RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 GMPRP36959 345 aa6.26□□□□□ -1.41
RBM39-220ENST00000455343 PPP1R26Q5T8A7 1209 aaPredicted RBP6.26□□□□□ -1.41
RBM39-220ENST00000455343 EPS8L1Q8TE68 723 aa6.26□□□□□ -1.41
RBM39-220ENST00000455343 CDV3Q9UKY7 258 aaKnown RBP6.26□□□□□ -1.41
RBM39-220ENST00000455343 GPSM3Q9Y4H4 160 aa6.26□□□□□ -1.41
RBM39-220ENST00000455343 MAN1A2O60476 641 aa6.25□□□□□ -1.41
RBM39-220ENST00000455343 RFC5P40937 340 aa6.25□□□□□ -1.41
RBM39-220ENST00000455343 PTK2Q05397 1052 aa6.25□□□□□ -1.41
RBM39-220ENST00000455343 EFCAB2Q5VUJ9 269 aa6.25□□□□□ -1.41
RBM39-220ENST00000455343 ZBTB33Q86T24 672 aa6.25□□□□□ -1.41
RBM39-220ENST00000455343 KCTD15Q96SI1 283 aaPredicted RBP6.25□□□□□ -1.41
RBM39-220ENST00000455343 STRCQ7RTU9 1775 aa6.25□□□□□ -1.41
RBM39-220ENST00000455343 TRAPPC8Q9Y2L5 1435 aa6.25□□□□□ -1.41
RBM39-220ENST00000455343 SOS2Q07890 1332 aaPredicted RBP6.25□□□□□ -1.41
RBM39-220ENST00000455343 AFAP1Q8N556 730 aa6.24□□□□□ -1.41
RBM39-220ENST00000455343 ADAM32Q8TC27 787 aa6.24□□□□□ -1.41
RBM39-220ENST00000455343 TSEN34Q9BSV6 310 aaKnown RBP6.24□□□□□ -1.41
RBM39-220ENST00000455343 GOPCQ9HD26 462 aa6.24□□□□□ -1.41
RBM39-220ENST00000455343 PGPEP1Q9NXJ5 209 aa6.24□□□□□ -1.41
RBM39-220ENST00000455343 NCOA1Q15788 1441 aa6.24□□□□□ -1.41
RBM39-220ENST00000455343 CFAP74Q9C0B2 1584 aa6.23□□□□□ -1.41
RBM39-220ENST00000455343 DHX9Q08211 1270 aaKnown RBP6.23□□□□□ -1.41
RBM39-220ENST00000455343 CBLBQ13191 982 aa6.23□□□□□ -1.41
RBM39-220ENST00000455343 INTS6LQ5JSJ4 861 aaKnown RBP6.23□□□□□ -1.41
RBM39-220ENST00000455343 Q6ZVU0 165 aa6.23□□□□□ -1.41
RBM39-220ENST00000455343 PNMA1Q8ND90 353 aa6.23□□□□□ -1.41
RBM39-220ENST00000455343 PCMTD1Q96MG8 357 aaPredicted RBP6.23□□□□□ -1.41
RBM39-220ENST00000455343 DNMT3LQ9UJW3 386 aa6.23□□□□□ -1.41
RBM39-220ENST00000455343 PREX1Q8TCU6 1659 aa6.23□□□□□ -1.41
RBM39-220ENST00000455343 ZNF518AQ6AHZ1 1483 aa6.22□□□□□ -1.41
RBM39-220ENST00000455343 VSIG8P0DPA2 414 aa6.22□□□□□ -1.41
RBM39-220ENST00000455343 NEUROD2Q15784 382 aa6.22□□□□□ -1.41
RBM39-220ENST00000455343 MLH3Q9UHC1 1453 aa6.22□□□□□ -1.41
RBM39-220ENST00000455343 FER1L4A9Z1Z3 1794 aa6.21□□□□□ -1.41
RBM39-220ENST00000455343 AGLP35573 1532 aa6.21□□□□□ -1.42
RBM39-220ENST00000455343 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.42
RBM39-220ENST00000455343 NBPF20Q3BBV1 942 aa6.21□□□□□ -1.42
RBM39-220ENST00000455343 TRIM34Q9BYJ4 488 aa6.21□□□□□ -1.42
RBM39-220ENST00000455343 KDM5CP41229 1560 aa6.21□□□□□ -1.42
RBM39-220ENST00000455343 REREQ9P2R6 1566 aa6.21□□□□□ -1.42
RBM39-220ENST00000455343 ZNF335Q9H4Z2 1342 aaPredicted RBP6.21□□□□□ -1.42
RBM39-220ENST00000455343 NPATQ14207 1427 aa6.2□□□□□ -1.42
RBM39-220ENST00000455343 TTLL8A6PVC2 850 aa6.2□□□□□ -1.42
RBM39-220ENST00000455343 UBAP1LF5GYI3 381 aa6.2□□□□□ -1.42
RBM39-220ENST00000455343 SPINT1O43278 529 aa6.2□□□□□ -1.42
RBM39-220ENST00000455343 PPFIA3O75145 1194 aa6.2□□□□□ -1.42
RBM39-220ENST00000455343 RANGAP1P46060 587 aaPredicted RBP6.2□□□□□ -1.42
RBM39-220ENST00000455343 CDK13Q14004 1512 aaKnown RBP6.2□□□□□ -1.42
RBM39-220ENST00000455343 CNTLNQ9NXG0 1405 aa6.19□□□□□ -1.42
RBM39-220ENST00000455343 SETD1BQ9UPS6 1966 aaKnown RBP6.19□□□□□ -1.42
RBM39-220ENST00000455343 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.19□□□□□ -1.421e-35■□□□□ 8.9
RBM39-220ENST00000455343 TMEM259Q4ZIN3 620 aa6.19□□□□□ -1.42
RBM39-220ENST00000455343 ZSCAN1Q8NBB4 408 aa6.19□□□□□ -1.42
RBM39-220ENST00000455343 ESF1Q9H501 851 aaKnown RBP6.19□□□□□ -1.42
RBM39-220ENST00000455343 CDK11AQ9UQ88 783 aaPredicted RBP6.19□□□□□ -1.42
RBM39-220ENST00000455343 ZMYM3Q14202 1370 aa6.18□□□□□ -1.42
RBM39-220ENST00000455343 DIP2CQ9Y2E4 1556 aa6.18□□□□□ -1.42
RBM39-220ENST00000455343 PLA2R1Q13018 1463 aa6.18□□□□□ -1.42
RBM39-220ENST00000455343 TCOF1Q13428 1488 aaKnown RBP6.18□□□□□ -1.42
RBM39-220ENST00000455343 ESPNB1AK53 854 aa6.18□□□□□ -1.42
RBM39-220ENST00000455343 BRPF1P55201 1214 aaPredicted RBP6.18□□□□□ -1.42
RBM39-220ENST00000455343 DZIP3Q86Y13 1208 aaKnown RBP6.18□□□□□ -1.42
RBM39-220ENST00000455343 IL27Q8NEV9 243 aa6.18□□□□□ -1.42
RBM39-220ENST00000455343 GJD4Q96KN9 370 aaPredicted RBP6.18□□□□□ -1.42
RBM39-220ENST00000455343 AGBL1Q96MI9 1066 aa6.18□□□□□ -1.42
RBM39-220ENST00000455343 TMPRSS4Q9NRS4 437 aa6.18□□□□□ -1.42
RBM39-220ENST00000455343 TROQ12816 1431 aaPredicted RBP6.17□□□□□ -1.42
RBM39-220ENST00000455343 EEA1Q15075 1411 aa6.17□□□□□ -1.42
RBM39-220ENST00000455343 HSPA1LP34931 641 aa6.17□□□□□ -1.42
RBM39-220ENST00000455343 RAB15P59190 212 aa6.17□□□□□ -1.42
RBM39-220ENST00000455343 ZNF784Q8NCA9 323 aaPredicted RBP6.17□□□□□ -1.42
RBM39-220ENST00000455343 CAMSAP1Q5T5Y3 1602 aa6.17□□□□□ -1.42
RBM39-220ENST00000455343 FAM181BA6NEQ2 426 aa6.16□□□□□ -1.42
RBM39-220ENST00000455343 FIGNL2A6NMB9 653 aa6.16□□□□□ -1.42
RBM39-220ENST00000455343 ERVH48-1M5A8F1 160 aa6.16□□□□□ -1.42
RBM39-220ENST00000455343 RELBQ01201 579 aa6.16□□□□□ -1.42
RBM39-220ENST00000455343 PTSQ03393 145 aa6.16□□□□□ -1.42
RBM39-220ENST00000455343 FMN1Q68DA7 1419 aa6.16□□□□□ -1.42
RBM39-220ENST00000455343 C3P01024 1663 aa6.15□□□□□ -1.42
RBM39-220ENST00000455343 ZBBXA8MT70 800 aa6.15□□□□□ -1.42
RBM39-220ENST00000455343 TOM1O60784 492 aa6.15□□□□□ -1.42
RBM39-220ENST00000455343 LILRA1O75019 489 aa6.15□□□□□ -1.42
RBM39-220ENST00000455343 ADH1AP07327 375 aa6.15□□□□□ -1.42
RBM39-220ENST00000455343 CTSOP43234 321 aaPredicted RBP6.15□□□□□ -1.42
RBM39-220ENST00000455343 SEPT12Q8IYM1 358 aa6.15□□□□□ -1.42
RBM39-220ENST00000455343 INSM2Q96T92 566 aaPredicted RBP6.15□□□□□ -1.42
RBM39-220ENST00000455343 PTPRKQ15262 1439 aa6.15□□□□□ -1.43
RBM39-220ENST00000455343 ARHGAP5Q13017 1502 aa6.15□□□□□ -1.43
RBM39-220ENST00000455343 ABCA6Q8N139 1617 aa6.14□□□□□ -1.43
RBM39-220ENST00000455343 FBXO45P0C2W1 286 aa6.14□□□□□ -1.43
RBM39-220ENST00000455343 ADD1P35611 737 aaKnown RBP6.14□□□□□ -1.43
RBM39-220ENST00000455343 SLC35F4A4IF30 521 aa6.13□□□□□ -1.43
RBM39-220ENST00000455343 CCDC155Q8N6L0 562 aa6.13□□□□□ -1.43
RBM39-220ENST00000455343 KDF1Q8NAX2 398 aaPredicted RBP6.13□□□□□ -1.43
RBM39-220ENST00000455343 RNF217Q8TC41 542 aa6.13□□□□□ -1.43
RBM39-220ENST00000455343 ZNF395Q9H8N7 513 aaPredicted RBP6.13□□□□□ -1.43
RBM39-220ENST00000455343 POLMQ9NP87 494 aaPredicted RBP6.13□□□□□ -1.43
RBM39-220ENST00000455343 PCDHB9Q9Y5E1 797 aa6.13□□□□□ -1.43
RBM39-220ENST00000455343 CLIP1P30622 1438 aa6.13□□□□□ -1.43
RBM39-220ENST00000455343 ABCC1P33527 1531 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms