RNA–Protein interactions for RNA: ENST00000416078.1

NCLP2-201, Transcript of nucleolin pseudogene 2, humanhuman

BASIC

Gene NCLP2, Length 1,462 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP2-201ENST00000416078 PDS5BQ9NTI5 1447 aa8.6□□□□□ -1.03
NCLP2-201ENST00000416078 CFTRP13569 1480 aa8.6□□□□□ -1.03
NCLP2-201ENST00000416078 ERCC6Q03468 1493 aa8.6□□□□□ -1.03
NCLP2-201ENST00000416078 FIGNL2A6NMB9 653 aa8.59□□□□□ -1.03
NCLP2-201ENST00000416078 LZTS3O60299 673 aaPredicted RBP8.59□□□□□ -1.03
NCLP2-201ENST00000416078 ARHGEF10LQ9HCE6 1279 aa8.59□□□□□ -1.03
NCLP2-201ENST00000416078 HRH3Q9Y5N1 445 aa8.59□□□□□ -1.03
NCLP2-201ENST00000416078 KRTAP4-8A0A0G2JLE6 195 aa8.58□□□□□ -1.04
NCLP2-201ENST00000416078 SLC35F4A4IF30 521 aa8.58□□□□□ -1.04
NCLP2-201ENST00000416078 PTSQ03393 145 aa8.58□□□□□ -1.04
NCLP2-201ENST00000416078 OXLD1Q5BKU9 147 aa8.58□□□□□ -1.04
NCLP2-201ENST00000416078 UCN2Q96RP3 112 aa8.58□□□□□ -1.04
NCLP2-201ENST00000416078 KRTAP4-12Q9BQ66 201 aa8.58□□□□□ -1.04
NCLP2-201ENST00000416078 PPFIA3O75145 1194 aa8.57□□□□□ -1.04
NCLP2-201ENST00000416078 KRTAP9-9Q9BYP9 154 aa8.57□□□□□ -1.04
NCLP2-201ENST00000416078 KRTAP9-4Q9BYQ2 154 aa8.57□□□□□ -1.04
NCLP2-201ENST00000416078 ESF1Q9H501 851 aaKnown RBP8.57□□□□□ -1.04
NCLP2-201ENST00000416078 PRDM2Q13029 1718 aa8.57□□□□□ -1.04
NCLP2-201ENST00000416078 IL2RAP01589 272 aa8.57□□□□□ -1.04
NCLP2-201ENST00000416078 LYSMD3Q7Z3D4 306 aa8.57□□□□□ -1.04
NCLP2-201ENST00000416078 ESYT1Q9BSJ8 1104 aa8.57□□□□□ -1.04
NCLP2-201ENST00000416078 GRIP2Q9C0E4 1043 aa8.57□□□□□ -1.04
NCLP2-201ENST00000416078 KIF21AQ7Z4S6 1674 aa8.56□□□□□ -1.04
NCLP2-201ENST00000416078 SENP3-EIF4A1A0A087X0R7 540 aa8.56□□□□□ -1.04
NCLP2-201ENST00000416078 MEN1O00255 615 aa8.56□□□□□ -1.04
NCLP2-201ENST00000416078 WASLO00401 505 aaPredicted RBP8.56□□□□□ -1.04
NCLP2-201ENST00000416078 MSTNO14793 375 aa8.56□□□□□ -1.04
NCLP2-201ENST00000416078 IRS1P35568 1242 aa8.56□□□□□ -1.04
NCLP2-201ENST00000416078 HDGFL1Q5TGJ6 251 aa8.56□□□□□ -1.04
NCLP2-201ENST00000416078 PLEKHM2Q8IWE5 1019 aa8.56□□□□□ -1.04
NCLP2-201ENST00000416078 XAGE2Q96GT9 111 aa8.56□□□□□ -1.04
NCLP2-201ENST00000416078 SPATA31C2B4DYI2 1134 aa8.55□□□□□ -1.04
NCLP2-201ENST00000416078 SKIP12755 728 aa8.55□□□□□ -1.04
NCLP2-201ENST00000416078 ESCO1Q5FWF5 840 aa8.55□□□□□ -1.04
NCLP2-201ENST00000416078 GLMNQ92990 594 aa8.55□□□□□ -1.04
NCLP2-201ENST00000416078 NLRP3Q96P20 1036 aa8.55□□□□□ -1.04
NCLP2-201ENST00000416078 FANCD2Q9BXW9 1451 aa8.54□□□□□ -1.04
NCLP2-201ENST00000416078 USP17L5A8MUK1 530 aa8.54□□□□□ -1.04
NCLP2-201ENST00000416078 SCNN1DP51172 638 aa8.54□□□□□ -1.04
NCLP2-201ENST00000416078 EML3Q32P44 896 aa8.54□□□□□ -1.04
NCLP2-201ENST00000416078 CCDC155Q8N6L0 562 aa8.54□□□□□ -1.04
NCLP2-201ENST00000416078 NANOS1Q8WY41 292 aaKnown RBP8.54□□□□□ -1.04
NCLP2-201ENST00000416078 CNKSR1Q969H4 720 aa8.54□□□□□ -1.04
NCLP2-201ENST00000416078 FHDC1Q9C0D6 1143 aaPredicted RBP8.54□□□□□ -1.04
NCLP2-201ENST00000416078 ETNK1Q9HBU6 452 aa8.54□□□□□ -1.04
NCLP2-201ENST00000416078 RAB6BQ9NRW1 208 aa8.54□□□□□ -1.04
NCLP2-201ENST00000416078 WDR44Q5JSH3 913 aa8.53□□□□□ -1.04
NCLP2-201ENST00000416078 CEP164Q9UPV0 1460 aa8.53□□□□□ -1.04
NCLP2-201ENST00000416078 ATP9BO43861 1147 aa8.52□□□□□ -1.05
NCLP2-201ENST00000416078 NCOA4Q13772 614 aa8.52□□□□□ -1.05
NCLP2-201ENST00000416078 PCDHGA11Q9Y5H2 935 aa8.52□□□□□ -1.05
NCLP2-201ENST00000416078 CENPCQ03188 943 aa8.51□□□□□ -1.05
NCLP2-201ENST00000416078 TBC1D9Q6ZT07 1266 aa8.51□□□□□ -1.05
NCLP2-201ENST00000416078 NOD1Q9Y239 953 aa8.51□□□□□ -1.05
NCLP2-201ENST00000416078 THOC2Q8NI27 1593 aaKnown RBP8.51□□□□□ -1.05
NCLP2-201ENST00000416078 INHAP05111 366 aa8.51□□□□□ -1.05
NCLP2-201ENST00000416078 ITGA6P23229 1130 aa8.51□□□□□ -1.05
NCLP2-201ENST00000416078 GDF10P55107 478 aa8.51□□□□□ -1.05
NCLP2-201ENST00000416078 SLC27A3Q5K4L6 730 aa8.51□□□□□ -1.05
NCLP2-201ENST00000416078 PRICKLE2Q7Z3G6 844 aa8.51□□□□□ -1.05
NCLP2-201ENST00000416078 USP17L3A6NCW0 530 aa8.5□□□□□ -1.05
NCLP2-201ENST00000416078 USP17L4A6NCW7 530 aa8.5□□□□□ -1.05
NCLP2-201ENST00000416078 TMEM229AB2RXF0 380 aa8.5□□□□□ -1.05
NCLP2-201ENST00000416078 NBPF10Q6P3W6 841 aaKnown RBP8.5□□□□□ -1.05
NCLP2-201ENST00000416078 USP17L2Q6R6M4 530 aa8.5□□□□□ -1.05
NCLP2-201ENST00000416078 USP17L1Q7RTZ2 530 aa8.5□□□□□ -1.05
NCLP2-201ENST00000416078 NBPF15Q8N660 670 aa8.5□□□□□ -1.05
NCLP2-201ENST00000416078 CUX2O14529 1486 aa8.5□□□□□ -1.05
NCLP2-201ENST00000416078 MRC2Q9UBG0 1479 aa8.5□□□□□ -1.05
NCLP2-201ENST00000416078 STAU1O95793 577 aaKnown RBP8.49□□□□□ -1.05
NCLP2-201ENST00000416078 RHOQP17081 205 aa8.49□□□□□ -1.05
NCLP2-201ENST00000416078 GTF2IP78347 998 aa8.49□□□□□ -1.05
NCLP2-201ENST00000416078 SCARF2Q96GP6 870 aaPredicted RBP8.49□□□□□ -1.05
NCLP2-201ENST00000416078 DYRK1BQ9Y463 629 aa8.49□□□□□ -1.05
NCLP2-201ENST00000416078 TAS1R3Q7RTX0 852 aa8.48□□□□□ -1.05
NCLP2-201ENST00000416078 SLC4A9Q96Q91 983 aa8.48□□□□□ -1.05
NCLP2-201ENST00000416078 ZSCAN10Q96SZ4 725 aaPredicted RBP8.48□□□□□ -1.05
NCLP2-201ENST00000416078 POU4F2Q12837 409 aa8.47□□□□□ -1.05
NCLP2-201ENST00000416078 MTFR1Q15390 333 aa8.47□□□□□ -1.05
NCLP2-201ENST00000416078 TLR1Q15399 786 aa8.47□□□□□ -1.05
NCLP2-201ENST00000416078 TRIM50Q86XT4 487 aa8.47□□□□□ -1.05
NCLP2-201ENST00000416078 PPARGC1BQ86YN6 1023 aaKnown RBP8.47□□□□□ -1.05
NCLP2-201ENST00000416078 DEPDC4Q8N2C3 294 aa8.47□□□□□ -1.05
NCLP2-201ENST00000416078 MAFBQ9Y5Q3 323 aaPredicted RBP8.47□□□□□ -1.05
NCLP2-201ENST00000416078 GTF3C3Q9Y5Q9 886 aa8.47□□□□□ -1.05
NCLP2-201ENST00000416078 WDR62O43379 1518 aa8.46□□□□□ -1.05
NCLP2-201ENST00000416078 K7ELQ4 463 aaPredicted RBP8.46□□□□□ -1.05
NCLP2-201ENST00000416078 ZNF295-AS1Q8N0V1 137 aa8.46□□□□□ -1.05
NCLP2-201ENST00000416078 RHBDD1Q8TEB9 315 aa8.46□□□□□ -1.05
NCLP2-201ENST00000416078 GMCL1Q96IK5 515 aa8.46□□□□□ -1.05
NCLP2-201ENST00000416078 CALR3Q96L12 384 aaKnown RBP8.46□□□□□ -1.05
NCLP2-201ENST00000416078 MARSP56192 900 aaKnown RBP8.45□□□□□ -1.06
NCLP2-201ENST00000416078 URB2Q14146 1524 aaKnown RBP8.45□□□□□ -1.06
NCLP2-201ENST00000416078 PALM3A6NDB9 673 aaPredicted RBP8.45□□□□□ -1.06
NCLP2-201ENST00000416078 ATP1A2P50993 1020 aa8.45□□□□□ -1.06
NCLP2-201ENST00000416078 SMTNP53814 917 aa8.45□□□□□ -1.06
NCLP2-201ENST00000416078 GNASQ5JWF2 1037 aa8.45□□□□□ -1.06
NCLP2-201ENST00000416078 PPP1R12CQ9BZL4 782 aa8.45□□□□□ -1.06
NCLP2-201ENST00000416078 CUEDC1Q9NWM3 386 aaPredicted RBP8.45□□□□□ -1.06
NCLP2-201ENST00000416078 ABCC8Q09428 1581 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms