RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 BTBD11A6QL63 1104 aa24.45■■□□□ 1.51
SNX17-203ENST00000440760 BABAM1Q9NWV8 329 aa24.45■■□□□ 1.51
SNX17-203ENST00000440760 ATF7IPQ6VMQ6 1270 aa24.45■■□□□ 1.5
SNX17-203ENST00000440760 NWD2Q9ULI1 1742 aa24.44■■□□□ 1.5
SNX17-203ENST00000440760 PCDH11XQ9BZA7 1347 aa24.44■■□□□ 1.5
SNX17-203ENST00000440760 PCDH11YQ9BZA8 1340 aa24.44■■□□□ 1.5
SNX17-203ENST00000440760 FTSJ3Q8IY81 847 aaKnown RBP24.43■■□□□ 1.5
SNX17-203ENST00000440760 MRC1P22897 1456 aa24.43■■□□□ 1.5
SNX17-203ENST00000440760 DZIP1LQ8IYY4 767 aaKnown RBP24.43■■□□□ 1.5
SNX17-203ENST00000440760 DISP2A7MBM2 1401 aa24.43■■□□□ 1.5
SNX17-203ENST00000440760 BRPF1P55201 1214 aaPredicted RBP24.42■■□□□ 1.5
SNX17-203ENST00000440760 LRP6O75581 1613 aa24.42■■□□□ 1.5
SNX17-203ENST00000440760 SLIT2O94813 1529 aa24.42■■□□□ 1.5
SNX17-203ENST00000440760 HSPA1LP34931 641 aa24.41■■□□□ 1.5
SNX17-203ENST00000440760 EIF4A1P60842 406 aaKnown RBP24.41■■□□□ 1.5
SNX17-203ENST00000440760 DDX54Q8TDD1 881 aaKnown RBP24.41■■□□□ 1.5
SNX17-203ENST00000440760 NECTIN2Q92692 538 aa24.41■■□□□ 1.5
SNX17-203ENST00000440760 DCAF5Q96JK2 942 aa24.41■■□□□ 1.5
SNX17-203ENST00000440760 SLC52A2Q9HAB3 445 aa24.41■■□□□ 1.5
SNX17-203ENST00000440760 TOGARAM1Q9Y4F4 1720 aa24.39■■□□□ 1.5
SNX17-203ENST00000440760 IPO8O15397 1037 aaKnown RBP24.39■■□□□ 1.49
SNX17-203ENST00000440760 NFATC2IPQ8NCF5 419 aa24.38■■□□□ 1.49
SNX17-203ENST00000440760 C8orf37Q96NL8 207 aa24.38■■□□□ 1.49
SNX17-203ENST00000440760 HSP90AB1P08238 724 aaKnown RBP24.38■■□□□ 1.49
SNX17-203ENST00000440760 SLC39A6Q13433 755 aa24.37■■□□□ 1.49
SNX17-203ENST00000440760 MVPQ14764 893 aaKnown RBP24.37■■□□□ 1.49
SNX17-203ENST00000440760 TMEM57Q8N5G2 664 aa24.37■■□□□ 1.49
SNX17-203ENST00000440760 SPATA31A1Q5TZJ5 1347 aa24.36■■□□□ 1.49
SNX17-203ENST00000440760 SLC4A2P04920 1241 aa24.35■■□□□ 1.49
SNX17-203ENST00000440760 ITPRIPQ8IWB1 547 aa24.35■■□□□ 1.49
SNX17-203ENST00000440760 C5P01031 1676 aa24.35■■□□□ 1.49
SNX17-203ENST00000440760 RGS12O14924 1447 aa24.34■■□□□ 1.49
SNX17-203ENST00000440760 MS4A1P11836 297 aa24.34■■□□□ 1.49
SNX17-203ENST00000440760 CABP4P57796 275 aa24.33■■□□□ 1.49
SNX17-203ENST00000440760 HDGFL1Q5TGJ6 251 aa24.33■■□□□ 1.49
SNX17-203ENST00000440760 G2E3Q7L622 706 aa24.33■■□□□ 1.49
SNX17-203ENST00000440760 ARHGAP45Q92619 1136 aa24.33■■□□□ 1.49
SNX17-203ENST00000440760 CCDC9Q9Y3X0 531 aaKnown RBP24.33■■□□□ 1.49
SNX17-203ENST00000440760 SPATA31A6Q5VVP1 1343 aa24.33■■□□□ 1.48
SNX17-203ENST00000440760 NGLY1Q96IV0 654 aa24.33■■□□□ 1.48
SNX17-203ENST00000440760 PRAMEF22A3QJZ6 481 aa24.32■■□□□ 1.48
SNX17-203ENST00000440760 EIF2S2P20042 333 aaKnown RBP24.32■■□□□ 1.48
SNX17-203ENST00000440760 CCDC30Q5VVM6 783 aa24.32■■□□□ 1.48
SNX17-203ENST00000440760 ZNF790Q6PG37 636 aa24.32■■□□□ 1.48
SNX17-203ENST00000440760 ABCC4O15439 1325 aa24.31■■□□□ 1.48
SNX17-203ENST00000440760 SOS1Q07889 1333 aaPredicted RBP24.31■■□□□ 1.48
SNX17-203ENST00000440760 SPATA31A5Q5VU36 1347 aa24.31■■□□□ 1.48
SNX17-203ENST00000440760 SPATA31A7Q8IWB4 1347 aa24.31■■□□□ 1.48
SNX17-203ENST00000440760 NKX1-1Q15270 411 aaPredicted RBP24.31■■□□□ 1.48
SNX17-203ENST00000440760 STK31Q9BXU1 1019 aa24.31■■□□□ 1.48
SNX17-203ENST00000440760 TNS2Q63HR2 1409 aa24.31■■□□□ 1.48
SNX17-203ENST00000440760 BCL9LQ86UU0 1499 aa24.31■■□□□ 1.48
SNX17-203ENST00000440760 HEG1Q9ULI3 1381 aa24.3■■□□□ 1.48
SNX17-203ENST00000440760 CACNA1FO60840 1977 aa24.3■■□□□ 1.48
SNX17-203ENST00000440760 GLI3P10071 1580 aa24.3■■□□□ 1.48
SNX17-203ENST00000440760 API5Q9BZZ5 524 aaKnown RBP24.29■■□□□ 1.48
SNX17-203ENST00000440760 PAPPAQ13219 1627 aa24.29■■□□□ 1.48
SNX17-203ENST00000440760 UNC5CLQ8IV45 518 aa24.29■■□□□ 1.48
SNX17-203ENST00000440760 GIGYF1O75420 1035 aaPredicted RBP24.28■■□□□ 1.48
SNX17-203ENST00000440760 HOXB7P09629 217 aa24.27■■□□□ 1.48
SNX17-203ENST00000440760 DDX19BQ9UMR2 479 aa24.27■■□□□ 1.48
SNX17-203ENST00000440760 ITGB4P16144 1822 aa24.27■■□□□ 1.48
SNX17-203ENST00000440760 CHPF2Q9P2E5 772 aa24.27■■□□□ 1.48
SNX17-203ENST00000440760 PTPRCP08575 1304 aa24.26■■□□□ 1.47
SNX17-203ENST00000440760 UBR2Q8IWV8 1755 aa24.26■■□□□ 1.47
SNX17-203ENST00000440760 ZNF496Q96IT1 587 aaPredicted RBP24.26■■□□□ 1.47
SNX17-203ENST00000440760 THRAP3Q9Y2W1 955 aaKnown RBP24.26■■□□□ 1.47
SNX17-203ENST00000440760 ERVV-2B6SEH9 535 aa24.25■■□□□ 1.47
SNX17-203ENST00000440760 EXOC5O00471 708 aa24.25■■□□□ 1.47
SNX17-203ENST00000440760 TTC5Q8N0Z6 440 aa24.25■■□□□ 1.47
SNX17-203ENST00000440760 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.25■■□□□ 1.47
SNX17-203ENST00000440760 ANXA1P04083 346 aa24.25■■□□□ 1.47
SNX17-203ENST00000440760 FLIIQ13045 1269 aa24.25■■□□□ 1.47
SNX17-203ENST00000440760 DOT1LQ8TEK3 1739 aa24.24■■□□□ 1.47
SNX17-203ENST00000440760 F6X3S4 739 aa24.24■■□□□ 1.47
SNX17-203ENST00000440760 PCDHB15Q9Y5E8 787 aa24.24■■□□□ 1.47
SNX17-203ENST00000440760 KDM2BQ8NHM5 1336 aa24.24■■□□□ 1.47
SNX17-203ENST00000440760 KAT6BQ8WYB5 2073 aa24.24■■□□□ 1.47
SNX17-203ENST00000440760 MEX3CQ5U5Q3 659 aaKnown RBP24.23■■□□□ 1.47
SNX17-203ENST00000440760 FNBP4Q8N3X1 1017 aaPredicted RBP24.23■■□□□ 1.47
SNX17-203ENST00000440760 PHAXQ9H814 394 aaKnown RBP24.23■■□□□ 1.47
SNX17-203ENST00000440760 KCPQ6ZWJ8 1503 aa24.22■■□□□ 1.47
SNX17-203ENST00000440760 LAMB4A4D0S4 1761 aa24.22■■□□□ 1.47
SNX17-203ENST00000440760 FKBP5Q13451 457 aaPredicted RBP24.22■■□□□ 1.47
SNX17-203ENST00000440760 VPS72Q15906 364 aa24.22■■□□□ 1.47
SNX17-203ENST00000440760 DDB1Q16531 1140 aa24.22■■□□□ 1.47
SNX17-203ENST00000440760 CDCA7Q9BWT1 371 aaPredicted RBP24.22■■□□□ 1.47
SNX17-203ENST00000440760 USP21Q9UK80 565 aa24.22■■□□□ 1.47
SNX17-203ENST00000440760 FAM98CQ17RN3 349 aaKnown RBP24.21■■□□□ 1.47
SNX17-203ENST00000440760 PROSER3Q2NL68 480 aa24.2■■□□□ 1.46
SNX17-203ENST00000440760 TMOD3Q9NYL9 352 aa24.2■■□□□ 1.46
SNX17-203ENST00000440760 IGHDP01880 384 aa24.2■■□□□ 1.46
SNX17-203ENST00000440760 BARGINQ6ZT62 677 aa24.2■■□□□ 1.46
SNX17-203ENST00000440760 FMNL2Q96PY5 1086 aa24.2■■□□□ 1.46
SNX17-203ENST00000440760 SLC4A10Q6U841 1118 aa24.19■■□□□ 1.46
SNX17-203ENST00000440760 SKAP1Q86WV1 359 aa24.19■■□□□ 1.46
SNX17-203ENST00000440760 ZBTB40Q9NUA8 1239 aa24.19■■□□□ 1.46
SNX17-203ENST00000440760 AAMPQ13685 434 aa24.18■■□□□ 1.46
SNX17-203ENST00000440760 N4BP2Q86UW6 1770 aaPredicted RBP24.18■■□□□ 1.46
SNX17-203ENST00000440760 INTS3Q68E01 1043 aaKnown RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 510.9 ms