RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 ZNF592Q92610 1267 aa7.66□□□□□ -1.18
CLK1-206ENST00000461326 AMPD1P23109 780 aa7.65□□□□□ -1.18
CLK1-206ENST00000461326 MCCD1P59942 119 aaPredicted RBP7.65□□□□□ -1.18
CLK1-206ENST00000461326 LBRQ14739 615 aaKnown RBP7.65□□□□□ -1.18
CLK1-206ENST00000461326 GRIN2CQ14957 1233 aa7.65□□□□□ -1.18
CLK1-206ENST00000461326 KRTAP4-8Q9BYQ9 185 aa7.65□□□□□ -1.18
CLK1-206ENST00000461326 ARHGEF10LQ9HCE6 1279 aa7.65□□□□□ -1.18
CLK1-206ENST00000461326 COL8A1P27658 744 aa7.64□□□□□ -1.19
CLK1-206ENST00000461326 RFC5P40937 340 aa7.64□□□□□ -1.19
CLK1-206ENST00000461326 IL27Q8NEV9 243 aa7.64□□□□□ -1.19
CLK1-206ENST00000461326 GPAMQ9HCL2 828 aa7.64□□□□□ -1.19
CLK1-206ENST00000461326 A0A1B0GTH6 734 aa7.63□□□□□ -1.19
CLK1-206ENST00000461326 CSB-PGBD3P0DP91 1061 aa7.63□□□□□ -1.19
CLK1-206ENST00000461326 GTF2E1P29083 439 aaPredicted RBP7.63□□□□□ -1.19
CLK1-206ENST00000461326 PGBD3Q8N328 593 aa7.63□□□□□ -1.19
CLK1-206ENST00000461326 TRIM34Q9BYJ4 488 aa7.63□□□□□ -1.19
CLK1-206ENST00000461326 GOPCQ9HD26 462 aa7.63□□□□□ -1.19
CLK1-206ENST00000461326 PCDHB11Q9Y5F2 797 aa7.63□□□□□ -1.19
CLK1-206ENST00000461326 FBXO45P0C2W1 286 aa7.62□□□□□ -1.19
CLK1-206ENST00000461326 BMP4P12644 408 aa7.62□□□□□ -1.19
CLK1-206ENST00000461326 SCTRP47872 440 aa7.62□□□□□ -1.19
CLK1-206ENST00000461326 C1orf229Q6ZS94 237 aaPredicted RBP7.62□□□□□ -1.19
CLK1-206ENST00000461326 FAM117AQ9C073 453 aa7.62□□□□□ -1.19
CLK1-206ENST00000461326 OSBPL3Q9H4L5 887 aa7.62□□□□□ -1.19
CLK1-206ENST00000461326 ZNF330Q9Y3S2 320 aaPredicted RBP7.62□□□□□ -1.19
CLK1-206ENST00000461326 GNB5O14775 395 aa7.61□□□□□ -1.19
CLK1-206ENST00000461326 TRAK2O60296 914 aa7.61□□□□□ -1.19
CLK1-206ENST00000461326 GNRH1P01148 92 aa7.61□□□□□ -1.19
CLK1-206ENST00000461326 GNASQ5JWF2 1037 aa7.61□□□□□ -1.19
CLK1-206ENST00000461326 PSMG3-AS1Q96PY0 264 aa7.61□□□□□ -1.19
CLK1-206ENST00000461326 ESYT1Q9BSJ8 1104 aa7.61□□□□□ -1.19
CLK1-206ENST00000461326 NOP53Q9NZM5 478 aaKnown RBP7.61□□□□□ -1.19
CLK1-206ENST00000461326 ATXN7L1Q9ULK2 861 aaPredicted RBP7.61□□□□□ -1.19
CLK1-206ENST00000461326 THBS1P07996 1170 aa7.6□□□□□ -1.19
CLK1-206ENST00000461326 PHKA2P46019 1235 aa7.6□□□□□ -1.19
CLK1-206ENST00000461326 TMEM259Q4ZIN3 620 aa7.6□□□□□ -1.19
CLK1-206ENST00000461326 EFHC2Q5JST6 749 aa7.6□□□□□ -1.19
CLK1-206ENST00000461326 SLCO4C1Q6ZQN7 724 aa7.6□□□□□ -1.19
CLK1-206ENST00000461326 CNKSR1Q969H4 720 aa7.6□□□□□ -1.19
CLK1-206ENST00000461326 ZSCAN10Q96SZ4 725 aaPredicted RBP7.6□□□□□ -1.19
CLK1-206ENST00000461326 RAB6BQ9NRW1 208 aa7.6□□□□□ -1.19
CLK1-206ENST00000461326 CENPCQ03188 943 aa7.59□□□□□ -1.19
CLK1-206ENST00000461326 LINC00114Q6XXX2 140 aa7.59□□□□□ -1.19
CLK1-206ENST00000461326 SUV39H2Q9H5I1 410 aa7.59□□□□□ -1.19
CLK1-206ENST00000461326 C1QTNF9BB2RNN3 333 aa7.58□□□□□ -1.2
CLK1-206ENST00000461326 MYCP01106 439 aaPredicted RBP7.58□□□□□ -1.2
CLK1-206ENST00000461326 TMEM214Q6NUQ4 689 aaKnown RBP7.58□□□□□ -1.2
CLK1-206ENST00000461326 GGA1Q9UJY5 639 aa7.58□□□□□ -1.2
CLK1-206ENST00000461326 IL2RAP01589 272 aa7.57□□□□□ -1.2
CLK1-206ENST00000461326 FGFR3P22607 806 aa7.57□□□□□ -1.2
CLK1-206ENST00000461326 NR1H3Q13133 447 aa7.57□□□□□ -1.2
CLK1-206ENST00000461326 UBAP2LQ14157 1087 aaKnown RBP7.57□□□□□ -1.2
CLK1-206ENST00000461326 RUBCNLQ9H714 662 aa7.57□□□□□ -1.2
CLK1-206ENST00000461326 HOXB4P17483 251 aaPredicted RBP7.56□□□□□ -1.2
CLK1-206ENST00000461326 CD163Q86VB7 1156 aa7.56□□□□□ -1.2
CLK1-206ENST00000461326 ABHD17AQ96GS6 310 aa7.56□□□□□ -1.2
CLK1-206ENST00000461326 EPXP11678 715 aa7.55□□□□□ -1.2
CLK1-206ENST00000461326 MSX1P28360 303 aa7.55□□□□□ -1.2
CLK1-206ENST00000461326 ESCO1Q5FWF5 840 aa7.55□□□□□ -1.2
CLK1-206ENST00000461326 BTBD6Q96KE9 485 aa7.55□□□□□ -1.2
CLK1-206ENST00000461326 C2CD2LO14523 706 aa7.54□□□□□ -1.2
CLK1-206ENST00000461326 ARAFP10398 606 aa7.54□□□□□ -1.2
CLK1-206ENST00000461326 DGKGP49619 791 aa7.54□□□□□ -1.2
CLK1-206ENST00000461326 C4orf17Q53FE4 359 aa7.54□□□□□ -1.2
CLK1-206ENST00000461326 XAGE2Q96GT9 111 aa7.54□□□□□ -1.2
CLK1-206ENST00000461326 GJD4Q96KN9 370 aaPredicted RBP7.54□□□□□ -1.2
CLK1-206ENST00000461326 PCMTD1Q96MG8 357 aaPredicted RBP7.54□□□□□ -1.2
CLK1-206ENST00000461326 HRH3Q9Y5N1 445 aa7.54□□□□□ -1.2
CLK1-206ENST00000461326 CHRNA4P43681 627 aa7.53□□□□□ -1.2
CLK1-206ENST00000461326 CTBSQ01459 385 aa7.53□□□□□ -1.2
CLK1-206ENST00000461326 FIGNL1Q6PIW4 674 aa7.53□□□□□ -1.2
CLK1-206ENST00000461326 RNF135Q8IUD6 432 aa7.53□□□□□ -1.2
CLK1-206ENST00000461326 FHDC1Q9C0D6 1143 aaPredicted RBP7.53□□□□□ -1.2
CLK1-206ENST00000461326 SEMA6BQ9H3T3 888 aa7.53□□□□□ -1.2
CLK1-206ENST00000461326 NDFIP2Q9NV92 336 aa7.53□□□□□ -1.2
CLK1-206ENST00000461326 BNIP3LO60238 219 aa7.52□□□□□ -1.21
CLK1-206ENST00000461326 RHBDD1Q8TEB9 315 aa7.52□□□□□ -1.21
CLK1-206ENST00000461326 CRISPLD1Q9H336 500 aa7.52□□□□□ -1.21
CLK1-206ENST00000461326 NEURL1BA8MQ27 555 aa7.51□□□□□ -1.21
CLK1-206ENST00000461326 FLIIQ13045 1269 aa7.51□□□□□ -1.21
CLK1-206ENST00000461326 ZMYM1Q5SVZ6 1142 aa7.51□□□□□ -1.21
CLK1-206ENST00000461326 DOC2BQ14184 412 aa7.5□□□□□ -1.21
CLK1-206ENST00000461326 CHSY3Q70JA7 882 aa7.5□□□□□ -1.21
CLK1-206ENST00000461326 ADH6P28332 368 aa7.49□□□□□ -1.21
CLK1-206ENST00000461326 GATA4P43694 442 aa7.49□□□□□ -1.21
CLK1-206ENST00000461326 TBC1D9Q6ZT07 1266 aa7.49□□□□□ -1.21
CLK1-206ENST00000461326 KRTAP9-2Q9BYQ4 174 aa7.49□□□□□ -1.21
CLK1-206ENST00000461326 PCDHGC4Q9Y5F7 938 aa7.49□□□□□ -1.21
CLK1-206ENST00000461326 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.48□□□□□ -1.21
CLK1-206ENST00000461326 TLR1Q15399 786 aa7.48□□□□□ -1.21
CLK1-206ENST00000461326 PPARGC1BQ86YN6 1023 aaKnown RBP7.48□□□□□ -1.21
CLK1-206ENST00000461326 C1orf216Q8TAB5 229 aa7.48□□□□□ -1.21
CLK1-206ENST00000461326 AVENQ9NQS1 362 aaPredicted RBP7.48□□□□□ -1.21
CLK1-206ENST00000461326 SPATA31C1P0DKV0 1188 aa7.47□□□□□ -1.21
CLK1-206ENST00000461326 ITGB7P26010 798 aa7.47□□□□□ -1.21
CLK1-206ENST00000461326 PLA2G4AP47712 749 aa7.47□□□□□ -1.21
CLK1-206ENST00000461326 NLRP8Q86W28 1048 aa7.47□□□□□ -1.21
CLK1-206ENST00000461326 ZCCHC2Q9C0B9 1178 aaKnown RBP7.47□□□□□ -1.21
CLK1-206ENST00000461326 NDUFB9Q9Y6M9 179 aa7.47□□□□□ -1.21
CLK1-206ENST00000461326 SCO2A0A1W2PP80 73 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms