RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 BICDL1Q6ZP65 573 aa6.81□□□□□ -1.32
RFX3-204ENST00000382004 PAXIP1Q6ZW49 1069 aaPredicted RBP6.81□□□□□ -1.32
RFX3-204ENST00000382004 NUTM2AQ8IVF1 878 aaPredicted RBP6.81□□□□□ -1.32
RFX3-204ENST00000382004 GAS2L2Q8NHY3 880 aa6.81□□□□□ -1.32
RFX3-204ENST00000382004 PAIP2Q9BPZ3 127 aaKnown RBP6.81□□□□□ -1.32
RFX3-204ENST00000382004 USO1O60763 962 aaKnown RBP6.81□□□□□ -1.32
RFX3-204ENST00000382004 IDH1O75874 414 aaKnown RBP6.81□□□□□ -1.32
RFX3-204ENST00000382004 SLC4A2P04920 1241 aa6.81□□□□□ -1.32
RFX3-204ENST00000382004 CCDC85AQ96PX6 553 aaPredicted RBP6.81□□□□□ -1.32
RFX3-204ENST00000382004 TWISTNBQ3B726 338 aaPredicted RBP6.81□□□□□ -1.32
RFX3-204ENST00000382004 HDGFL1Q5TGJ6 251 aa6.81□□□□□ -1.32
RFX3-204ENST00000382004 SMARCC1Q92922 1105 aaPredicted RBP6.81□□□□□ -1.32
RFX3-204ENST00000382004 GCC1Q96CN9 775 aa6.81□□□□□ -1.32
RFX3-204ENST00000382004 CALCOCO1Q9P1Z2 691 aa6.81□□□□□ -1.32
RFX3-204ENST00000382004 MIA2Q96PC5 1412 aa6.81□□□□□ -1.32
RFX3-204ENST00000382004 NOP2P46087 812 aaKnown RBP6.81□□□□□ -1.32
RFX3-204ENST00000382004 A0A1W2PRG0 241 aa6.81□□□□□ -1.32
RFX3-204ENST00000382004 ZNF354CQ86Y25 554 aa6.81□□□□□ -1.32
RFX3-204ENST00000382004 NAP1L3Q99457 506 aaPredicted RBP6.81□□□□□ -1.32
RFX3-204ENST00000382004 TMOD2Q9NZR1 351 aa6.81□□□□□ -1.32
RFX3-204ENST00000382004 EXOSC9Q06265 439 aaKnown RBP6.81□□□□□ -1.32
RFX3-204ENST00000382004 ABCF2Q9UG63 623 aa6.81□□□□□ -1.32
RFX3-204ENST00000382004 ESPNB1AK53 854 aa6.81□□□□□ -1.32
RFX3-204ENST00000382004 PSMC4P43686 418 aa6.81□□□□□ -1.32
RFX3-204ENST00000382004 CTNNA3Q9UI47 895 aa6.81□□□□□ -1.32
RFX3-204ENST00000382004 CCDC18Q5T9S5 1454 aa6.8□□□□□ -1.32
RFX3-204ENST00000382004 MINDY4BA8MYZ0 360 aa6.8□□□□□ -1.32
RFX3-204ENST00000382004 POLR3DP05423 398 aaPredicted RBP6.8□□□□□ -1.32
RFX3-204ENST00000382004 CASTP20810 708 aaKnown RBP6.8□□□□□ -1.32
RFX3-204ENST00000382004 CRACR2BQ8N4Y2 399 aaPredicted RBP6.8□□□□□ -1.32
RFX3-204ENST00000382004 IKBKGQ9Y6K9 419 aa6.8□□□□□ -1.32
RFX3-204ENST00000382004 SOGA1O94964 1423 aa6.8□□□□□ -1.32
RFX3-204ENST00000382004 BCAR3O75815 825 aa6.8□□□□□ -1.32
RFX3-204ENST00000382004 FGFR1OPO95684 399 aaKnown RBP6.8□□□□□ -1.32
RFX3-204ENST00000382004 CCDC6Q16204 474 aa6.8□□□□□ -1.32
RFX3-204ENST00000382004 PRKCSHP14314 528 aaPredicted RBP6.8□□□□□ -1.32
RFX3-204ENST00000382004 TTLL12Q14166 644 aaPredicted RBP6.8□□□□□ -1.32
RFX3-204ENST00000382004 SMG6Q86US8 1419 aaKnown RBP6.8□□□□□ -1.32
RFX3-204ENST00000382004 TATP17735 454 aaPredicted RBP6.8□□□□□ -1.32
RFX3-204ENST00000382004 MTHFSP49914 203 aa6.8□□□□□ -1.32
RFX3-204ENST00000382004 GUCY1B3Q02153 619 aa6.8□□□□□ -1.32
RFX3-204ENST00000382004 PPP6R1Q9UPN7 881 aa6.8□□□□□ -1.32
RFX3-204ENST00000382004 ESCO1Q5FWF5 840 aa6.8□□□□□ -1.32
RFX3-204ENST00000382004 NAA15Q9BXJ9 866 aaKnown RBP6.8□□□□□ -1.32
RFX3-204ENST00000382004 MKNK2Q9HBH9 465 aa6.8□□□□□ -1.32
RFX3-204ENST00000382004 KIF2AO00139 706 aaPredicted RBP6.79□□□□□ -1.32
RFX3-204ENST00000382004 PRC1O43663 620 aa6.79□□□□□ -1.32
RFX3-204ENST00000382004 MNAT1P51948 309 aa6.79□□□□□ -1.32
RFX3-204ENST00000382004 FERMT3Q86UX7 667 aa6.79□□□□□ -1.32
RFX3-204ENST00000382004 AIDAQ96BJ3 306 aa6.79□□□□□ -1.32
RFX3-204ENST00000382004 PRKAR2BP31323 418 aa6.79□□□□□ -1.32
RFX3-204ENST00000382004 OTUD6BQ8N6M0 293 aa6.79□□□□□ -1.32
RFX3-204ENST00000382004 CFAP58Q5T655 872 aa6.79□□□□□ -1.32
RFX3-204ENST00000382004 CCDC82Q8N4S0 544 aa6.79□□□□□ -1.32
RFX3-204ENST00000382004 ZSCAN31Q96LW9 406 aaPredicted RBP6.79□□□□□ -1.32
RFX3-204ENST00000382004 TCERG1LQ5VWI1 586 aa6.79□□□□□ -1.32
RFX3-204ENST00000382004 FERMT1Q9BQL6 677 aa6.79□□□□□ -1.32
RFX3-204ENST00000382004 MTIF2P46199 727 aaKnown RBP6.79□□□□□ -1.32
RFX3-204ENST00000382004 CCT4P50991 539 aaKnown RBP6.79□□□□□ -1.32
RFX3-204ENST00000382004 CNTLNQ9NXG0 1405 aa6.79□□□□□ -1.32
RFX3-204ENST00000382004 CLIP2Q9UDT6 1046 aa6.79□□□□□ -1.32
RFX3-204ENST00000382004 CCDC83Q8IWF9 413 aa6.79□□□□□ -1.32
RFX3-204ENST00000382004 CEP112Q8N8E3 955 aa6.79□□□□□ -1.32
RFX3-204ENST00000382004 SREK1Q8WXA9 508 aaKnown RBP6.79□□□□□ -1.32
RFX3-204ENST00000382004 TSR2Q969E8 191 aaKnown RBP6.79□□□□□ -1.32
RFX3-204ENST00000382004 ALS2CR12Q96Q35 445 aa6.79□□□□□ -1.32
RFX3-204ENST00000382004 MMRN2Q9H8L6 949 aa6.79□□□□□ -1.32
RFX3-204ENST00000382004 ANO10Q9NW15 660 aa6.79□□□□□ -1.32
RFX3-204ENST00000382004 TPD52P55327 224 aaPredicted RBP6.78□□□□□ -1.32
RFX3-204ENST00000382004 TOM1L2Q6ZVM7 507 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 CUL5Q93034 780 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 CEP126Q9P2H0 1117 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 ADAMTS8Q9UP79 889 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 GPRASP1Q5JY77 1395 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 YEATS4O95619 227 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 KRT32Q14532 448 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 IL1RAPL2Q9NP60 686 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 CLGNO14967 610 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 TCP11L2Q8N4U5 519 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 RGS22Q8NE09 1264 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 CDCA7LQ96GN5 454 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 C16orf45Q96MC5 204 aaPredicted RBP6.78□□□□□ -1.32
RFX3-204ENST00000382004 DHX57Q6P158 1386 aaKnown RBP6.78□□□□□ -1.32
RFX3-204ENST00000382004 ACTN2P35609 894 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 ZHX1Q9UKY1 873 aaPredicted RBP6.78□□□□□ -1.32
RFX3-204ENST00000382004 SRGAP3O43295 1099 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 WDHD1O75717 1129 aaPredicted RBP6.78□□□□□ -1.32
RFX3-204ENST00000382004 IGHMBP2P38935 993 aaKnown RBP6.78□□□□□ -1.32
RFX3-204ENST00000382004 TMEM266Q2M3C6 531 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 DNAAF4Q8WXU2 420 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 SYCP3Q8IZU3 236 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 RB1CC1Q8TDY2 1594 aa6.78□□□□□ -1.32
RFX3-204ENST00000382004 MYO1BO43795 1136 aa6.77□□□□□ -1.32
RFX3-204ENST00000382004 SH3BP5O60239 455 aa6.77□□□□□ -1.32
RFX3-204ENST00000382004 HSF2BPO75031 334 aa6.77□□□□□ -1.32
RFX3-204ENST00000382004 TERF1P54274 439 aa6.77□□□□□ -1.32
RFX3-204ENST00000382004 SRCIN1Q9C0H9 1055 aa6.77□□□□□ -1.32
RFX3-204ENST00000382004 ZSWIM4Q9H7M6 989 aa6.77□□□□□ -1.32
RFX3-204ENST00000382004 NDC80O14777 642 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 CETN1Q12798 172 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms