RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 BMP2KLQ5H9B9 411 aa15.1■□□□□ 0.01
RNF43-201ENST00000407977 SMARCC1Q92922 1105 aaPredicted RBP15.1■□□□□ 0.01
RNF43-201ENST00000407977 CCDC196A0A1B0GTZ2 297 aa15.09■□□□□ 0.01
RNF43-201ENST00000407977 TATP17735 454 aaPredicted RBP15.09■□□□□ 0.01
RNF43-201ENST00000407977 FERMT3Q86UX7 667 aa15.09■□□□□ 0.01
RNF43-201ENST00000407977 IL1RAPL2Q9NP60 686 aa15.09■□□□□ 0.01
RNF43-201ENST00000407977 C9orf84Q5VXU9 1444 aa15.09■□□□□ 0.01
RNF43-201ENST00000407977 FGFR1OPO95684 399 aaKnown RBP15.09■□□□□ 0.01
RNF43-201ENST00000407977 ZHX3Q9H4I2 956 aa15.09■□□□□ 0.01
RNF43-201ENST00000407977 TUBB4AP04350 444 aa15.09■□□□□ 0.01
RNF43-201ENST00000407977 STX1AQ16623 288 aa15.09■□□□□ 0.01
RNF43-201ENST00000407977 VPS36Q86VN1 386 aa15.09■□□□□ 0.01
RNF43-201ENST00000407977 CCDC171Q6TFL3 1326 aa15.09■□□□□ 0.01
RNF43-201ENST00000407977 GOLGA6L10A0A0M3HER8 536 aa15.09■□□□□ 0.01
RNF43-201ENST00000407977 C16orf45Q96MC5 204 aaPredicted RBP15.09■□□□□ 0.01
RNF43-201ENST00000407977 PPP1R12BO60237 982 aaPredicted RBP15.09■□□□□ 0.01
RNF43-201ENST00000407977 BAG4O95429 457 aaKnown RBP15.09■□□□□ 0.01
RNF43-201ENST00000407977 ADCY5O95622 1261 aa15.09■□□□□ 0.01
RNF43-201ENST00000407977 CCDC150Q8NCX0 1101 aa15.09■□□□□ 0.01
RNF43-201ENST00000407977 TIGD1Q96MW7 591 aa15.09■□□□□ 0.01
RNF43-201ENST00000407977 TBC1D32Q96NH3 1257 aa15.09■□□□□ 0.01
RNF43-201ENST00000407977 DESP17661 470 aa15.08■□□□□ 0.01
RNF43-201ENST00000407977 ATF3P18847 181 aa15.08■□□□□ 0.01
RNF43-201ENST00000407977 SMC1AQ14683 1233 aaKnown RBP15.08■□□□□ 0.01
RNF43-201ENST00000407977 NAA15Q9BXJ9 866 aaKnown RBP15.08■□□□□ 0.01
RNF43-201ENST00000407977 UBE2HP62256 183 aa15.08■□□□□ 0
RNF43-201ENST00000407977 YEATS4O95619 227 aa15.08■□□□□ 0
RNF43-201ENST00000407977 KRT222Q8N1A0 295 aa15.08■□□□□ 0
RNF43-201ENST00000407977 ARHGAP5Q13017 1502 aa15.07■□□□□ 0
RNF43-201ENST00000407977 LUZP1Q86V48 1076 aa15.07■□□□□ 0
RNF43-201ENST00000407977 GCOM1H8Y6P7 765 aaPredicted RBP15.07■□□□□ 0
RNF43-201ENST00000407977 MYZAPP0CAP1 466 aa15.07■□□□□ 0
RNF43-201ENST00000407977 SAMD1Q6SPF0 538 aaPredicted RBP15.07■□□□□ 0
RNF43-201ENST00000407977 TDO2P48775 406 aa15.07■□□□□ 0
RNF43-201ENST00000407977 FKBP4Q02790 459 aaKnown RBP eCLIP15.07■□□□□ 0
RNF43-201ENST00000407977 SNW1Q13573 536 aaKnown RBP15.07■□□□□ 0
RNF43-201ENST00000407977 TMEM132AQ24JP5 1023 aa15.07■□□□□ 0
RNF43-201ENST00000407977 CDK19Q9BWU1 502 aa15.07■□□□□ 0
RNF43-201ENST00000407977 PRPF40BQ6NWY9 871 aaKnown RBP15.07■□□□□ 0
RNF43-201ENST00000407977 ZNF530Q6P9A1 599 aaPredicted RBP15.07■□□□□ 0
RNF43-201ENST00000407977 POLR3GO15318 223 aaPredicted RBP15.06■□□□□ 0
RNF43-201ENST00000407977 GTF2F1P35269 517 aaKnown RBP eCLIP15.06■□□□□ 05e-8■■■■□ 25.1
RNF43-201ENST00000407977 C8orf76Q96K31 380 aa15.06■□□□□ 0
RNF43-201ENST00000407977 HS1BP3Q53T59 392 aa15.06■□□□□ 0
RNF43-201ENST00000407977 CABP1Q9NZU7 370 aa15.06■□□□□ 0
RNF43-201ENST00000407977 EXOC6BQ9Y2D4 811 aa15.06■□□□□ 0
RNF43-201ENST00000407977 POTEJP0CG39 1038 aa15.06■□□□□ 0
RNF43-201ENST00000407977 SSH1Q8WYL5 1049 aa15.06■□□□□ 0
RNF43-201ENST00000407977 SLC52A1Q9NWF4 448 aa15.06■□□□□ 0
RNF43-201ENST00000407977 LRSAM1Q6UWE0 723 aa15.06■□□□□ 0
RNF43-201ENST00000407977 IFFO1Q0D2I5 559 aa15.05■□□□□ -0
RNF43-201ENST00000407977 SEPT11Q9NVA2 429 aaKnown RBP15.05■□□□□ -0
RNF43-201ENST00000407977 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.05■□□□□ -0
RNF43-201ENST00000407977 ZNF165P49910 485 aa15.05■□□□□ -0
RNF43-201ENST00000407977 CEP135Q66GS9 1140 aa15.05■□□□□ -0
RNF43-201ENST00000407977 TSG101Q99816 390 aa15.05■□□□□ -0
RNF43-201ENST00000407977 SPG7Q9UQ90 795 aa15.05■□□□□ -0
RNF43-201ENST00000407977 KIF20AO95235 890 aa15.05■□□□□ -0
RNF43-201ENST00000407977 MPHOSPH8Q99549 860 aa15.05■□□□□ -0
RNF43-201ENST00000407977 STX6O43752 255 aa15.04■□□□□ -0
RNF43-201ENST00000407977 CCDC175P0C221 793 aa15.04■□□□□ -0
RNF43-201ENST00000407977 NUTM2GQ5VZR2 741 aa15.04■□□□□ -0
RNF43-201ENST00000407977 PYM1Q9BRP8 204 aaKnown RBP15.04■□□□□ -0
RNF43-201ENST00000407977 ZMYND15Q9H091 742 aa15.04■□□□□ -0
RNF43-201ENST00000407977 IVLP07476 585 aa15.04■□□□□ -0
RNF43-201ENST00000407977 EHBP1Q8NDI1 1231 aa15.04■□□□□ -0
RNF43-201ENST00000407977 AKAP2Q9Y2D5 859 aa15.04■□□□□ -0
RNF43-201ENST00000407977 SSBP05455 408 aaKnown RBP eCLIP15.04■□□□□ -0
RNF43-201ENST00000407977 CACNA2D4Q7Z3S7 1137 aa15.04■□□□□ -0
RNF43-201ENST00000407977 NUTM1Q86Y26 1132 aa15.04■□□□□ -0
RNF43-201ENST00000407977 ALS2CR12Q96Q35 445 aa15.04■□□□□ -0
RNF43-201ENST00000407977 SYNJ2O15056 1496 aa15.04■□□□□ -0
RNF43-201ENST00000407977 GIGYF2Q6Y7W6 1299 aaKnown RBP15.03■□□□□ -0
RNF43-201ENST00000407977 C11orf95C9JLR9 678 aaPredicted RBP15.03■□□□□ -0
RNF43-201ENST00000407977 C20orf194Q5TEA3 1177 aa15.03■□□□□ -0
RNF43-201ENST00000407977 PRDM2Q13029 1718 aa15.03■□□□□ -0
RNF43-201ENST00000407977 TRMT1Q9NXH9 659 aaKnown RBP15.03■□□□□ -0
RNF43-201ENST00000407977 TIAM1Q13009 1591 aa15.03■□□□□ -0
RNF43-201ENST00000407977 ZSCAN23Q3MJ62 389 aa15.03■□□□□ -0
RNF43-201ENST00000407977 RNF187Q5TA31 235 aaPredicted RBP15.03■□□□□ -0
RNF43-201ENST00000407977 CTR9Q6PD62 1173 aa15.03■□□□□ -0
RNF43-201ENST00000407977 TAOK3Q9H2K8 898 aa15.03■□□□□ -0
RNF43-201ENST00000407977 NSD3Q9BZ95 1437 aa15.03■□□□□ -0
RNF43-201ENST00000407977 RTEL1-TNFRSF6BF6WH68 1400 aa15.03■□□□□ -0
RNF43-201ENST00000407977 CABP4P57796 275 aa15.03■□□□□ -0
RNF43-201ENST00000407977 SPECC1LQ69YQ0 1117 aa15.03■□□□□ -0
RNF43-201ENST00000407977 AIDAQ96BJ3 306 aa15.03■□□□□ -0
RNF43-201ENST00000407977 TUBB4BP68371 445 aa15.02■□□□□ -0
RNF43-201ENST00000407977 FSIP1Q8NA03 581 aa15.02■□□□□ -0
RNF43-201ENST00000407977 KANK3Q6NY19 840 aa15.02■□□□□ -0
RNF43-201ENST00000407977 CKAP2LQ8IYA6 745 aa15.02■□□□□ -0
RNF43-201ENST00000407977 CNNM3Q8NE01 707 aa15.02■□□□□ -0
RNF43-201ENST00000407977 SRRTQ9BXP5 876 aaKnown RBP15.02■□□□□ -0
RNF43-201ENST00000407977 GTPBP4Q9BZE4 634 aaKnown RBP15.02□□□□□ -0.01
RNF43-201ENST00000407977 ZNF287Q9HBT7 754 aa15.02□□□□□ -0.01
RNF43-201ENST00000407977 NUP88Q99567 741 aaPredicted RBP15.02□□□□□ -0.01
RNF43-201ENST00000407977 RAI14Q9P0K7 980 aa15.02□□□□□ -0.01
RNF43-201ENST00000407977 TMC6Q7Z403 805 aa15.01□□□□□ -0.01
RNF43-201ENST00000407977 RAB34Q9BZG1 259 aa15.01□□□□□ -0.01
RNF43-201ENST00000407977 DAPK1P53355 1430 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms