RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 POTEB2H3BUK9 544 aa13.13□□□□□ -0.31
LAMA3-203ENST00000399516 ATP2B2Q01814 1243 aa13.13□□□□□ -0.31
LAMA3-203ENST00000399516 NFE2L2Q16236 605 aa13.13□□□□□ -0.31
LAMA3-203ENST00000399516 RBM42Q9BTD8 480 aaKnown RBP13.13□□□□□ -0.31
LAMA3-203ENST00000399516 EXOC6BQ9Y2D4 811 aa13.13□□□□□ -0.31
LAMA3-203ENST00000399516 BMP2KQ9NSY1 1161 aaPredicted RBP13.12□□□□□ -0.31
LAMA3-203ENST00000399516 NCAPD3P42695 1498 aa13.12□□□□□ -0.31
LAMA3-203ENST00000399516 DYNC1I1O14576 645 aa13.12□□□□□ -0.31
LAMA3-203ENST00000399516 STX1AQ16623 288 aa13.12□□□□□ -0.31
LAMA3-203ENST00000399516 SMARCA5O60264 1052 aaPredicted RBP13.12□□□□□ -0.31
LAMA3-203ENST00000399516 RAB11FIP3O75154 756 aa13.12□□□□□ -0.31
LAMA3-203ENST00000399516 SSBP05455 408 aaKnown RBP eCLIP13.12□□□□□ -0.31
LAMA3-203ENST00000399516 RARSP54136 660 aaKnown RBP13.12□□□□□ -0.31
LAMA3-203ENST00000399516 SKAP1Q86WV1 359 aa13.12□□□□□ -0.31
LAMA3-203ENST00000399516 CAMSAP2Q08AD1 1489 aa13.12□□□□□ -0.31
LAMA3-203ENST00000399516 KIF14Q15058 1648 aa13.12□□□□□ -0.31
LAMA3-203ENST00000399516 TNNT1P13805 278 aa13.12□□□□□ -0.31
LAMA3-203ENST00000399516 U3KPZ7 1027 aaPredicted RBP13.12□□□□□ -0.31
LAMA3-203ENST00000399516 CDK13Q14004 1512 aaKnown RBP13.12□□□□□ -0.31
LAMA3-203ENST00000399516 TMPOP42166 694 aaKnown RBP13.11□□□□□ -0.31
LAMA3-203ENST00000399516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.11□□□□□ -0.31
LAMA3-203ENST00000399516 NAIPQ13075 1403 aa13.11□□□□□ -0.31
LAMA3-203ENST00000399516 BTBD11A6QL63 1104 aa13.11□□□□□ -0.31
LAMA3-203ENST00000399516 TATP17735 454 aaPredicted RBP13.11□□□□□ -0.31
LAMA3-203ENST00000399516 CTAGE5O15320 804 aa13.11□□□□□ -0.31
LAMA3-203ENST00000399516 ESCO1Q5FWF5 840 aa13.11□□□□□ -0.31
LAMA3-203ENST00000399516 CABP4P57796 275 aa13.11□□□□□ -0.31
LAMA3-203ENST00000399516 CKAP2LQ8IYA6 745 aa13.11□□□□□ -0.31
LAMA3-203ENST00000399516 DYDC1Q8WWB3 177 aa13.11□□□□□ -0.31
LAMA3-203ENST00000399516 FAM107BQ9H098 131 aa13.11□□□□□ -0.31
LAMA3-203ENST00000399516 GSDMDP57764 484 aa13.11□□□□□ -0.31
LAMA3-203ENST00000399516 WWC2Q6AWC2 1192 aa13.11□□□□□ -0.31
LAMA3-203ENST00000399516 PRXQ9BXM0 1461 aa13.11□□□□□ -0.31
LAMA3-203ENST00000399516 ADCY5O95622 1261 aa13.1□□□□□ -0.31
LAMA3-203ENST00000399516 DHX29Q7Z478 1369 aaKnown RBP13.1□□□□□ -0.31
LAMA3-203ENST00000399516 MPHOSPH8Q99549 860 aa13.1□□□□□ -0.31
LAMA3-203ENST00000399516 RRS1Q15050 365 aaKnown RBP13.1□□□□□ -0.31
LAMA3-203ENST00000399516 LUZP1Q86V48 1076 aa13.1□□□□□ -0.31
LAMA3-203ENST00000399516 AIDAQ96BJ3 306 aa13.1□□□□□ -0.31
LAMA3-203ENST00000399516 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
LAMA3-203ENST00000399516 PRG4Q92954 1404 aaPredicted RBP13.1□□□□□ -0.31
LAMA3-203ENST00000399516 POLR3GO15318 223 aaPredicted RBP13.1□□□□□ -0.31
LAMA3-203ENST00000399516 NUP88Q99567 741 aaPredicted RBP13.1□□□□□ -0.31
LAMA3-203ENST00000399516 SSH1Q8WYL5 1049 aa13.1□□□□□ -0.31
LAMA3-203ENST00000399516 KIF1BPQ96EK5 621 aa13.09□□□□□ -0.31
LAMA3-203ENST00000399516 PHAXQ9H814 394 aaKnown RBP13.09□□□□□ -0.31
LAMA3-203ENST00000399516 GLRX3O76003 335 aaKnown RBP13.09□□□□□ -0.31
LAMA3-203ENST00000399516 ZHX1Q9UKY1 873 aaPredicted RBP13.09□□□□□ -0.31
LAMA3-203ENST00000399516 URI1O94763 535 aaPredicted RBP13.09□□□□□ -0.31
LAMA3-203ENST00000399516 FKBP15Q5T1M5 1219 aa13.09□□□□□ -0.31
LAMA3-203ENST00000399516 MICALCLQ6ZW33 695 aa13.09□□□□□ -0.31
LAMA3-203ENST00000399516 TXNDC2Q86VQ3 553 aa13.09□□□□□ -0.31
LAMA3-203ENST00000399516 DDX19AQ9NUU7 478 aaKnown RBP13.09□□□□□ -0.31
LAMA3-203ENST00000399516 PPP1R12BO60237 982 aaPredicted RBP13.09□□□□□ -0.31
LAMA3-203ENST00000399516 SPG7Q9UQ90 795 aa13.09□□□□□ -0.31
LAMA3-203ENST00000399516 NCOA1Q15788 1441 aa13.09□□□□□ -0.31
LAMA3-203ENST00000399516 LIMCH1Q9UPQ0 1083 aa13.09□□□□□ -0.31
LAMA3-203ENST00000399516 GTF2F1P35269 517 aaKnown RBP eCLIP13.08□□□□□ -0.31
LAMA3-203ENST00000399516 ZSCAN23Q3MJ62 389 aa13.08□□□□□ -0.31
LAMA3-203ENST00000399516 AFAP1Q8N556 730 aa13.08□□□□□ -0.31
LAMA3-203ENST00000399516 ZNF692Q9BU19 519 aaPredicted RBP13.08□□□□□ -0.31
LAMA3-203ENST00000399516 EPRSP07814 1512 aaKnown RBP13.08□□□□□ -0.31
LAMA3-203ENST00000399516 KLHL10Q6JEL2 608 aa13.08□□□□□ -0.31
LAMA3-203ENST00000399516 CCDC91Q7Z6B0 441 aa13.08□□□□□ -0.31
LAMA3-203ENST00000399516 PRIMPOLQ96LW4 560 aa13.08□□□□□ -0.31
LAMA3-203ENST00000399516 KIF4BQ2VIQ3 1234 aa13.08□□□□□ -0.32
LAMA3-203ENST00000399516 RAI14Q9P0K7 980 aa13.08□□□□□ -0.32
LAMA3-203ENST00000399516 CUL7Q14999 1698 aa13.08□□□□□ -0.32
LAMA3-203ENST00000399516 ALS2CR12Q96Q35 445 aa13.08□□□□□ -0.32
LAMA3-203ENST00000399516 MAP2K1Q02750 393 aaPredicted RBP13.07□□□□□ -0.32
LAMA3-203ENST00000399516 C8orf76Q96K31 380 aa13.07□□□□□ -0.32
LAMA3-203ENST00000399516 IFFO1Q0D2I5 559 aa13.07□□□□□ -0.32
LAMA3-203ENST00000399516 TMC6Q7Z403 805 aa13.07□□□□□ -0.32
LAMA3-203ENST00000399516 VPS36Q86VN1 386 aa13.07□□□□□ -0.32
LAMA3-203ENST00000399516 KRI1Q8N9T8 703 aaKnown RBP13.07□□□□□ -0.32
LAMA3-203ENST00000399516 TRMT1Q9NXH9 659 aaKnown RBP13.07□□□□□ -0.32
LAMA3-203ENST00000399516 YEATS4O95619 227 aa13.07□□□□□ -0.32
LAMA3-203ENST00000399516 PAF1Q8N7H5 531 aa13.07□□□□□ -0.32
LAMA3-203ENST00000399516 CCDC178Q5BJE1 867 aa13.07□□□□□ -0.32
LAMA3-203ENST00000399516 PIBF1Q8WXW3 757 aa13.07□□□□□ -0.32
LAMA3-203ENST00000399516 SNW1Q13573 536 aaKnown RBP13.07□□□□□ -0.32
LAMA3-203ENST00000399516 CTR9Q6PD62 1173 aa13.07□□□□□ -0.32
LAMA3-203ENST00000399516 TBC1D9Q6ZT07 1266 aa13.07□□□□□ -0.32
LAMA3-203ENST00000399516 CCDC113Q9H0I3 377 aa13.07□□□□□ -0.32
LAMA3-203ENST00000399516 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
LAMA3-203ENST00000399516 KLHL40Q2TBA0 621 aa13.06□□□□□ -0.32
LAMA3-203ENST00000399516 CEP135Q66GS9 1140 aa13.06□□□□□ -0.32
LAMA3-203ENST00000399516 RPGRIP1LQ68CZ1 1315 aa13.06□□□□□ -0.32
LAMA3-203ENST00000399516 HMGB1P09429 215 aaKnown RBP13.06□□□□□ -0.32
LAMA3-203ENST00000399516 TSG101Q99816 390 aa13.06□□□□□ -0.32
LAMA3-203ENST00000399516 SEC63Q9UGP8 760 aaKnown RBP13.06□□□□□ -0.32
LAMA3-203ENST00000399516 TBC1D32Q96NH3 1257 aa13.06□□□□□ -0.32
LAMA3-203ENST00000399516 CEP126Q9P2H0 1117 aa13.06□□□□□ -0.32
LAMA3-203ENST00000399516 IDH1O75874 414 aaKnown RBP13.06□□□□□ -0.32
LAMA3-203ENST00000399516 DESP17661 470 aa13.06□□□□□ -0.32
LAMA3-203ENST00000399516 SSR1P43307 286 aaKnown RBP13.06□□□□□ -0.32
LAMA3-203ENST00000399516 RNF187Q5TA31 235 aaPredicted RBP13.06□□□□□ -0.32
LAMA3-203ENST00000399516 IQGAP2Q13576 1575 aa13.06□□□□□ -0.32
LAMA3-203ENST00000399516 STX6O43752 255 aa13.06□□□□□ -0.32
LAMA3-203ENST00000399516 DUSP27Q5VZP5 1158 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms