RNA–Protein interactions for RNA: ENST00000427505.5

ZNF440-203, Transcript of zinc finger protein 440, humanhuman

TSL 3

Gene ZNF440, Length 920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-203ENST00000427505 AEBP2Q6ZN18 517 aaPredicted RBP23.56■■□□□ 1.36
ZNF440-203ENST00000427505 CHIC1Q5VXU3 224 aa22.41■■□□□ 1.18
ZNF440-203ENST00000427505 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
ZNF440-203ENST00000427505 PHF23Q9BUL5 403 aaPredicted RBP19.75■□□□□ 0.75
ZNF440-203ENST00000427505 FOXD1Q16676 465 aa18.7■□□□□ 0.58
ZNF440-203ENST00000427505 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
ZNF440-203ENST00000427505 PPP6R1Q9UPN7 881 aa17.5■□□□□ 0.39
ZNF440-203ENST00000427505 PIAS4Q8N2W9 510 aaPredicted RBP17.44■□□□□ 0.38
ZNF440-203ENST00000427505 ADRA2BP18089 450 aa17.43■□□□□ 0.38
ZNF440-203ENST00000427505 MSH5O43196 834 aa17.42■□□□□ 0.38
ZNF440-203ENST00000427505 POTEDQ86YR6 584 aa17.09■□□□□ 0.33
ZNF440-203ENST00000427505 MAPK8IP2Q13387 824 aaPredicted RBP16.02■□□□□ 0.16
ZNF440-203ENST00000427505 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
ZNF440-203ENST00000427505 DMRT2Q9Y5R5 561 aa15.88■□□□□ 0.13
ZNF440-203ENST00000427505 SCAF1Q9H7N4 1312 aaKnown RBP15.87■□□□□ 0.13
ZNF440-203ENST00000427505 CNKSR2Q8WXI2 1034 aa15.53■□□□□ 0.08
ZNF440-203ENST00000427505 NCBP3Q53F19 620 aaKnown RBP15.46■□□□□ 0.07
ZNF440-203ENST00000427505 KCNA4P22459 653 aa15.37■□□□□ 0.05
ZNF440-203ENST00000427505 HOXD11P31277 338 aaPredicted RBP15.29■□□□□ 0.04
ZNF440-203ENST00000427505 RNF216Q9NWF9 866 aaPredicted RBP15.29■□□□□ 0.04
ZNF440-203ENST00000427505 NPM3O75607 178 aaKnown RBP15.25■□□□□ 0.03
ZNF440-203ENST00000427505 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
ZNF440-203ENST00000427505 DNAJC5BQ9UF47 199 aa15□□□□□ -0.01
ZNF440-203ENST00000427505 CACNB1Q02641 598 aaPredicted RBP14.95□□□□□ -0.02
ZNF440-203ENST00000427505 RNF39Q9H2S5 420 aa14.92□□□□□ -0.02
ZNF440-203ENST00000427505 C1QBPQ07021 282 aaKnown RBP14.64□□□□□ -0.07
ZNF440-203ENST00000427505 SLC4A1APQ9BWU0 796 aaKnown RBP14.6□□□□□ -0.07
ZNF440-203ENST00000427505 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.53□□□□□ -0.08
ZNF440-203ENST00000427505 SLC4A2P04920 1241 aa14.44□□□□□ -0.1
ZNF440-203ENST00000427505 U3KPZ7 1027 aaPredicted RBP14.3□□□□□ -0.12
ZNF440-203ENST00000427505 FOXD4L1Q9NU39 408 aa14.23□□□□□ -0.13
ZNF440-203ENST00000427505 ZBTB22O15209 634 aa14.18□□□□□ -0.14
ZNF440-203ENST00000427505 MYCNP04198 464 aaPredicted RBP14.12□□□□□ -0.15
ZNF440-203ENST00000427505 SPINK5Q9NQ38 1064 aaPredicted RBP14.1□□□□□ -0.15
ZNF440-203ENST00000427505 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.05□□□□□ -0.16
ZNF440-203ENST00000427505 HNRNPUL2Q1KMD3 747 aaKnown RBP14.05□□□□□ -0.16
ZNF440-203ENST00000427505 CAPN15O75808 1086 aa14.01□□□□□ -0.17
ZNF440-203ENST00000427505 SAMD1Q6SPF0 538 aaPredicted RBP13.99□□□□□ -0.17
ZNF440-203ENST00000427505 DSG3P32926 999 aa13.97□□□□□ -0.17
ZNF440-203ENST00000427505 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
ZNF440-203ENST00000427505 EHMT2Q96KQ7 1210 aa13.95□□□□□ -0.18
ZNF440-203ENST00000427505 APLP2Q06481 763 aa13.94□□□□□ -0.18
ZNF440-203ENST00000427505 ATXN8OSP0DMR3 200 aa13.79□□□□□ -0.2
ZNF440-203ENST00000427505 TRHP20396 242 aaPredicted RBP13.79□□□□□ -0.2
ZNF440-203ENST00000427505 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
ZNF440-203ENST00000427505 ABCB7O75027 752 aa13.74□□□□□ -0.21
ZNF440-203ENST00000427505 ATF5Q9Y2D1 282 aaPredicted RBP13.7□□□□□ -0.22
ZNF440-203ENST00000427505 POLA2Q14181 598 aa13.44□□□□□ -0.26
ZNF440-203ENST00000427505 POTEHQ6S545 545 aa13.37□□□□□ -0.27
ZNF440-203ENST00000427505 ZBTB12Q9Y330 459 aaPredicted RBP13.3□□□□□ -0.28
ZNF440-203ENST00000427505 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
ZNF440-203ENST00000427505 FBLN2P98095 1184 aa13.13□□□□□ -0.31
ZNF440-203ENST00000427505 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
ZNF440-203ENST00000427505 OSCARQ8IYS5 282 aa13.04□□□□□ -0.32
ZNF440-203ENST00000427505 CHRDL2Q6WN34 429 aa13.02□□□□□ -0.33
ZNF440-203ENST00000427505 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
ZNF440-203ENST00000427505 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
ZNF440-203ENST00000427505 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
ZNF440-203ENST00000427505 SPDYE2Q495Y8 402 aa12.93□□□□□ -0.34
ZNF440-203ENST00000427505 REM2Q8IYK8 340 aaPredicted RBP12.88□□□□□ -0.35
ZNF440-203ENST00000427505 SSUH2Q9Y2M2 353 aa12.84□□□□□ -0.35
ZNF440-203ENST00000427505 PITPNM1O00562 1244 aa12.78□□□□□ -0.36
ZNF440-203ENST00000427505 ZNF692Q9BU19 519 aaPredicted RBP12.77□□□□□ -0.37
ZNF440-203ENST00000427505 PIP4P2Q8N4L2 257 aa12.74□□□□□ -0.37
ZNF440-203ENST00000427505 SPDYE4A6NLX3 237 aa12.73□□□□□ -0.37
ZNF440-203ENST00000427505 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.39
ZNF440-203ENST00000427505 PROM2Q8N271 834 aa12.63□□□□□ -0.39
ZNF440-203ENST00000427505 PABPN1Q86U42 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
ZNF440-203ENST00000427505 FKBP8Q14318 412 aa12.58□□□□□ -0.4
ZNF440-203ENST00000427505 SPDYE1Q8NFV5 336 aaPredicted RBP12.55□□□□□ -0.4
ZNF440-203ENST00000427505 SP7Q8TDD2 431 aaPredicted RBP12.52□□□□□ -0.41
ZNF440-203ENST00000427505 CLEC11AQ9Y240 323 aa12.48□□□□□ -0.41
ZNF440-203ENST00000427505 HAX1O00165 279 aa12.44□□□□□ -0.42
ZNF440-203ENST00000427505 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
ZNF440-203ENST00000427505 PRKAR2AP13861 404 aaKnown RBP12.41□□□□□ -0.42
ZNF440-203ENST00000427505 EVX2Q03828 476 aa12.39□□□□□ -0.43
ZNF440-203ENST00000427505 PRR29P0C7W0 189 aa12.31□□□□□ -0.44
ZNF440-203ENST00000427505 CHADLQ6NUI6 762 aa12.3□□□□□ -0.44
ZNF440-203ENST00000427505 C19orf67A6NJJ6 358 aa12.25□□□□□ -0.45
ZNF440-203ENST00000427505 FBXO3Q9UK99 471 aa12.21□□□□□ -0.45
ZNF440-203ENST00000427505 CREBZFQ9NS37 354 aa12.18□□□□□ -0.46
ZNF440-203ENST00000427505 FARP1Q9Y4F1 1045 aaPredicted RBP12.09□□□□□ -0.47
ZNF440-203ENST00000427505 MNX1P50219 401 aaPredicted RBP12.08□□□□□ -0.48
ZNF440-203ENST00000427505 VASPP50552 380 aaPredicted RBP12.06□□□□□ -0.48
ZNF440-203ENST00000427505 GABBR2O75899 941 aa12.05□□□□□ -0.48
ZNF440-203ENST00000427505 CD44P16070 742 aaKnown RBP12.02□□□□□ -0.49
ZNF440-203ENST00000427505 MIER1Q8N108 512 aa12.02□□□□□ -0.49
ZNF440-203ENST00000427505 PLEKHG5O94827 1062 aa12.01□□□□□ -0.49
ZNF440-203ENST00000427505 PLCD3Q8N3E9 789 aa12□□□□□ -0.49
ZNF440-203ENST00000427505 ZBTB47Q9UFB7 747 aaPredicted RBP11.96□□□□□ -0.49
ZNF440-203ENST00000427505 NPM1P06748 294 aaKnown RBP eCLIP11.95□□□□□ -0.5
ZNF440-203ENST00000427505 IFNLR1Q8IU57 520 aaPredicted RBP11.87□□□□□ -0.51
ZNF440-203ENST00000427505 POTEIP0CG38 1075 aa11.85□□□□□ -0.51
ZNF440-203ENST00000427505 ZNF579Q8NAF0 562 aaKnown RBP11.84□□□□□ -0.51
ZNF440-203ENST00000427505 NUBP1P53384 320 aa11.83□□□□□ -0.52
ZNF440-203ENST00000427505 ZRANB1Q9UGI0 708 aa11.83□□□□□ -0.52
ZNF440-203ENST00000427505 RASEFQ8IZ41 740 aa11.79□□□□□ -0.52
ZNF440-203ENST00000427505 KLHL34Q8N239 644 aa11.78□□□□□ -0.52
ZNF440-203ENST00000427505 PAK3O75914 559 aaPredicted RBP11.77□□□□□ -0.53
ZNF440-203ENST00000427505 SPOCK2Q92563 424 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms