RNA–Protein interactions for RNA: ENST00000395833.7

LMO2-202, Transcript of LIM domain only 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO2, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-202ENST00000395833 HSP90AB1P08238 724 aaKnown RBP37.58■■■■□ 3.61
LMO2-202ENST00000395833 MVPQ14764 893 aaKnown RBP37.57■■■■□ 3.61
LMO2-202ENST00000395833 SCN11AQ9UI33 1791 aa37.57■■■■□ 3.6
LMO2-202ENST00000395833 ARHGAP45Q92619 1136 aa37.56■■■■□ 3.6
LMO2-202ENST00000395833 SOS1Q07889 1333 aaPredicted RBP37.56■■■■□ 3.6
LMO2-202ENST00000395833 PCDH11XQ9BZA7 1347 aa37.56■■■■□ 3.6
LMO2-202ENST00000395833 PCDH11YQ9BZA8 1340 aa37.56■■■■□ 3.6
LMO2-202ENST00000395833 PLCH1Q4KWH8 1693 aa37.56■■■■□ 3.6
LMO2-202ENST00000395833 DCAF5Q96JK2 942 aa37.54■■■■□ 3.6
LMO2-202ENST00000395833 SIPA1L3O60292 1781 aaPredicted RBP37.54■■■■□ 3.6
LMO2-202ENST00000395833 EIF4A1P60842 406 aaKnown RBP37.53■■■■□ 3.6
LMO2-202ENST00000395833 KCNQ3O43525 872 aa37.52■■■■□ 3.6
LMO2-202ENST00000395833 ITPRIPQ8IWB1 547 aa37.52■■■■□ 3.6
LMO2-202ENST00000395833 SLC52A2Q9HAB3 445 aa37.52■■■■□ 3.6
LMO2-202ENST00000395833 TMEM57Q8N5G2 664 aa37.51■■■■□ 3.6
LMO2-202ENST00000395833 API5Q9BZZ5 524 aaKnown RBP37.51■■■■□ 3.6
LMO2-202ENST00000395833 JCADQ9P266 1359 aa37.51■■■■□ 3.59
LMO2-202ENST00000395833 AAMPQ13685 434 aa37.5■■■■□ 3.59
LMO2-202ENST00000395833 CCDC30Q5VVM6 783 aa37.5■■■■□ 3.59
LMO2-202ENST00000395833 STK31Q9BXU1 1019 aa37.5■■■■□ 3.59
LMO2-202ENST00000395833 SLC4A2P04920 1241 aa37.48■■■■□ 3.59
LMO2-202ENST00000395833 DDX19BQ9UMR2 479 aa37.47■■■■□ 3.59
LMO2-202ENST00000395833 MRC1P22897 1456 aa37.46■■■■□ 3.59
LMO2-202ENST00000395833 NECTIN2Q92692 538 aa37.46■■■■□ 3.59
LMO2-202ENST00000395833 NRAPQ86VF7 1730 aa37.45■■■■□ 3.59
LMO2-202ENST00000395833 DDX54Q8TDD1 881 aaKnown RBP37.45■■■■□ 3.59
LMO2-202ENST00000395833 NFATC2IPQ8NCF5 419 aa37.44■■■■□ 3.58
LMO2-202ENST00000395833 HOXB7P09629 217 aa37.44■■■■□ 3.58
LMO2-202ENST00000395833 HDGFL1Q5TGJ6 251 aa37.44■■■■□ 3.58
LMO2-202ENST00000395833 SHANK3Q9BYB0 1731 aa37.43■■■■□ 3.58
LMO2-202ENST00000395833 ABCC4O15439 1325 aa37.43■■■■□ 3.58
LMO2-202ENST00000395833 PTPRCP08575 1304 aa37.43■■■■□ 3.58
LMO2-202ENST00000395833 CABP4P57796 275 aa37.43■■■■□ 3.58
LMO2-202ENST00000395833 DISP2A7MBM2 1401 aa37.41■■■■□ 3.58
LMO2-202ENST00000395833 CHMP4AQ9BY43 222 aa37.4■■■■□ 3.58
LMO2-202ENST00000395833 EIF2S2P20042 333 aaKnown RBP37.38■■■■□ 3.57
LMO2-202ENST00000395833 SLC39A6Q13433 755 aa37.38■■■■□ 3.57
LMO2-202ENST00000395833 NKX1-1Q15270 411 aaPredicted RBP37.38■■■■□ 3.57
LMO2-202ENST00000395833 NWD2Q9ULI1 1742 aa37.38■■■■□ 3.57
LMO2-202ENST00000395833 ZNF790Q6PG37 636 aa37.37■■■■□ 3.57
LMO2-202ENST00000395833 CENPQQ7L2Z9 268 aaPredicted RBP37.37■■■■□ 3.57
LMO2-202ENST00000395833 SLIT2O94813 1529 aa37.37■■■■□ 3.57
LMO2-202ENST00000395833 G2E3Q7L622 706 aa37.37■■■■□ 3.57
LMO2-202ENST00000395833 KDM2BQ8NHM5 1336 aa37.36■■■■□ 3.57
LMO2-202ENST00000395833 RGS12O14924 1447 aa37.35■■■■□ 3.57
LMO2-202ENST00000395833 WNK3Q9BYP7 1800 aa37.34■■■■□ 3.57
LMO2-202ENST00000395833 SPATA31A1Q5TZJ5 1347 aa37.34■■■■□ 3.57
LMO2-202ENST00000395833 HEG1Q9ULI3 1381 aa37.34■■■■□ 3.57
LMO2-202ENST00000395833 ERVV-2B6SEH9 535 aa37.34■■■■□ 3.57
LMO2-202ENST00000395833 TTC5Q8N0Z6 440 aa37.34■■■■□ 3.57
LMO2-202ENST00000395833 GIGYF1O75420 1035 aaPredicted RBP37.33■■■■□ 3.57
LMO2-202ENST00000395833 CCDC9Q9Y3X0 531 aaKnown RBP37.32■■■■□ 3.57
LMO2-202ENST00000395833 SPATA31A6Q5VVP1 1343 aa37.32■■■■□ 3.56
LMO2-202ENST00000395833 FLIIQ13045 1269 aa37.31■■■■□ 3.56
LMO2-202ENST00000395833 C8orf37Q96NL8 207 aa37.31■■■■□ 3.56
LMO2-202ENST00000395833 CHMP4BQ9H444 224 aaKnown RBP37.31■■■■□ 3.56
LMO2-202ENST00000395833 PCDHB15Q9Y5E8 787 aa37.31■■■■□ 3.56
LMO2-202ENST00000395833 CACNA1FO60840 1977 aa37.31■■■■□ 3.56
LMO2-202ENST00000395833 THRAP3Q9Y2W1 955 aaKnown RBP37.31■■■■□ 3.56
LMO2-202ENST00000395833 NGLY1Q96IV0 654 aa37.3■■■■□ 3.56
LMO2-202ENST00000395833 HSPA1LP34931 641 aa37.29■■■■□ 3.56
LMO2-202ENST00000395833 CDCA7Q9BWT1 371 aaPredicted RBP37.29■■■■□ 3.56
LMO2-202ENST00000395833 EXOC5O00471 708 aa37.28■■■■□ 3.56
LMO2-202ENST00000395833 ZBTB40Q9NUA8 1239 aa37.28■■■■□ 3.56
LMO2-202ENST00000395833 SPATA31A5Q5VU36 1347 aa37.28■■■■□ 3.56
LMO2-202ENST00000395833 SPATA31A7Q8IWB4 1347 aa37.28■■■■□ 3.56
LMO2-202ENST00000395833 CHPF2Q9P2E5 772 aa37.28■■■■□ 3.56
LMO2-202ENST00000395833 FKBP5Q13451 457 aaPredicted RBP37.27■■■■□ 3.56
LMO2-202ENST00000395833 INTS3Q68E01 1043 aaKnown RBP37.27■■■■□ 3.56
LMO2-202ENST00000395833 IGHDP01880 384 aa37.26■■■■□ 3.56
LMO2-202ENST00000395833 UNC5CLQ8IV45 518 aa37.26■■■■□ 3.56
LMO2-202ENST00000395833 PRAMEF22A3QJZ6 481 aa37.25■■■■□ 3.55
LMO2-202ENST00000395833 TNS2Q63HR2 1409 aa37.25■■■■□ 3.55
LMO2-202ENST00000395833 ZBTB7BO15156 539 aaPredicted RBP37.25■■■■□ 3.55
LMO2-202ENST00000395833 ZNF496Q96IT1 587 aaPredicted RBP37.25■■■■□ 3.55
LMO2-202ENST00000395833 FMNL2Q96PY5 1086 aa37.24■■■■□ 3.55
LMO2-202ENST00000395833 LRP6O75581 1613 aa37.23■■■■□ 3.55
LMO2-202ENST00000395833 TOGARAM1Q9Y4F4 1720 aa37.23■■■■□ 3.55
LMO2-202ENST00000395833 F6X3S4 739 aa37.22■■■■□ 3.55
LMO2-202ENST00000395833 DBF4Q9UBU7 674 aaPredicted RBP37.22■■■■□ 3.55
LMO2-202ENST00000395833 SLC4A10Q6U841 1118 aa37.21■■■■□ 3.55
LMO2-202ENST00000395833 RWDD1Q9H446 243 aaPredicted RBP37.21■■■■□ 3.55
LMO2-202ENST00000395833 PHAXQ9H814 394 aaKnown RBP37.21■■■■□ 3.55
LMO2-202ENST00000395833 C5P01031 1676 aa37.2■■■■□ 3.55
LMO2-202ENST00000395833 TMOD3Q9NYL9 352 aa37.2■■■■□ 3.55
LMO2-202ENST00000395833 SNRPA1P09661 255 aaKnown RBP37.19■■■■□ 3.54
LMO2-202ENST00000395833 CCT4P50991 539 aaKnown RBP37.18■■■■□ 3.54
LMO2-202ENST00000395833 ANXA1P04083 346 aa37.18■■■■□ 3.54
LMO2-202ENST00000395833 DDB1Q16531 1140 aa37.18■■■■□ 3.54
LMO2-202ENST00000395833 BARGINQ6ZT62 677 aa37.17■■■■□ 3.54
LMO2-202ENST00000395833 BCL9LQ86UU0 1499 aa37.16■■■■□ 3.54
LMO2-202ENST00000395833 MEX3CQ5U5Q3 659 aaKnown RBP37.16■■■■□ 3.54
LMO2-202ENST00000395833 PAPPAQ13219 1627 aa37.15■■■■□ 3.54
LMO2-202ENST00000395833 VPS72Q15906 364 aa37.15■■■■□ 3.54
LMO2-202ENST00000395833 FNBP4Q8N3X1 1017 aaPredicted RBP37.15■■■■□ 3.54
LMO2-202ENST00000395833 C1orf115Q9H7X2 142 aa37.14■■■■□ 3.54
LMO2-202ENST00000395833 PROSER3Q2NL68 480 aa37.12■■■■□ 3.53
LMO2-202ENST00000395833 HYPKQ9NX55 129 aa37.12■■■■□ 3.53
LMO2-202ENST00000395833 DDX21Q9NR30 783 aaKnown RBP eCLIP37.12■■■■□ 3.53
LMO2-202ENST00000395833 PXDNLA1KZ92 1463 aa37.11■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms