RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 RLBP1P12271 317 aa16.36■□□□□ 0.21
TRIM39-204ENST00000396548 CACNA1FO60840 1977 aa16.36■□□□□ 0.21
TRIM39-204ENST00000396548 DCAF5Q96JK2 942 aa16.35■□□□□ 0.21
TRIM39-204ENST00000396548 SPATA31A1Q5TZJ5 1347 aa16.35■□□□□ 0.21
TRIM39-204ENST00000396548 NOB1Q9ULX3 412 aaKnown RBP16.35■□□□□ 0.21
TRIM39-204ENST00000396548 EIF4A1P60842 406 aaKnown RBP16.34■□□□□ 0.21
TRIM39-204ENST00000396548 SLC52A2Q9HAB3 445 aa16.34■□□□□ 0.21
TRIM39-204ENST00000396548 C5P01031 1676 aa16.34■□□□□ 0.21
TRIM39-204ENST00000396548 NUTM2BA6NNL0 878 aaPredicted RBP16.34■□□□□ 0.21
TRIM39-204ENST00000396548 NUTM2EB1AL46 878 aaPredicted RBP16.34■□□□□ 0.21
TRIM39-204ENST00000396548 HSPA1LP34931 641 aa16.34■□□□□ 0.21
TRIM39-204ENST00000396548 NUTM2AQ8IVF1 878 aaPredicted RBP16.34■□□□□ 0.21
TRIM39-204ENST00000396548 KIF16BQ96L93 1317 aa16.34■□□□□ 0.21
TRIM39-204ENST00000396548 ZKSCAN2Q63HK3 967 aa16.34■□□□□ 0.21
TRIM39-204ENST00000396548 FRAT1Q92837 279 aaPredicted RBP16.34■□□□□ 0.21
TRIM39-204ENST00000396548 KCNQ3O43525 872 aa16.33■□□□□ 0.21
TRIM39-204ENST00000396548 TRIM27P14373 513 aa16.33■□□□□ 0.21
TRIM39-204ENST00000396548 ARHGAP45Q92619 1136 aa16.33■□□□□ 0.21
TRIM39-204ENST00000396548 RGS12O14924 1447 aa16.33■□□□□ 0.2
TRIM39-204ENST00000396548 SPATA31A5Q5VU36 1347 aa16.33■□□□□ 0.2
TRIM39-204ENST00000396548 SPATA31A7Q8IWB4 1347 aa16.33■□□□□ 0.2
TRIM39-204ENST00000396548 PANK1Q8TE04 598 aa16.33■□□□□ 0.2
TRIM39-204ENST00000396548 BTBD11A6QL63 1104 aa16.32■□□□□ 0.2
TRIM39-204ENST00000396548 HSP90AB1P08238 724 aaKnown RBP16.32■□□□□ 0.2
TRIM39-204ENST00000396548 TEFQ10587 303 aa16.32■□□□□ 0.2
TRIM39-204ENST00000396548 ATF7IPQ6VMQ6 1270 aa16.32■□□□□ 0.2
TRIM39-204ENST00000396548 THRAP3Q9Y2W1 955 aaKnown RBP16.32■□□□□ 0.2
TRIM39-204ENST00000396548 FNBP4Q8N3X1 1017 aaPredicted RBP16.32■□□□□ 0.2
TRIM39-204ENST00000396548 ITGB4P16144 1822 aa16.32■□□□□ 0.2
TRIM39-204ENST00000396548 N4BP2Q86UW6 1770 aaPredicted RBP16.31■□□□□ 0.2
TRIM39-204ENST00000396548 TNS2Q63HR2 1409 aa16.31■□□□□ 0.2
TRIM39-204ENST00000396548 HOXB7P09629 217 aa16.3■□□□□ 0.2
TRIM39-204ENST00000396548 B4GALNT3Q6L9W6 998 aa16.3■□□□□ 0.2
TRIM39-204ENST00000396548 NFATC2IPQ8NCF5 419 aa16.3■□□□□ 0.2
TRIM39-204ENST00000396548 USP35Q9P2H5 1018 aa16.3■□□□□ 0.2
TRIM39-204ENST00000396548 UNC5CLQ8IV45 518 aa16.29■□□□□ 0.2
TRIM39-204ENST00000396548 DZIP1LQ8IYY4 767 aaKnown RBP16.29■□□□□ 0.2
TRIM39-204ENST00000396548 ABCC4O15439 1325 aa16.29■□□□□ 0.2
TRIM39-204ENST00000396548 LAMB4A4D0S4 1761 aa16.29■□□□□ 0.2
TRIM39-204ENST00000396548 ERVV-2B6SEH9 535 aa16.28■□□□□ 0.2
TRIM39-204ENST00000396548 TCERG1O14776 1098 aaKnown RBP16.28■□□□□ 0.2
TRIM39-204ENST00000396548 BARGINQ6ZT62 677 aa16.28■□□□□ 0.2
TRIM39-204ENST00000396548 KCPQ6ZWJ8 1503 aa16.28■□□□□ 0.2
TRIM39-204ENST00000396548 THSD7AQ9UPZ6 1657 aa16.28■□□□□ 0.2
TRIM39-204ENST00000396548 IPO8O15397 1037 aaKnown RBP16.28■□□□□ 0.2
TRIM39-204ENST00000396548 CANXP27824 592 aaKnown RBP16.28■□□□□ 0.2
TRIM39-204ENST00000396548 COG6Q9Y2V7 657 aa16.28■□□□□ 0.2
TRIM39-204ENST00000396548 MVPQ14764 893 aaKnown RBP16.27■□□□□ 0.2
TRIM39-204ENST00000396548 CDCA7Q9BWT1 371 aaPredicted RBP16.27■□□□□ 0.2
TRIM39-204ENST00000396548 MS4A1P11836 297 aa16.27■□□□□ 0.19
TRIM39-204ENST00000396548 VPS72Q15906 364 aa16.27■□□□□ 0.19
TRIM39-204ENST00000396548 ZNF790Q6PG37 636 aa16.27■□□□□ 0.19
TRIM39-204ENST00000396548 GIGYF1O75420 1035 aaPredicted RBP16.26■□□□□ 0.19
TRIM39-204ENST00000396548 CLUAP1Q96AJ1 413 aa16.26■□□□□ 0.19
TRIM39-204ENST00000396548 DOT1LQ8TEK3 1739 aa16.26■□□□□ 0.19
TRIM39-204ENST00000396548 C8orf37Q96NL8 207 aa16.25■□□□□ 0.19
TRIM39-204ENST00000396548 PTPRCP08575 1304 aa16.25■□□□□ 0.19
TRIM39-204ENST00000396548 CCDC30Q5VVM6 783 aa16.25■□□□□ 0.19
TRIM39-204ENST00000396548 TMEM57Q8N5G2 664 aa16.25■□□□□ 0.19
TRIM39-204ENST00000396548 DDX54Q8TDD1 881 aaKnown RBP16.25■□□□□ 0.19
TRIM39-204ENST00000396548 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
TRIM39-204ENST00000396548 AAMPQ13685 434 aa16.24■□□□□ 0.19
TRIM39-204ENST00000396548 SLC39A6Q13433 755 aa16.24■□□□□ 0.19
TRIM39-204ENST00000396548 G2E3Q7L622 706 aa16.24■□□□□ 0.19
TRIM39-204ENST00000396548 CABP4P57796 275 aa16.24■□□□□ 0.19
TRIM39-204ENST00000396548 CCDC136Q96JN2 1154 aa16.24■□□□□ 0.19
TRIM39-204ENST00000396548 KDM2BQ8NHM5 1336 aa16.23■□□□□ 0.19
TRIM39-204ENST00000396548 NGLY1Q96IV0 654 aa16.23■□□□□ 0.19
TRIM39-204ENST00000396548 PRAMEF22A3QJZ6 481 aa16.23■□□□□ 0.19
TRIM39-204ENST00000396548 API5Q9BZZ5 524 aaKnown RBP16.22■□□□□ 0.19
TRIM39-204ENST00000396548 EXOC5O00471 708 aa16.22■□□□□ 0.19
TRIM39-204ENST00000396548 FTSJ3Q8IY81 847 aaKnown RBP16.22■□□□□ 0.19
TRIM39-204ENST00000396548 ATRNO75882 1429 aa16.21■□□□□ 0.19
TRIM39-204ENST00000396548 HDGFL1Q5TGJ6 251 aa16.21■□□□□ 0.19
TRIM39-204ENST00000396548 ZNF496Q96IT1 587 aaPredicted RBP16.21■□□□□ 0.19
TRIM39-204ENST00000396548 BCL9O00512 1426 aa16.21■□□□□ 0.19
TRIM39-204ENST00000396548 INTS3Q68E01 1043 aaKnown RBP16.21■□□□□ 0.19
TRIM39-204ENST00000396548 ZBTB40Q9NUA8 1239 aa16.2■□□□□ 0.18
TRIM39-204ENST00000396548 DDX19BQ9UMR2 479 aa16.2■□□□□ 0.18
TRIM39-204ENST00000396548 PXDNLA1KZ92 1463 aa16.2■□□□□ 0.18
TRIM39-204ENST00000396548 ZBTB7BO15156 539 aaPredicted RBP16.2■□□□□ 0.18
TRIM39-204ENST00000396548 PDIA6Q15084 440 aa16.2■□□□□ 0.18
TRIM39-204ENST00000396548 USP21Q9UK80 565 aa16.2■□□□□ 0.18
TRIM39-204ENST00000396548 CICQ96RK0 1608 aaPredicted RBP16.19■□□□□ 0.18
TRIM39-204ENST00000396548 MARCH10Q8NA82 808 aaPredicted RBP16.19■□□□□ 0.18
TRIM39-204ENST00000396548 STK31Q9BXU1 1019 aa16.19■□□□□ 0.18
TRIM39-204ENST00000396548 FLIIQ13045 1269 aa16.18■□□□□ 0.18
TRIM39-204ENST00000396548 NECTIN2Q92692 538 aa16.18■□□□□ 0.18
TRIM39-204ENST00000396548 CHPF2Q9P2E5 772 aa16.18■□□□□ 0.18
TRIM39-204ENST00000396548 DDB1Q16531 1140 aa16.18■□□□□ 0.18
TRIM39-204ENST00000396548 PIGBQ92521 554 aa16.18■□□□□ 0.18
TRIM39-204ENST00000396548 CHMP4AQ9BY43 222 aa16.18■□□□□ 0.18
TRIM39-204ENST00000396548 PCDHB15Q9Y5E8 787 aa16.18■□□□□ 0.18
TRIM39-204ENST00000396548 LRP10Q7Z4F1 713 aa16.18■□□□□ 0.18
TRIM39-204ENST00000396548 ITPRIPQ8IWB1 547 aa16.18■□□□□ 0.18
TRIM39-204ENST00000396548 FMNL2Q96PY5 1086 aa16.18■□□□□ 0.18
TRIM39-204ENST00000396548 PHAXQ9H814 394 aaKnown RBP16.17■□□□□ 0.18
TRIM39-204ENST00000396548 TJP1Q07157 1748 aa16.16■□□□□ 0.18
TRIM39-204ENST00000396548 EIF2S2P20042 333 aaKnown RBP16.16■□□□□ 0.18
TRIM39-204ENST00000396548 AFF2P51816 1311 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms