RNA–Protein interactions for RNA: ENST00000421386.1

SCG2-202, Transcript of secretogranin II, humanhuman

TSL 3

Gene SCG2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-202ENST00000421386 NFKBIBQ15653 356 aa6.75□□□□□ -1.33
SCG2-202ENST00000421386 CYLDQ9NQC7 956 aa6.75□□□□□ -1.33
SCG2-202ENST00000421386 CEP162Q5TB80 1403 aa6.75□□□□□ -1.33
SCG2-202ENST00000421386 ESPNB1AK53 854 aa6.74□□□□□ -1.33
SCG2-202ENST00000421386 GPR25O00155 361 aa6.74□□□□□ -1.33
SCG2-202ENST00000421386 KIF20AO95235 890 aa6.74□□□□□ -1.33
SCG2-202ENST00000421386 ITGB2P05107 769 aa6.74□□□□□ -1.33
SCG2-202ENST00000421386 ARID3AQ99856 593 aa6.74□□□□□ -1.33
SCG2-202ENST00000421386 CHMP4BQ9H444 224 aaKnown RBP6.74□□□□□ -1.33
SCG2-202ENST00000421386 PEG3Q9GZU2 1588 aa6.74□□□□□ -1.33
SCG2-202ENST00000421386 CELA2BP08218 269 aaPredicted RBP6.73□□□□□ -1.33
SCG2-202ENST00000421386 USP17L8P0C7I0 530 aa6.73□□□□□ -1.33
SCG2-202ENST00000421386 DCAF11Q8TEB1 546 aa6.73□□□□□ -1.33
SCG2-202ENST00000421386 ZNF837Q96EG3 531 aaPredicted RBP6.73□□□□□ -1.33
SCG2-202ENST00000421386 GPSM3Q9Y4H4 160 aa6.73□□□□□ -1.33
SCG2-202ENST00000421386 DNMT3AQ9Y6K1 912 aaPredicted RBP6.73□□□□□ -1.33
SCG2-202ENST00000421386 TNNT2P45379 298 aaPredicted RBP6.72□□□□□ -1.33
SCG2-202ENST00000421386 PRICKLE2Q7Z3G6 844 aa6.72□□□□□ -1.33
SCG2-202ENST00000421386 TRIM34Q9BYJ4 488 aa6.72□□□□□ -1.33
SCG2-202ENST00000421386 RB1CC1Q8TDY2 1594 aa6.72□□□□□ -1.33
SCG2-202ENST00000421386 RNF123Q5XPI4 1314 aa6.72□□□□□ -1.33
SCG2-202ENST00000421386 ABCC9O60706 1549 aa6.71□□□□□ -1.33
SCG2-202ENST00000421386 SMARCA2P51531 1590 aa6.71□□□□□ -1.34
SCG2-202ENST00000421386 GOLGA6L3A6NEY3 463 aa6.71□□□□□ -1.34
SCG2-202ENST00000421386 MARSP56192 900 aaKnown RBP6.71□□□□□ -1.34
SCG2-202ENST00000421386 SRSF11Q05519 484 aaKnown RBP6.71□□□□□ -1.34
SCG2-202ENST00000421386 SLC20A2Q08357 652 aa6.71□□□□□ -1.34
SCG2-202ENST00000421386 DMTNQ08495 405 aa6.71□□□□□ -1.34
SCG2-202ENST00000421386 NBPF20Q3BBV1 942 aa6.71□□□□□ -1.34
SCG2-202ENST00000421386 LYSMD3Q7Z3D4 306 aa6.71□□□□□ -1.34
SCG2-202ENST00000421386 TRIM52Q96A61 297 aa6.71□□□□□ -1.34
SCG2-202ENST00000421386 ISY1Q9ULR0 285 aaKnown RBP6.71□□□□□ -1.34
SCG2-202ENST00000421386 LAS1LQ9Y4W2 734 aaKnown RBP6.71□□□□□ -1.34
SCG2-202ENST00000421386 DBN1Q16643 649 aa6.7□□□□□ -1.34
SCG2-202ENST00000421386 DZIP3Q86Y13 1208 aaKnown RBP6.7□□□□□ -1.34
SCG2-202ENST00000421386 GTPBP4Q9BZE4 634 aaKnown RBP6.7□□□□□ -1.34
SCG2-202ENST00000421386 TMEM51Q9NW97 253 aa6.7□□□□□ -1.34
SCG2-202ENST00000421386 CNTNAP5Q8WYK1 1306 aa6.7□□□□□ -1.34
SCG2-202ENST00000421386 RNF144AP50876 292 aaPredicted RBP6.69□□□□□ -1.34
SCG2-202ENST00000421386 B4GALNT3Q6L9W6 998 aa6.69□□□□□ -1.34
SCG2-202ENST00000421386 DHX37Q8IY37 1157 aaKnown RBP6.69□□□□□ -1.34
SCG2-202ENST00000421386 ATP1B4Q9UN42 357 aaPredicted RBP6.69□□□□□ -1.34
SCG2-202ENST00000421386 GIGYF1O75420 1035 aaPredicted RBP6.68□□□□□ -1.34
SCG2-202ENST00000421386 LETM1O95202 739 aaPredicted RBP6.68□□□□□ -1.34
SCG2-202ENST00000421386 RFC5P40937 340 aa6.68□□□□□ -1.34
SCG2-202ENST00000421386 MMP14P50281 582 aa6.68□□□□□ -1.34
SCG2-202ENST00000421386 BACH2Q9BYV9 841 aa6.68□□□□□ -1.34
SCG2-202ENST00000421386 ZBED9Q6R2W3 1325 aa6.68□□□□□ -1.34
SCG2-202ENST00000421386 IGF1RP08069 1367 aa6.68□□□□□ -1.34
SCG2-202ENST00000421386 CLGNO14967 610 aa6.67□□□□□ -1.34
SCG2-202ENST00000421386 THBS1P07996 1170 aa6.67□□□□□ -1.34
SCG2-202ENST00000421386 CDK11BP21127 795 aaKnown RBP6.67□□□□□ -1.34
SCG2-202ENST00000421386 SCTRP47872 440 aa6.67□□□□□ -1.34
SCG2-202ENST00000421386 AXDND1Q5T1B0 1012 aaPredicted RBP6.67□□□□□ -1.34
SCG2-202ENST00000421386 KANK3Q6NY19 840 aa6.67□□□□□ -1.34
SCG2-202ENST00000421386 TRIM22Q8IYM9 498 aa6.67□□□□□ -1.34
SCG2-202ENST00000421386 ACDQ96AP0 544 aa6.67□□□□□ -1.34
SCG2-202ENST00000421386 TRIM44Q96DX7 344 aaPredicted RBP6.67□□□□□ -1.34
SCG2-202ENST00000421386 MEN1O00255 615 aa6.66□□□□□ -1.34
SCG2-202ENST00000421386 PTMSP20962 102 aa6.66□□□□□ -1.34
SCG2-202ENST00000421386 PLA2G4EQ3MJ16 856 aa6.66□□□□□ -1.34
SCG2-202ENST00000421386 RGS22Q8NE09 1264 aa6.66□□□□□ -1.34
SCG2-202ENST00000421386 SECISBP2LQ93073 1101 aaKnown RBP6.66□□□□□ -1.34
SCG2-202ENST00000421386 GTPBP3Q969Y2 492 aaKnown RBP6.66□□□□□ -1.34
SCG2-202ENST00000421386 SCARF2Q96GP6 870 aaPredicted RBP6.66□□□□□ -1.34
SCG2-202ENST00000421386 DCAF5Q96JK2 942 aa6.66□□□□□ -1.34
SCG2-202ENST00000421386 MBIPQ9NS73 344 aa6.66□□□□□ -1.34
SCG2-202ENST00000421386 SMG6Q86US8 1419 aaKnown RBP6.66□□□□□ -1.34
SCG2-202ENST00000421386 A0A1W2PRU2 124 aa6.65□□□□□ -1.34
SCG2-202ENST00000421386 FSD2A1L4K1 749 aa6.65□□□□□ -1.34
SCG2-202ENST00000421386 ATP5J2-PTCD1G3V325 749 aa6.65□□□□□ -1.34
SCG2-202ENST00000421386 FBXO45P0C2W1 286 aa6.65□□□□□ -1.34
SCG2-202ENST00000421386 HNRNPUQ00839 825 aaKnown RBP eCLIP6.65□□□□□ -1.34
SCG2-202ENST00000421386 MAP3K10Q02779 954 aa6.65□□□□□ -1.34
SCG2-202ENST00000421386 POU4F2Q12837 409 aa6.65□□□□□ -1.34
SCG2-202ENST00000421386 RIPOR1Q6ZS17 1223 aa6.65□□□□□ -1.34
SCG2-202ENST00000421386 GJD4Q96KN9 370 aaPredicted RBP6.65□□□□□ -1.34
SCG2-202ENST00000421386 GOPCQ9HD26 462 aa6.65□□□□□ -1.34
SCG2-202ENST00000421386 CEP164Q9UPV0 1460 aa6.65□□□□□ -1.35
SCG2-202ENST00000421386 IGHA1P01876 353 aa6.64□□□□□ -1.35
SCG2-202ENST00000421386 PROCP04070 461 aa6.64□□□□□ -1.35
SCG2-202ENST00000421386 IRX3P78415 501 aaPredicted RBP6.64□□□□□ -1.35
SCG2-202ENST00000421386 C14orf37Q86TY3 774 aa6.64□□□□□ -1.35
SCG2-202ENST00000421386 ZNF622Q969S3 477 aaKnown RBP eCLIP6.64□□□□□ -1.35
SCG2-202ENST00000421386 ZNF830Q96NB3 372 aaPredicted RBP6.64□□□□□ -1.35
SCG2-202ENST00000421386 PCDHB9Q9Y5E1 797 aa6.64□□□□□ -1.35
SCG2-202ENST00000421386 GPR37L1O60883 481 aa6.63□□□□□ -1.35
SCG2-202ENST00000421386 PTMAP06454 111 aaKnown RBP6.63□□□□□ -1.35
SCG2-202ENST00000421386 ERVK-9P63128 1117 aa6.63□□□□□ -1.35
SCG2-202ENST00000421386 IRX6P78412 446 aaPredicted RBP6.63□□□□□ -1.35
SCG2-202ENST00000421386 DDX10Q13206 875 aaKnown RBP6.63□□□□□ -1.35
SCG2-202ENST00000421386 XP32Q5T750 250 aa6.63□□□□□ -1.35
SCG2-202ENST00000421386 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.63□□□□□ -1.35
SCG2-202ENST00000421386 PHLDB1Q86UU1 1377 aa6.63□□□□□ -1.35
SCG2-202ENST00000421386 GAS2L1Q99501 681 aaPredicted RBP6.63□□□□□ -1.35
SCG2-202ENST00000421386 SPOCK3Q9BQ16 436 aa6.63□□□□□ -1.35
SCG2-202ENST00000421386 HMGB1P09429 215 aaKnown RBP6.62□□□□□ -1.35
SCG2-202ENST00000421386 BCRP11274 1271 aa6.62□□□□□ -1.35
SCG2-202ENST00000421386 MRE11P49959 708 aa6.62□□□□□ -1.35
SCG2-202ENST00000421386 NEUROD2Q15784 382 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms