RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 FSD2A1L4K1 749 aa7.76□□□□□ -1.17
USP46-201ENST00000441222 PABPN1LA6NDY0 278 aaKnown RBP7.76□□□□□ -1.17
USP46-201ENST00000441222 SH2B1Q9NRF2 756 aaPredicted RBP7.76□□□□□ -1.17
USP46-201ENST00000441222 CAVIN2O95810 425 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 AMPD3Q01432 767 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 GAPVD1Q14C86 1478 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 A0A087WZG4 1122 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 GSDMDP57764 484 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 CUL5Q93034 780 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 FGD6Q6ZV73 1430 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 AACSQ86V21 672 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 CCDC172P0C7W6 258 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 IQCA1Q86XH1 822 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 AIDAQ96BJ3 306 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 TSNARE1Q96NA8 513 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 FAM177BA6PVY3 158 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 SPECC1Q5M775 1068 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 ALS2CR12Q96Q35 445 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 CCDC113Q9H0I3 377 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 CABP2Q9NPB3 220 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 ADAMTS8Q9UP79 889 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 CTNNA2P26232 953 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 CAVIN4Q5BKX8 364 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 ESCO1Q5FWF5 840 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 KIF1BPQ96EK5 621 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 JAKMIP1Q96N16 626 aaKnown RBP7.75□□□□□ -1.17
USP46-201ENST00000441222 DDX23Q9BUQ8 820 aaKnown RBP7.75□□□□□ -1.17
USP46-201ENST00000441222 HOMER2Q9NSB8 354 aa7.75□□□□□ -1.17
USP46-201ENST00000441222 FANCD2Q9BXW9 1451 aa7.74□□□□□ -1.17
USP46-201ENST00000441222 ESPNB1AK53 854 aa7.74□□□□□ -1.17
USP46-201ENST00000441222 GLRX3O76003 335 aaKnown RBP7.74□□□□□ -1.17
USP46-201ENST00000441222 CCDC183Q5T5S1 534 aa7.74□□□□□ -1.17
USP46-201ENST00000441222 FAM114A1Q8IWE2 563 aa7.74□□□□□ -1.17
USP46-201ENST00000441222 RPAP2Q8IXW5 612 aaPredicted RBP7.74□□□□□ -1.17
USP46-201ENST00000441222 THEMISQ8N1K5 641 aaPredicted RBP7.74□□□□□ -1.17
USP46-201ENST00000441222 TMEM87AQ8NBN3 555 aa7.74□□□□□ -1.17
USP46-201ENST00000441222 CCDC12Q8WUD4 166 aaPredicted RBP7.74□□□□□ -1.17
USP46-201ENST00000441222 CGNQ9P2M7 1197 aaKnown RBP7.74□□□□□ -1.17
USP46-201ENST00000441222 KANK3Q6NY19 840 aa7.74□□□□□ -1.17
USP46-201ENST00000441222 FERMT2Q96AC1 680 aa7.74□□□□□ -1.17
USP46-201ENST00000441222 DRC1Q96MC2 740 aa7.74□□□□□ -1.17
USP46-201ENST00000441222 TOP1P11387 765 aaKnown RBP7.74□□□□□ -1.17
USP46-201ENST00000441222 RNF41Q9H4P4 317 aaPredicted RBP7.74□□□□□ -1.17
USP46-201ENST00000441222 SSX2IPQ9Y2D8 614 aa7.74□□□□□ -1.17
USP46-201ENST00000441222 MVPQ14764 893 aaKnown RBP7.74□□□□□ -1.17
USP46-201ENST00000441222 KIF4BQ2VIQ3 1234 aa7.74□□□□□ -1.17
USP46-201ENST00000441222 TOM1L2Q6ZVM7 507 aa7.74□□□□□ -1.17
USP46-201ENST00000441222 SRGAP3O43295 1099 aa7.74□□□□□ -1.17
USP46-201ENST00000441222 EXOSC9Q06265 439 aaKnown RBP7.74□□□□□ -1.17
USP46-201ENST00000441222 MPHOSPH6Q99547 160 aaKnown RBP7.74□□□□□ -1.17
USP46-201ENST00000441222 LRRC27Q9C0I9 530 aa7.74□□□□□ -1.17
USP46-201ENST00000441222 BAG4O95429 457 aaKnown RBP7.74□□□□□ -1.17
USP46-201ENST00000441222 USP5P45974 858 aa7.74□□□□□ -1.17
USP46-201ENST00000441222 ZSCAN30Q86W11 494 aa7.74□□□□□ -1.17
USP46-201ENST00000441222 EHBP1Q8NDI1 1231 aa7.74□□□□□ -1.17
USP46-201ENST00000441222 MKNK2Q9HBH9 465 aa7.74□□□□□ -1.17
USP46-201ENST00000441222 CTCFLQ8NI51 663 aaPredicted RBP7.73□□□□□ -1.17
USP46-201ENST00000441222 PIBF1Q8WXW3 757 aa7.73□□□□□ -1.17
USP46-201ENST00000441222 RAI14Q9P0K7 980 aa7.73□□□□□ -1.17
USP46-201ENST00000441222 CYB5RLQ6IPT4 315 aa7.73□□□□□ -1.17
USP46-201ENST00000441222 YEATS4O95619 227 aa7.73□□□□□ -1.17
USP46-201ENST00000441222 ZNF530Q6P9A1 599 aaPredicted RBP7.73□□□□□ -1.17
USP46-201ENST00000441222 ACTN2P35609 894 aa7.73□□□□□ -1.17
USP46-201ENST00000441222 RBM10P98175 930 aaKnown RBP7.73□□□□□ -1.17
USP46-201ENST00000441222 CCDC178Q5BJE1 867 aa7.73□□□□□ -1.17
USP46-201ENST00000441222 GOPCQ9HD26 462 aa7.73□□□□□ -1.17
USP46-201ENST00000441222 COMMD10Q9Y6G5 202 aa7.73□□□□□ -1.17
USP46-201ENST00000441222 BTBD11A6QL63 1104 aa7.73□□□□□ -1.17
USP46-201ENST00000441222 SIL1Q9H173 461 aa7.73□□□□□ -1.17
USP46-201ENST00000441222 TUBB4BP68371 445 aa7.73□□□□□ -1.17
USP46-201ENST00000441222 IFIT1P09914 478 aaKnown RBP7.73□□□□□ -1.17
USP46-201ENST00000441222 MCM4P33991 863 aa7.73□□□□□ -1.17
USP46-201ENST00000441222 PPM1FP49593 454 aaPredicted RBP7.73□□□□□ -1.17
USP46-201ENST00000441222 TRAF1Q13077 416 aa7.73□□□□□ -1.17
USP46-201ENST00000441222 TTC12Q9H892 705 aaPredicted RBP7.73□□□□□ -1.17
USP46-201ENST00000441222 STRN4Q9NRL3 753 aa7.73□□□□□ -1.17
USP46-201ENST00000441222 PPP2R1AP30153 589 aa7.72□□□□□ -1.17
USP46-201ENST00000441222 FAM69CQ0P6D2 419 aa7.72□□□□□ -1.17
USP46-201ENST00000441222 SLC52A1Q9NWF4 448 aa7.72□□□□□ -1.17
USP46-201ENST00000441222 PPP1R1BQ9UD71 204 aaPredicted RBP7.72□□□□□ -1.17
USP46-201ENST00000441222 IKBKGQ9Y6K9 419 aa7.72□□□□□ -1.17
USP46-201ENST00000441222 CASTP20810 708 aaKnown RBP7.72□□□□□ -1.17
USP46-201ENST00000441222 SULT6B1Q6IMI4 303 aa7.72□□□□□ -1.17
USP46-201ENST00000441222 CWC27Q6UX04 472 aaKnown RBP7.72□□□□□ -1.17
USP46-201ENST00000441222 SCLT1Q96NL6 688 aa7.72□□□□□ -1.17
USP46-201ENST00000441222 CRACR2BQ8N4Y2 399 aaPredicted RBP7.72□□□□□ -1.17
USP46-201ENST00000441222 NAPBQ9H115 298 aa7.72□□□□□ -1.17
USP46-201ENST00000441222 SYNJ2O15056 1496 aa7.72□□□□□ -1.17
USP46-201ENST00000441222 ATAD2Q6PL18 1390 aa7.72□□□□□ -1.17
USP46-201ENST00000441222 TXNDC2Q86VQ3 553 aa7.72□□□□□ -1.17
USP46-201ENST00000441222 PROSER2Q86WR7 435 aaPredicted RBP7.72□□□□□ -1.17
USP46-201ENST00000441222 CALML4Q96GE6 196 aa7.72□□□□□ -1.17
USP46-201ENST00000441222 C8orf76Q96K31 380 aa7.72□□□□□ -1.17
USP46-201ENST00000441222 DAPK1P53355 1430 aa7.72□□□□□ -1.17
USP46-201ENST00000441222 GOLIM4O00461 696 aa7.72□□□□□ -1.17
USP46-201ENST00000441222 POLR3DP05423 398 aaPredicted RBP7.72□□□□□ -1.17
USP46-201ENST00000441222 MAP3K12Q12852 859 aa7.72□□□□□ -1.17
USP46-201ENST00000441222 NUTM2GQ5VZR2 741 aa7.72□□□□□ -1.17
USP46-201ENST00000441222 USP37Q86T82 979 aa7.72□□□□□ -1.17
USP46-201ENST00000441222 CTNNBL1Q8WYA6 563 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms