RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 KLRG1Q96E93 195 aa7.9□□□□□ -1.14
TRAPPC13-203ENST00000415825 ARHGEF10LQ9HCE6 1279 aa7.9□□□□□ -1.14
TRAPPC13-203ENST00000415825 TMEM214Q6NUQ4 689 aaKnown RBP7.89□□□□□ -1.15
TRAPPC13-203ENST00000415825 HMX1Q9NP08 348 aaPredicted RBP7.89□□□□□ -1.15
TRAPPC13-203ENST00000415825 PCDHB11Q9Y5F2 797 aa7.89□□□□□ -1.15
TRAPPC13-203ENST00000415825 TMEM259Q4ZIN3 620 aa7.88□□□□□ -1.15
TRAPPC13-203ENST00000415825 ZSCAN10Q96SZ4 725 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC13-203ENST00000415825 ATXN7L1Q9ULK2 861 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC13-203ENST00000415825 SHISA8B8ZZ34 492 aa7.87□□□□□ -1.15
TRAPPC13-203ENST00000415825 GNRH1P01148 92 aa7.87□□□□□ -1.15
TRAPPC13-203ENST00000415825 PHKA2P46019 1235 aa7.86□□□□□ -1.15
TRAPPC13-203ENST00000415825 CNKSR1Q969H4 720 aa7.86□□□□□ -1.15
TRAPPC13-203ENST00000415825 RFC5P40937 340 aa7.85□□□□□ -1.15
TRAPPC13-203ENST00000415825 ESCO1Q5FWF5 840 aa7.85□□□□□ -1.15
TRAPPC13-203ENST00000415825 SLCO4C1Q6ZQN7 724 aa7.85□□□□□ -1.15
TRAPPC13-203ENST00000415825 ESYT1Q9BSJ8 1104 aa7.85□□□□□ -1.15
TRAPPC13-203ENST00000415825 KDM4CQ9H3R0 1056 aa7.85□□□□□ -1.15
TRAPPC13-203ENST00000415825 FBXO45P0C2W1 286 aa7.84□□□□□ -1.15
TRAPPC13-203ENST00000415825 COL8A1P27658 744 aa7.84□□□□□ -1.15
TRAPPC13-203ENST00000415825 FIGNL1Q6PIW4 674 aa7.84□□□□□ -1.15
TRAPPC13-203ENST00000415825 PSMG3-AS1Q96PY0 264 aa7.84□□□□□ -1.15
TRAPPC13-203ENST00000415825 RAB6BQ9NRW1 208 aa7.84□□□□□ -1.15
TRAPPC13-203ENST00000415825 FGFR3P22607 806 aa7.83□□□□□ -1.16
TRAPPC13-203ENST00000415825 CENPCQ03188 943 aa7.83□□□□□ -1.16
TRAPPC13-203ENST00000415825 PCMTD1Q96MG8 357 aaPredicted RBP7.83□□□□□ -1.16
TRAPPC13-203ENST00000415825 GGA1Q9UJY5 639 aa7.83□□□□□ -1.16
TRAPPC13-203ENST00000415825 SCO2A0A1W2PP80 73 aa7.82□□□□□ -1.16
TRAPPC13-203ENST00000415825 C1QTNF9BB2RNN3 333 aa7.82□□□□□ -1.16
TRAPPC13-203ENST00000415825 APBB1O00213 710 aa7.82□□□□□ -1.16
TRAPPC13-203ENST00000415825 NR1H3Q13133 447 aa7.82□□□□□ -1.16
TRAPPC13-203ENST00000415825 FAM117AQ9C073 453 aa7.82□□□□□ -1.16
TRAPPC13-203ENST00000415825 RUBCNLQ9H714 662 aa7.82□□□□□ -1.16
TRAPPC13-203ENST00000415825 ABHD17AQ96GS6 310 aa7.81□□□□□ -1.16
TRAPPC13-203ENST00000415825 SEMA6BQ9H3T3 888 aa7.81□□□□□ -1.16
TRAPPC13-203ENST00000415825 OSBPL3Q9H4L5 887 aa7.81□□□□□ -1.16
TRAPPC13-203ENST00000415825 SPDYE3A6NKU9 549 aa7.8□□□□□ -1.16
TRAPPC13-203ENST00000415825 TRAK2O60296 914 aa7.8□□□□□ -1.16
TRAPPC13-203ENST00000415825 ARAFP10398 606 aa7.8□□□□□ -1.16
TRAPPC13-203ENST00000415825 SCTRP47872 440 aa7.8□□□□□ -1.16
TRAPPC13-203ENST00000415825 ZMYM1Q5SVZ6 1142 aa7.8□□□□□ -1.16
TRAPPC13-203ENST00000415825 FBXO31Q5XUX0 539 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC13-203ENST00000415825 TBC1D9Q6ZT07 1266 aa7.8□□□□□ -1.16
TRAPPC13-203ENST00000415825 BTBD6Q96KE9 485 aa7.8□□□□□ -1.16
TRAPPC13-203ENST00000415825 MSX1P28360 303 aa7.79□□□□□ -1.16
TRAPPC13-203ENST00000415825 RNF135Q8IUD6 432 aa7.79□□□□□ -1.16
TRAPPC13-203ENST00000415825 TRIM34Q9BYJ4 488 aa7.79□□□□□ -1.16
TRAPPC13-203ENST00000415825 SUV39H2Q9H5I1 410 aa7.79□□□□□ -1.16
TRAPPC13-203ENST00000415825 GPBP1L1Q9HC44 474 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC13-203ENST00000415825 EPXP11678 715 aa7.78□□□□□ -1.16
TRAPPC13-203ENST00000415825 ADH6P28332 368 aa7.78□□□□□ -1.16
TRAPPC13-203ENST00000415825 GATA4P43694 442 aa7.78□□□□□ -1.16
TRAPPC13-203ENST00000415825 LINC00114Q6XXX2 140 aa7.78□□□□□ -1.16
TRAPPC13-203ENST00000415825 C1orf229Q6ZS94 237 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC13-203ENST00000415825 CD163Q86VB7 1156 aa7.78□□□□□ -1.16
TRAPPC13-203ENST00000415825 NEURL1BA8MQ27 555 aa7.77□□□□□ -1.17
TRAPPC13-203ENST00000415825 IL2RAP01589 272 aa7.77□□□□□ -1.17
TRAPPC13-203ENST00000415825 C4orf17Q53FE4 359 aa7.77□□□□□ -1.17
TRAPPC13-203ENST00000415825 RHBDD1Q8TEB9 315 aa7.77□□□□□ -1.17
TRAPPC13-203ENST00000415825 KRTAP4-8Q9BYQ9 185 aa7.77□□□□□ -1.17
TRAPPC13-203ENST00000415825 DOC2BQ14184 412 aa7.76□□□□□ -1.17
TRAPPC13-203ENST00000415825 SIRT1Q96EB6 747 aa7.76□□□□□ -1.17
TRAPPC13-203ENST00000415825 PRR12Q9ULL5 1215 aa7.76□□□□□ -1.17
TRAPPC13-203ENST00000415825 GJA3Q9Y6H8 435 aa7.76□□□□□ -1.17
TRAPPC13-203ENST00000415825 CTBSQ01459 385 aa7.75□□□□□ -1.17
TRAPPC13-203ENST00000415825 USP4Q13107 963 aa7.75□□□□□ -1.17
TRAPPC13-203ENST00000415825 TLR1Q15399 786 aa7.75□□□□□ -1.17
TRAPPC13-203ENST00000415825 PRRT3Q5FWE3 981 aa7.75□□□□□ -1.17
TRAPPC13-203ENST00000415825 CHSY3Q70JA7 882 aa7.75□□□□□ -1.17
TRAPPC13-203ENST00000415825 C1orf216Q8TAB5 229 aa7.75□□□□□ -1.17
TRAPPC13-203ENST00000415825 XAGE2Q96GT9 111 aa7.75□□□□□ -1.17
TRAPPC13-203ENST00000415825 PCDHGC4Q9Y5F7 938 aa7.75□□□□□ -1.17
TRAPPC13-203ENST00000415825 BNIP3LO60238 219 aa7.74□□□□□ -1.17
TRAPPC13-203ENST00000415825 APBA3O96018 575 aa7.74□□□□□ -1.17
TRAPPC13-203ENST00000415825 SPATA31C1P0DKV0 1188 aa7.74□□□□□ -1.17
TRAPPC13-203ENST00000415825 CHRNA4P43681 627 aa7.74□□□□□ -1.17
TRAPPC13-203ENST00000415825 DGKGP49619 791 aa7.74□□□□□ -1.17
TRAPPC13-203ENST00000415825 AIDAQ96BJ3 306 aa7.74□□□□□ -1.17
TRAPPC13-203ENST00000415825 CRISPLD1Q9H336 500 aa7.74□□□□□ -1.17
TRAPPC13-203ENST00000415825 ALAS2P22557 587 aa7.73□□□□□ -1.17
TRAPPC13-203ENST00000415825 PLA2G4AP47712 749 aa7.73□□□□□ -1.17
TRAPPC13-203ENST00000415825 NBPF1Q3BBV0 1214 aa7.73□□□□□ -1.17
TRAPPC13-203ENST00000415825 ARSJQ5FYB0 599 aaPredicted RBP7.73□□□□□ -1.17
TRAPPC13-203ENST00000415825 NBPF11Q86T75 865 aa7.73□□□□□ -1.17
TRAPPC13-203ENST00000415825 NLRP8Q86W28 1048 aa7.73□□□□□ -1.17
TRAPPC13-203ENST00000415825 GOPCQ9HD26 462 aa7.73□□□□□ -1.17
TRAPPC13-203ENST00000415825 AVENQ9NQS1 362 aaPredicted RBP7.73□□□□□ -1.17
TRAPPC13-203ENST00000415825 NDUFB9Q9Y6M9 179 aa7.73□□□□□ -1.17
TRAPPC13-203ENST00000415825 C2CD2LO14523 706 aa7.72□□□□□ -1.17
TRAPPC13-203ENST00000415825 ATXN7O15265 892 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC13-203ENST00000415825 THBS1P07996 1170 aa7.72□□□□□ -1.17
TRAPPC13-203ENST00000415825 TATP17735 454 aaPredicted RBP7.71□□□□□ -1.18
TRAPPC13-203ENST00000415825 PPARGC1BQ86YN6 1023 aaKnown RBP7.71□□□□□ -1.18
TRAPPC13-203ENST00000415825 NIFKQ9BYG3 293 aaKnown RBP7.71□□□□□ -1.18
TRAPPC13-203ENST00000415825 ZCCHC2Q9C0B9 1178 aaKnown RBP7.71□□□□□ -1.18
TRAPPC13-203ENST00000415825 PRM3Q9NNZ6 103 aa7.71□□□□□ -1.18
TRAPPC13-203ENST00000415825 DOLKQ9UPQ8 538 aa7.71□□□□□ -1.18
TRAPPC13-203ENST00000415825 NACC1Q96RE7 527 aa7.7□□□□□ -1.18
TRAPPC13-203ENST00000415825 PLVAPQ9BX97 442 aa7.7□□□□□ -1.18
TRAPPC13-203ENST00000415825 FHDC1Q9C0D6 1143 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC13-203ENST00000415825 DCDC2BA2VCK2 349 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms