RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 IFNL2Q8IZJ0 200 aa13.83□□□□□ -0.2
GACAT3-201ENST00000426539 LINC00116Q8NCU8 138 aa13.83□□□□□ -0.2
GACAT3-201ENST00000426539 CCER1Q8TC90 406 aaPredicted RBP13.83□□□□□ -0.2
GACAT3-201ENST00000426539 UTRNP46939 3433 aa13.82□□□□□ -0.2
GACAT3-201ENST00000426539 C4BP0C0L5 1744 aa13.82□□□□□ -0.2
GACAT3-201ENST00000426539 YBX3P16989 372 aaKnown RBP eCLIP13.82□□□□□ -0.2
GACAT3-201ENST00000426539 ITPK1Q13572 414 aa13.82□□□□□ -0.2
GACAT3-201ENST00000426539 FLAD1Q8NFF5 587 aa13.82□□□□□ -0.2
GACAT3-201ENST00000426539 ATG3Q9NT62 314 aa13.82□□□□□ -0.2
GACAT3-201ENST00000426539 TMOD3Q9NYL9 352 aa13.82□□□□□ -0.2
GACAT3-201ENST00000426539 TAF1LQ8IZX4 1826 aa13.82□□□□□ -0.2
GACAT3-201ENST00000426539 PELP1Q8IZL8 1130 aaKnown RBP13.81□□□□□ -0.2
GACAT3-201ENST00000426539 AK7Q96M32 723 aa13.81□□□□□ -0.2
GACAT3-201ENST00000426539 PLEKHG2Q9H7P9 1386 aa13.81□□□□□ -0.2
GACAT3-201ENST00000426539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.8□□□□□ -0.2
GACAT3-201ENST00000426539 PHF14O94880 888 aa13.8□□□□□ -0.2
GACAT3-201ENST00000426539 HMGB2P26583 209 aaKnown RBP13.8□□□□□ -0.2
GACAT3-201ENST00000426539 MORC1Q86VD1 984 aa13.79□□□□□ -0.2
GACAT3-201ENST00000426539 AEBP1Q8IUX7 1158 aa13.79□□□□□ -0.2
GACAT3-201ENST00000426539 SLC4A9Q96Q91 983 aa13.79□□□□□ -0.2
GACAT3-201ENST00000426539 SSFA2P28290 1259 aa13.78□□□□□ -0.2
GACAT3-201ENST00000426539 ATP6V1AP38606 617 aa13.78□□□□□ -0.2
GACAT3-201ENST00000426539 CD2APQ9Y5K6 639 aa13.78□□□□□ -0.2
GACAT3-201ENST00000426539 KDRP35968 1356 aa13.78□□□□□ -0.2
GACAT3-201ENST00000426539 KDM6AO15550 1401 aaPredicted RBP13.78□□□□□ -0.2
GACAT3-201ENST00000426539 ERVV-2B6SEH9 535 aa13.77□□□□□ -0.21
GACAT3-201ENST00000426539 CHD4Q14839 1912 aa13.77□□□□□ -0.21
GACAT3-201ENST00000426539 AMER1Q5JTC6 1135 aaPredicted RBP13.77□□□□□ -0.21
GACAT3-201ENST00000426539 UBR3Q6ZT12 1888 aa13.77□□□□□ -0.21
GACAT3-201ENST00000426539 GNPATO15228 680 aa13.76□□□□□ -0.21
GACAT3-201ENST00000426539 IL13P35225 146 aa13.76□□□□□ -0.21
GACAT3-201ENST00000426539 PLEKHO1Q53GL0 409 aaPredicted RBP13.76□□□□□ -0.21
GACAT3-201ENST00000426539 ZNF530Q6P9A1 599 aaPredicted RBP13.76□□□□□ -0.21
GACAT3-201ENST00000426539 DCAF5Q96JK2 942 aa13.76□□□□□ -0.21
GACAT3-201ENST00000426539 KIF7Q2M1P5 1343 aa13.75□□□□□ -0.21
GACAT3-201ENST00000426539 AMOTQ4VCS5 1084 aa13.75□□□□□ -0.21
GACAT3-201ENST00000426539 KNSTRNQ9Y448 316 aa13.75□□□□□ -0.21
GACAT3-201ENST00000426539 GRIN3BO60391 1043 aa13.74□□□□□ -0.21
GACAT3-201ENST00000426539 HSP90AB1P08238 724 aaKnown RBP13.74□□□□□ -0.21
GACAT3-201ENST00000426539 SULT6B1Q6IMI4 303 aa13.74□□□□□ -0.21
GACAT3-201ENST00000426539 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
GACAT3-201ENST00000426539 PER1O15534 1290 aaPredicted RBP13.72□□□□□ -0.21
GACAT3-201ENST00000426539 MTHFSP49914 203 aa13.72□□□□□ -0.21
GACAT3-201ENST00000426539 CABP4P57796 275 aa13.72□□□□□ -0.21
GACAT3-201ENST00000426539 C1QTNF8P60827 252 aa13.72□□□□□ -0.21
GACAT3-201ENST00000426539 CNTNAP4Q9C0A0 1308 aa13.71□□□□□ -0.21
GACAT3-201ENST00000426539 RC3H1Q5TC82 1133 aaKnown RBP13.71□□□□□ -0.21
GACAT3-201ENST00000426539 ARHGEF1Q92888 912 aaKnown RBP13.71□□□□□ -0.21
GACAT3-201ENST00000426539 WWC3Q9ULE0 1092 aa13.71□□□□□ -0.21
GACAT3-201ENST00000426539 MMP10P09238 476 aa13.7□□□□□ -0.22
GACAT3-201ENST00000426539 C1orf141Q5JVX7 400 aa13.7□□□□□ -0.22
GACAT3-201ENST00000426539 TRAPPC3LQ5T215 181 aa13.7□□□□□ -0.22
GACAT3-201ENST00000426539 NFATC2IPQ8NCF5 419 aa13.7□□□□□ -0.22
GACAT3-201ENST00000426539 RTCBQ9Y3I0 505 aaKnown RBP13.7□□□□□ -0.22
GACAT3-201ENST00000426539 GOLGB1Q14789 3259 aaKnown RBP13.7□□□□□ -0.22
GACAT3-201ENST00000426539 ZNF831Q5JPB2 1677 aa13.69□□□□□ -0.22
GACAT3-201ENST00000426539 PTCD1O75127 700 aaKnown RBP13.69□□□□□ -0.22
GACAT3-201ENST00000426539 RPS6KA4O75676 772 aa13.69□□□□□ -0.22
GACAT3-201ENST00000426539 GYS1P13807 737 aa13.68□□□□□ -0.22
GACAT3-201ENST00000426539 ADCY9O60503 1353 aa13.68□□□□□ -0.22
GACAT3-201ENST00000426539 COL5A3P25940 1745 aaPredicted RBP13.67□□□□□ -0.22
GACAT3-201ENST00000426539 ATP10DQ9P241 1426 aa13.67□□□□□ -0.22
GACAT3-201ENST00000426539 GIGYF1O75420 1035 aaPredicted RBP13.67□□□□□ -0.22
GACAT3-201ENST00000426539 HMOX1P09601 288 aa13.67□□□□□ -0.22
GACAT3-201ENST00000426539 AKAP4Q5JQC9 854 aa13.67□□□□□ -0.22
GACAT3-201ENST00000426539 LGR6Q9HBX8 967 aa13.67□□□□□ -0.22
GACAT3-201ENST00000426539 PXDNLA1KZ92 1463 aa13.67□□□□□ -0.22
GACAT3-201ENST00000426539 CRKLP46109 303 aaKnown RBP13.66□□□□□ -0.22
GACAT3-201ENST00000426539 CC2D1BQ5T0F9 858 aaKnown RBP13.66□□□□□ -0.22
GACAT3-201ENST00000426539 NLGN1Q8N2Q7 840 aa13.66□□□□□ -0.22
GACAT3-201ENST00000426539 C10orf71Q711Q0 1435 aa13.65□□□□□ -0.22
GACAT3-201ENST00000426539 CICQ96RK0 1608 aaPredicted RBP13.65□□□□□ -0.22
GACAT3-201ENST00000426539 SENP3-EIF4A1A0A087X0R7 540 aa13.65□□□□□ -0.22
GACAT3-201ENST00000426539 INTS5Q6P9B9 1019 aaKnown RBP13.65□□□□□ -0.22
GACAT3-201ENST00000426539 SLC52A2Q9HAB3 445 aa13.65□□□□□ -0.22
GACAT3-201ENST00000426539 MYH14Q7Z406 1995 aaKnown RBP13.65□□□□□ -0.22
GACAT3-201ENST00000426539 RNMTO43148 476 aaKnown RBP13.64□□□□□ -0.23
GACAT3-201ENST00000426539 RFC4P35249 363 aa13.64□□□□□ -0.23
GACAT3-201ENST00000426539 MTHFSDQ2M296 383 aaKnown RBP13.64□□□□□ -0.23
GACAT3-201ENST00000426539 SRP68Q9UHB9 627 aaKnown RBP13.64□□□□□ -0.23
GACAT3-201ENST00000426539 TJP1Q07157 1748 aa13.64□□□□□ -0.23
GACAT3-201ENST00000426539 KIAA1551Q9HCM1 1747 aa13.64□□□□□ -0.23
GACAT3-201ENST00000426539 MRC1P22897 1456 aa13.63□□□□□ -0.23
GACAT3-201ENST00000426539 A0A0G2JLW4 131 aa13.63□□□□□ -0.23
GACAT3-201ENST00000426539 DIAPH1O60610 1272 aaKnown RBP13.63□□□□□ -0.23
GACAT3-201ENST00000426539 TGFB2P61812 414 aa13.63□□□□□ -0.23
GACAT3-201ENST00000426539 SLC39A6Q13433 755 aa13.63□□□□□ -0.23
GACAT3-201ENST00000426539 DNAJC10Q8IXB1 793 aa13.63□□□□□ -0.23
GACAT3-201ENST00000426539 USP42Q9H9J4 1324 aaKnown RBP13.63□□□□□ -0.23
GACAT3-201ENST00000426539 COL3A1P02461 1466 aaPredicted RBP13.62□□□□□ -0.23
GACAT3-201ENST00000426539 NPC1L1Q9UHC9 1359 aa13.62□□□□□ -0.23
GACAT3-201ENST00000426539 DPEP1P16444 411 aa13.62□□□□□ -0.23
GACAT3-201ENST00000426539 DDR1Q08345 913 aa13.62□□□□□ -0.23
GACAT3-201ENST00000426539 FKBP8Q14318 412 aa13.62□□□□□ -0.23
GACAT3-201ENST00000426539 SCN11AQ9UI33 1791 aa13.62□□□□□ -0.23
GACAT3-201ENST00000426539 KIF13BQ9NQT8 1826 aa13.62□□□□□ -0.23
GACAT3-201ENST00000426539 C4AP0C0L4 1744 aa13.61□□□□□ -0.23
GACAT3-201ENST00000426539 KCNA3P22001 575 aa13.61□□□□□ -0.23
GACAT3-201ENST00000426539 DSG3P32926 999 aa13.61□□□□□ -0.23
GACAT3-201ENST00000426539 CCDC87Q9NVE4 849 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms