
TMEM53-207ENST00000468117 SLIT2O94813 1529 aa26.18■■□□□ 1.78
TMEM53-207ENST00000468117 AAMPQ13685 434 aa26.18■■□□□ 1.78
TMEM53-207ENST00000468117 G2E3Q7L622 706 aa26.18■■□□□ 1.78
TMEM53-207ENST00000468117 CABP4P57796 275 aa26.17■■□□□ 1.78
TMEM53-207ENST00000468117 ZNF790Q6PG37 636 aa26.17■■□□□ 1.78
TMEM53-207ENST00000468117 RGS12O14924 1447 aa26.17■■□□□ 1.78
TMEM53-207ENST00000468117 PTPRCP08575 1304 aa26.17■■□□□ 1.78
TMEM53-207ENST00000468117 HOXB7P09629 217 aa26.17■■□□□ 1.78
TMEM53-207ENST00000468117 EIF2S2P20042 333 aaKnown RBP26.17■■□□□ 1.78
TMEM53-207ENST00000468117 NKX1-1Q15270 411 aaPredicted RBP26.17■■□□□ 1.78
TMEM53-207ENST00000468117 HEG1Q9ULI3 1381 aa26.16■■□□□ 1.78
TMEM53-207ENST00000468117 KDM2BQ8NHM5 1336 aa26.16■■□□□ 1.78
TMEM53-207ENST00000468117 SPATA31A1Q5TZJ5 1347 aa26.15■■□□□ 1.78
TMEM53-207ENST00000468117 GIGYF1O75420 1035 aaPredicted RBP26.15■■□□□ 1.78
TMEM53-207ENST00000468117 TOGARAM1Q9Y4F4 1720 aa26.14■■□□□ 1.78
TMEM53-207ENST00000468117 C8orf37Q96NL8 207 aa26.14■■□□□ 1.77
TMEM53-207ENST00000468117 PCDHB15Q9Y5E8 787 aa26.14■■□□□ 1.77
TMEM53-207ENST00000468117 HSPA1LP34931 641 aa26.13■■□□□ 1.77
TMEM53-207ENST00000468117 KAT6BQ8WYB5 2073 aa26.13■■□□□ 1.77
TMEM53-207ENST00000468117 C5P01031 1676 aa26.13■■□□□ 1.77
TMEM53-207ENST00000468117 PRAMEF22A3QJZ6 481 aa26.12■■□□□ 1.77
TMEM53-207ENST00000468117 ERVV-2B6SEH9 535 aa26.12■■□□□ 1.77
TMEM53-207ENST00000468117 FLIIQ13045 1269 aa26.11■■□□□ 1.77
TMEM53-207ENST00000468117 CENPQQ7L2Z9 268 aaPredicted RBP26.11■■□□□ 1.77
TMEM53-207ENST00000468117 NGLY1Q96IV0 654 aa26.11■■□□□ 1.77
TMEM53-207ENST00000468117 LRP6O75581 1613 aa26.11■■□□□ 1.77
TMEM53-207ENST00000468117 SPATA31A6Q5VVP1 1343 aa26.11■■□□□ 1.77
TMEM53-207ENST00000468117 IGHDP01880 384 aa26.1■■□□□ 1.77
TMEM53-207ENST00000468117 TTC5Q8N0Z6 440 aa26.1■■□□□ 1.77
TMEM53-207ENST00000468117 ZBTB40Q9NUA8 1239 aa26.1■■□□□ 1.77
TMEM53-207ENST00000468117 CCDC9Q9Y3X0 531 aaKnown RBP26.1■■□□□ 1.77
TMEM53-207ENST00000468117 SPATA31A5Q5VU36 1347 aa26.1■■□□□ 1.77
TMEM53-207ENST00000468117 SPATA31A7Q8IWB4 1347 aa26.1■■□□□ 1.77
TMEM53-207ENST00000468117 CHPF2Q9P2E5 772 aa26.1■■□□□ 1.77
TMEM53-207ENST00000468117 ZNF496Q96IT1 587 aaPredicted RBP26.09■■□□□ 1.77
TMEM53-207ENST00000468117 THRAP3Q9Y2W1 955 aaKnown RBP26.09■■□□□ 1.77
TMEM53-207ENST00000468117 EXOC5O00471 708 aa26.09■■□□□ 1.77
TMEM53-207ENST00000468117 ZBTB7BO15156 539 aaPredicted RBP26.09■■□□□ 1.77
TMEM53-207ENST00000468117 CHMP4AQ9BY43 222 aa26.09■■□□□ 1.77
TMEM53-207ENST00000468117 F6X3S4 739 aa26.08■■□□□ 1.77
TMEM53-207ENST00000468117 FKBP5Q13451 457 aaPredicted RBP26.08■■□□□ 1.77
TMEM53-207ENST00000468117 UNC5CLQ8IV45 518 aa26.08■■□□□ 1.77
TMEM53-207ENST00000468117 INTS3Q68E01 1043 aaKnown RBP26.07■■□□□ 1.76
TMEM53-207ENST00000468117 PHAXQ9H814 394 aaKnown RBP26.07■■□□□ 1.76
TMEM53-207ENST00000468117 ITGB4P16144 1822 aa26.07■■□□□ 1.76
TMEM53-207ENST00000468117 BCL9LQ86UU0 1499 aa26.07■■□□□ 1.76
TMEM53-207ENST00000468117 TNS2Q63HR2 1409 aa26.07■■□□□ 1.76
TMEM53-207ENST00000468117 CDCA7Q9BWT1 371 aaPredicted RBP26.06■■□□□ 1.76
TMEM53-207ENST00000468117 UBR2Q8IWV8 1755 aa26.06■■□□□ 1.76
TMEM53-207ENST00000468117 PAPPAQ13219 1627 aa26.05■■□□□ 1.76
TMEM53-207ENST00000468117 ANXA1P04083 346 aa26.05■■□□□ 1.76
TMEM53-207ENST00000468117 FMNL2Q96PY5 1086 aa26.05■■□□□ 1.76
TMEM53-207ENST00000468117 SLC4A10Q6U841 1118 aa26.04■■□□□ 1.76
TMEM53-207ENST00000468117 DBF4Q9UBU7 674 aaPredicted RBP26.04■■□□□ 1.76
TMEM53-207ENST00000468117 GLI3P10071 1580 aa26.03■■□□□ 1.76
TMEM53-207ENST00000468117 CHMP4BQ9H444 224 aaKnown RBP26.03■■□□□ 1.76
TMEM53-207ENST00000468117 DDB1Q16531 1140 aa26.02■■□□□ 1.76
TMEM53-207ENST00000468117 SKAP1Q86WV1 359 aa26.02■■□□□ 1.76
TMEM53-207ENST00000468117 FNBP4Q8N3X1 1017 aaPredicted RBP26.02■■□□□ 1.76
TMEM53-207ENST00000468117 SNRPA1P09661 255 aaKnown RBP26.02■■□□□ 1.76
TMEM53-207ENST00000468117 TMOD3Q9NYL9 352 aa26.02■■□□□ 1.76
TMEM53-207ENST00000468117 PROSER3Q2NL68 480 aa26.01■■□□□ 1.75
TMEM53-207ENST00000468117 BARGINQ6ZT62 677 aa26.01■■□□□ 1.75
TMEM53-207ENST00000468117 C1orf115Q9H7X2 142 aa26■■□□□ 1.75
TMEM53-207ENST00000468117 N4BP2Q86UW6 1770 aaPredicted RBP26■■□□□ 1.75
TMEM53-207ENST00000468117 VPS72Q15906 364 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms