RNA–Protein interactions for RNA: ENST00000427505.5

ZNF440-203, Transcript of zinc finger protein 440, humanhuman

TSL 3

Gene ZNF440, Length 920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-203ENST00000427505 EML3Q32P44 896 aa8.12□□□□□ -1.11
ZNF440-203ENST00000427505 ESCO1Q5FWF5 840 aa8.12□□□□□ -1.11
ZNF440-203ENST00000427505 LYSMD3Q7Z3D4 306 aa8.12□□□□□ -1.11
ZNF440-203ENST00000427505 XAGE2Q96GT9 111 aa8.12□□□□□ -1.11
ZNF440-203ENST00000427505 GRIP2Q9C0E4 1043 aa8.12□□□□□ -1.11
ZNF440-203ENST00000427505 TOP2BQ02880 1626 aa8.11□□□□□ -1.11
ZNF440-203ENST00000427505 SPATA31C2B4DYI2 1134 aa8.11□□□□□ -1.11
ZNF440-203ENST00000427505 ATP9BO43861 1147 aa8.11□□□□□ -1.11
ZNF440-203ENST00000427505 PPFIA3O75145 1194 aa8.11□□□□□ -1.11
ZNF440-203ENST00000427505 NCOA4Q13772 614 aa8.11□□□□□ -1.11
ZNF440-203ENST00000427505 SLC16A10Q8TF71 515 aa8.11□□□□□ -1.11
ZNF440-203ENST00000427505 CNKSR1Q969H4 720 aa8.11□□□□□ -1.11
ZNF440-203ENST00000427505 NLRP3Q96P20 1036 aa8.11□□□□□ -1.11
ZNF440-203ENST00000427505 FHDC1Q9C0D6 1143 aaPredicted RBP8.11□□□□□ -1.11
ZNF440-203ENST00000427505 ETNK1Q9HBU6 452 aa8.11□□□□□ -1.11
ZNF440-203ENST00000427505 RAB6BQ9NRW1 208 aa8.11□□□□□ -1.11
ZNF440-203ENST00000427505 BIVM-ERCC5R4GMW8 1640 aa8.11□□□□□ -1.11
ZNF440-203ENST00000427505 TBC1D9Q6ZT07 1266 aa8.1□□□□□ -1.11
ZNF440-203ENST00000427505 PCDHGA11Q9Y5H2 935 aa8.1□□□□□ -1.11
ZNF440-203ENST00000427505 GTF3C3Q9Y5Q9 886 aa8.1□□□□□ -1.11
ZNF440-203ENST00000427505 USP17L3A6NCW0 530 aa8.09□□□□□ -1.11
ZNF440-203ENST00000427505 USP17L4A6NCW7 530 aa8.09□□□□□ -1.11
ZNF440-203ENST00000427505 WDR44Q5JSH3 913 aa8.09□□□□□ -1.11
ZNF440-203ENST00000427505 USP17L2Q6R6M4 530 aa8.09□□□□□ -1.11
ZNF440-203ENST00000427505 USP17L1Q7RTZ2 530 aa8.09□□□□□ -1.11
ZNF440-203ENST00000427505 IRF7Q92985 503 aa8.09□□□□□ -1.11
ZNF440-203ENST00000427505 NOD1Q9Y239 953 aa8.09□□□□□ -1.11
ZNF440-203ENST00000427505 INHAP05111 366 aa8.08□□□□□ -1.12
ZNF440-203ENST00000427505 GDF10P55107 478 aa8.08□□□□□ -1.12
ZNF440-203ENST00000427505 CENPCQ03188 943 aa8.08□□□□□ -1.12
ZNF440-203ENST00000427505 CCDC155Q8N6L0 562 aa8.08□□□□□ -1.12
ZNF440-203ENST00000427505 NANOS1Q8WY41 292 aaKnown RBP8.08□□□□□ -1.12
ZNF440-203ENST00000427505 CFTRP13569 1480 aa8.07□□□□□ -1.12
ZNF440-203ENST00000427505 TMEM229AB2RXF0 380 aa8.07□□□□□ -1.12
ZNF440-203ENST00000427505 GTF2IP78347 998 aa8.07□□□□□ -1.12
ZNF440-203ENST00000427505 CALR3Q96L12 384 aaKnown RBP8.07□□□□□ -1.12
ZNF440-203ENST00000427505 MAFBQ9Y5Q3 323 aaPredicted RBP8.07□□□□□ -1.12
ZNF440-203ENST00000427505 STAU1O95793 577 aaKnown RBP8.06□□□□□ -1.12
ZNF440-203ENST00000427505 ITGA6P23229 1130 aa8.06□□□□□ -1.12
ZNF440-203ENST00000427505 SLC27A3Q5K4L6 730 aa8.06□□□□□ -1.12
ZNF440-203ENST00000427505 NBPF10Q6P3W6 841 aaKnown RBP8.06□□□□□ -1.12
ZNF440-203ENST00000427505 PRICKLE2Q7Z3G6 844 aa8.06□□□□□ -1.12
ZNF440-203ENST00000427505 TRIM50Q86XT4 487 aa8.06□□□□□ -1.12
ZNF440-203ENST00000427505 DEPDC4Q8N2C3 294 aa8.06□□□□□ -1.12
ZNF440-203ENST00000427505 NBPF15Q8N660 670 aa8.06□□□□□ -1.12
ZNF440-203ENST00000427505 SLC4A9Q96Q91 983 aa8.06□□□□□ -1.12
ZNF440-203ENST00000427505 ERICH3Q5RHP9 1530 aa8.06□□□□□ -1.12
ZNF440-203ENST00000427505 RUSC2Q8N2Y8 1516 aa8.06□□□□□ -1.12
ZNF440-203ENST00000427505 MTFR1Q15390 333 aa8.05□□□□□ -1.12
ZNF440-203ENST00000427505 ZSCAN1Q8NBB4 408 aa8.05□□□□□ -1.12
ZNF440-203ENST00000427505 ZSCAN10Q96SZ4 725 aaPredicted RBP8.05□□□□□ -1.12
ZNF440-203ENST00000427505 PPP1R12CQ9BZL4 782 aa8.05□□□□□ -1.12
ZNF440-203ENST00000427505 DYRK1BQ9Y463 629 aa8.05□□□□□ -1.12
ZNF440-203ENST00000427505 PALM3A6NDB9 673 aaPredicted RBP8.04□□□□□ -1.12
ZNF440-203ENST00000427505 RHOQP17081 205 aa8.04□□□□□ -1.12
ZNF440-203ENST00000427505 TLR1Q15399 786 aa8.04□□□□□ -1.12
ZNF440-203ENST00000427505 TAS1R3Q7RTX0 852 aa8.04□□□□□ -1.12
ZNF440-203ENST00000427505 PPARGC1BQ86YN6 1023 aaKnown RBP8.04□□□□□ -1.12
ZNF440-203ENST00000427505 ZNF295-AS1Q8N0V1 137 aa8.04□□□□□ -1.12
ZNF440-203ENST00000427505 ZMYND15Q9H091 742 aa8.04□□□□□ -1.12
ZNF440-203ENST00000427505 ATP1A2P50993 1020 aa8.03□□□□□ -1.12
ZNF440-203ENST00000427505 CLDN10P78369 228 aa8.03□□□□□ -1.12
ZNF440-203ENST00000427505 POU4F2Q12837 409 aa8.03□□□□□ -1.12
ZNF440-203ENST00000427505 SIX5Q8N196 739 aa8.03□□□□□ -1.12
ZNF440-203ENST00000427505 TFIP11Q9UBB9 837 aaKnown RBP8.03□□□□□ -1.12
ZNF440-203ENST00000427505 PRXQ9BXM0 1461 aa8.02□□□□□ -1.13
ZNF440-203ENST00000427505 SMTNP53814 917 aa8.02□□□□□ -1.13
ZNF440-203ENST00000427505 RHBDD1Q8TEB9 315 aa8.02□□□□□ -1.13
ZNF440-203ENST00000427505 GMCL1Q96IK5 515 aa8.02□□□□□ -1.13
ZNF440-203ENST00000427505 IQSEC3Q9UPP2 1182 aaPredicted RBP8.02□□□□□ -1.13
ZNF440-203ENST00000427505 KIAA1024Q9UPX6 916 aa8.02□□□□□ -1.13
ZNF440-203ENST00000427505 ZBTB7BO15156 539 aaPredicted RBP8.01□□□□□ -1.13
ZNF440-203ENST00000427505 EPHA4P54764 986 aa8.01□□□□□ -1.13
ZNF440-203ENST00000427505 GNASQ5JWF2 1037 aa8.01□□□□□ -1.13
ZNF440-203ENST00000427505 LARGE2Q8N3Y3 721 aa8.01□□□□□ -1.13
ZNF440-203ENST00000427505 ZNF358Q9NW07 568 aa8.01□□□□□ -1.13
ZNF440-203ENST00000427505 MKRN1Q9UHC7 482 aaKnown RBP8.01□□□□□ -1.13
ZNF440-203ENST00000427505 VPS8Q8N3P4 1428 aa8.01□□□□□ -1.13
ZNF440-203ENST00000427505 A0A1B0GTH6 734 aa8□□□□□ -1.13
ZNF440-203ENST00000427505 A6NJY4 79 aa8□□□□□ -1.13
ZNF440-203ENST00000427505 M0R2N6 131 aa8□□□□□ -1.13
ZNF440-203ENST00000427505 BACH1O14867 736 aa8□□□□□ -1.13
ZNF440-203ENST00000427505 DKK1O94907 266 aa8□□□□□ -1.13
ZNF440-203ENST00000427505 C4orf17Q53FE4 359 aa8□□□□□ -1.13
ZNF440-203ENST00000427505 CFAP70Q5T0N1 1121 aa8□□□□□ -1.13
ZNF440-203ENST00000427505 TMEM214Q6NUQ4 689 aaKnown RBP8□□□□□ -1.13
ZNF440-203ENST00000427505 TRIM22Q8IYM9 498 aa8□□□□□ -1.13
ZNF440-203ENST00000427505 OGFOD1Q8N543 542 aa8□□□□□ -1.13
ZNF440-203ENST00000427505 DNAAF2Q9NVR5 837 aaKnown RBP8□□□□□ -1.13
ZNF440-203ENST00000427505 CUEDC1Q9NWM3 386 aaPredicted RBP8□□□□□ -1.13
ZNF440-203ENST00000427505 ZNF777Q9ULD5 760 aaPredicted RBP8□□□□□ -1.13
ZNF440-203ENST00000427505 CLIP1P30622 1438 aa8□□□□□ -1.13
ZNF440-203ENST00000427505 PRDM2Q13029 1718 aa8□□□□□ -1.13
ZNF440-203ENST00000427505 CUX1P39880 1505 aa7.99□□□□□ -1.13
ZNF440-203ENST00000427505 CDK2AP1O14519 115 aa7.99□□□□□ -1.13
ZNF440-203ENST00000427505 GTF2E1P29083 439 aaPredicted RBP7.99□□□□□ -1.13
ZNF440-203ENST00000427505 FOXK2Q01167 660 aa7.99□□□□□ -1.13
ZNF440-203ENST00000427505 PSME1Q06323 249 aa7.99□□□□□ -1.13
ZNF440-203ENST00000427505 ZNF837Q96EG3 531 aaPredicted RBP7.99□□□□□ -1.13
ZNF440-203ENST00000427505 TIMMDC1Q9NPL8 285 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms