RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 RASSF4Q9H2L5 321 aa13.38□□□□□ -0.27
PTCH1-209ENST00000437951 KIF20AO95235 890 aa13.38□□□□□ -0.27
PTCH1-209ENST00000437951 A0A1B0GUL7 405 aa13.38□□□□□ -0.27
PTCH1-209ENST00000437951 RAI14Q9P0K7 980 aa13.38□□□□□ -0.27
PTCH1-209ENST00000437951 GOLIM4O00461 696 aa13.38□□□□□ -0.27
PTCH1-209ENST00000437951 HS1BP3Q53T59 392 aa13.38□□□□□ -0.27
PTCH1-209ENST00000437951 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
PTCH1-209ENST00000437951 CCDC121Q6ZUS5 278 aa13.37□□□□□ -0.27
PTCH1-209ENST00000437951 POLA1P09884 1462 aaPredicted RBP13.37□□□□□ -0.27
PTCH1-209ENST00000437951 VGFO15240 615 aaPredicted RBP13.37□□□□□ -0.27
PTCH1-209ENST00000437951 PDRG1Q9NUG6 133 aa13.37□□□□□ -0.27
PTCH1-209ENST00000437951 EBAG9O00559 213 aa13.37□□□□□ -0.27
PTCH1-209ENST00000437951 BLOC1S2Q6QNY1 142 aa13.37□□□□□ -0.27
PTCH1-209ENST00000437951 ZWINTO95229 277 aa13.37□□□□□ -0.27
PTCH1-209ENST00000437951 DHX29Q7Z478 1369 aaKnown RBP13.37□□□□□ -0.27
PTCH1-209ENST00000437951 SH2B1Q9NRF2 756 aaPredicted RBP13.37□□□□□ -0.27
PTCH1-209ENST00000437951 GNL3LQ9NVN8 582 aaKnown RBP13.37□□□□□ -0.27
PTCH1-209ENST00000437951 STX1AQ16623 288 aa13.37□□□□□ -0.27
PTCH1-209ENST00000437951 DDX19AQ9NUU7 478 aaKnown RBP13.37□□□□□ -0.27
PTCH1-209ENST00000437951 RIC3Q7Z5B4 369 aa13.37□□□□□ -0.27
PTCH1-209ENST00000437951 TACC1O75410 805 aa13.36□□□□□ -0.27
PTCH1-209ENST00000437951 SOGA3Q5TF21 947 aa13.36□□□□□ -0.27
PTCH1-209ENST00000437951 RAPGEF2Q9Y4G8 1499 aa13.36□□□□□ -0.27
PTCH1-209ENST00000437951 MIPOL1Q8TD10 442 aa13.36□□□□□ -0.27
PTCH1-209ENST00000437951 AIMP1Q12904 312 aaKnown RBP13.36□□□□□ -0.27
PTCH1-209ENST00000437951 CCDC158Q5M9N0 1113 aa13.36□□□□□ -0.27
PTCH1-209ENST00000437951 LARP1Q6PKG0 1096 aaKnown RBP13.36□□□□□ -0.27
PTCH1-209ENST00000437951 TSNARE1Q96NA8 513 aa13.36□□□□□ -0.27
PTCH1-209ENST00000437951 FAM184BQ9ULE4 1060 aa13.36□□□□□ -0.27
PTCH1-209ENST00000437951 IKQ13123 557 aaPredicted RBP13.36□□□□□ -0.27
PTCH1-209ENST00000437951 SH2D4BQ5SQS7 431 aa13.36□□□□□ -0.27
PTCH1-209ENST00000437951 CACNA2D4Q7Z3S7 1137 aa13.35□□□□□ -0.27
PTCH1-209ENST00000437951 FERMT1Q9BQL6 677 aa13.35□□□□□ -0.27
PTCH1-209ENST00000437951 KIF4AO95239 1232 aa13.35□□□□□ -0.27
PTCH1-209ENST00000437951 PLVAPQ9BX97 442 aa13.35□□□□□ -0.27
PTCH1-209ENST00000437951 CCDC88BA6NC98 1476 aa13.35□□□□□ -0.27
PTCH1-209ENST00000437951 ANAPC4Q9UJX5 808 aa13.35□□□□□ -0.27
PTCH1-209ENST00000437951 MAATS1Q7Z4T9 603 aa13.35□□□□□ -0.27
PTCH1-209ENST00000437951 ZNF428Q96B54 188 aa13.35□□□□□ -0.27
PTCH1-209ENST00000437951 RNF168Q8IYW5 571 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-209ENST00000437951 HOMER2Q9NSB8 354 aa13.35□□□□□ -0.27
PTCH1-209ENST00000437951 PIP4K2BP78356 416 aa13.34□□□□□ -0.27
PTCH1-209ENST00000437951 B4GALNT4Q76KP1 1039 aa13.34□□□□□ -0.27
PTCH1-209ENST00000437951 C16orf45Q96MC5 204 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-209ENST00000437951 STIM2Q9P246 746 aa13.34□□□□□ -0.27
PTCH1-209ENST00000437951 OTUD6BQ8N6M0 293 aa13.34□□□□□ -0.27
PTCH1-209ENST00000437951 CCDC160A6NGH7 325 aa13.34□□□□□ -0.27
PTCH1-209ENST00000437951 HLTFQ14527 1009 aaKnown RBP eCLIP13.34□□□□□ -0.27
PTCH1-209ENST00000437951 CCDC110Q8TBZ0 833 aa13.34□□□□□ -0.27
PTCH1-209ENST00000437951 SMC6Q96SB8 1091 aa13.34□□□□□ -0.27
PTCH1-209ENST00000437951 NUP88Q99567 741 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-209ENST00000437951 SOGA1O94964 1423 aa13.34□□□□□ -0.27
PTCH1-209ENST00000437951 XPCQ01831 940 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-209ENST00000437951 PSME1Q06323 249 aa13.34□□□□□ -0.27
PTCH1-209ENST00000437951 RASAL2Q9UJF2 1139 aa13.34□□□□□ -0.27
PTCH1-209ENST00000437951 IKBKGQ9Y6K9 419 aa13.34□□□□□ -0.27
PTCH1-209ENST00000437951 KANK4Q5T7N3 995 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-209ENST00000437951 RBM25P49756 843 aaKnown RBP13.33□□□□□ -0.27
PTCH1-209ENST00000437951 LUC7L2Q9Y383 392 aaKnown RBP13.33□□□□□ -0.27
PTCH1-209ENST00000437951 SURF6O75683 361 aaKnown RBP13.33□□□□□ -0.28
PTCH1-209ENST00000437951 CHD1LQ86WJ1 897 aa13.33□□□□□ -0.28
PTCH1-209ENST00000437951 CTCFLQ8NI51 663 aaPredicted RBP13.33□□□□□ -0.28
PTCH1-209ENST00000437951 TCHPQ9BT92 498 aa13.33□□□□□ -0.28
PTCH1-209ENST00000437951 MICALL1Q8N3F8 863 aa13.33□□□□□ -0.28
PTCH1-209ENST00000437951 PDS5BQ9NTI5 1447 aa13.33□□□□□ -0.28
PTCH1-209ENST00000437951 KANK3Q6NY19 840 aa13.33□□□□□ -0.28
PTCH1-209ENST00000437951 NBPF11Q86T75 865 aa13.33□□□□□ -0.28
PTCH1-209ENST00000437951 POTEDQ86YR6 584 aa13.33□□□□□ -0.28
PTCH1-209ENST00000437951 ATP2B1P20020 1258 aa13.33□□□□□ -0.28
PTCH1-209ENST00000437951 OGFRQ9NZT2 677 aa13.33□□□□□ -0.28
PTCH1-209ENST00000437951 IBSPP21815 317 aaPredicted RBP13.32□□□□□ -0.28
PTCH1-209ENST00000437951 RSPH14Q9UHP6 348 aa13.32□□□□□ -0.28
PTCH1-209ENST00000437951 PRPHP41219 470 aa13.32□□□□□ -0.28
PTCH1-209ENST00000437951 LMNTD2Q8IXW0 634 aa13.32□□□□□ -0.28
PTCH1-209ENST00000437951 TTC39AQ5SRH9 613 aa13.32□□□□□ -0.28
PTCH1-209ENST00000437951 ARFGAP2Q8N6H7 521 aa13.32□□□□□ -0.28
PTCH1-209ENST00000437951 CCDC97Q96F63 343 aaPredicted RBP13.32□□□□□ -0.28
PTCH1-209ENST00000437951 CCDC172P0C7W6 258 aa13.32□□□□□ -0.28
PTCH1-209ENST00000437951 IFT74Q96LB3 600 aa13.32□□□□□ -0.28
PTCH1-209ENST00000437951 LACTBP83111 547 aaPredicted RBP13.32□□□□□ -0.28
PTCH1-209ENST00000437951 RAB34Q9BZG1 259 aa13.31□□□□□ -0.28
PTCH1-209ENST00000437951 TRERF1Q96PN7 1200 aa13.31□□□□□ -0.28
PTCH1-209ENST00000437951 ATF3P18847 181 aa13.31□□□□□ -0.28
PTCH1-209ENST00000437951 CCDC129Q6ZRS4 1044 aa13.31□□□□□ -0.28
PTCH1-209ENST00000437951 TTC12Q9H892 705 aaPredicted RBP13.31□□□□□ -0.28
PTCH1-209ENST00000437951 HYPKQ9NX55 129 aa13.31□□□□□ -0.28
PTCH1-209ENST00000437951 A0A1W2PRG0 241 aa13.31□□□□□ -0.28
PTCH1-209ENST00000437951 WDR63Q8IWG1 891 aa13.31□□□□□ -0.28
PTCH1-209ENST00000437951 MKRN1Q9UHC7 482 aaKnown RBP13.31□□□□□ -0.28
PTCH1-209ENST00000437951 ATP11AP98196 1134 aa13.3□□□□□ -0.28
PTCH1-209ENST00000437951 CCDC77Q9BR77 488 aa13.3□□□□□ -0.28
PTCH1-209ENST00000437951 NUTM2FA1L443 756 aa13.3□□□□□ -0.28
PTCH1-209ENST00000437951 ADCY5O95622 1261 aa13.3□□□□□ -0.28
PTCH1-209ENST00000437951 CETN1Q12798 172 aa13.3□□□□□ -0.28
PTCH1-209ENST00000437951 PPFIBP2Q8ND30 876 aa13.3□□□□□ -0.28
PTCH1-209ENST00000437951 CTAGE1Q96RT6 745 aa13.3□□□□□ -0.28
PTCH1-209ENST00000437951 SUDS3Q9H7L9 328 aaPredicted RBP13.3□□□□□ -0.28
PTCH1-209ENST00000437951 MPHOSPH10O00566 681 aaKnown RBP13.3□□□□□ -0.28
PTCH1-209ENST00000437951 MAP4K4O95819 1239 aaPredicted RBP13.3□□□□□ -0.28
PTCH1-209ENST00000437951 CACNA2D3Q8IZS8 1091 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms