RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 C8orf37Q96NL8 207 aa10.25□□□□□ -0.77
ERCC8-202ENST00000381118 TRIM27P14373 513 aa10.25□□□□□ -0.77
ERCC8-202ENST00000381118 HSPA1LP34931 641 aa10.25□□□□□ -0.77
ERCC8-202ENST00000381118 KIF16BQ96L93 1317 aa10.25□□□□□ -0.77
ERCC8-202ENST00000381118 PCDH11XQ9BZA7 1347 aa10.25□□□□□ -0.77
ERCC8-202ENST00000381118 PCDH11YQ9BZA8 1340 aa10.25□□□□□ -0.77
ERCC8-202ENST00000381118 WNK3Q9BYP7 1800 aa10.24□□□□□ -0.77
ERCC8-202ENST00000381118 PDE3AQ14432 1141 aa10.24□□□□□ -0.77
ERCC8-202ENST00000381118 MRPL50Q8N5N7 158 aaKnown RBP10.24□□□□□ -0.77
ERCC8-202ENST00000381118 NFATC2IPQ8NCF5 419 aa10.24□□□□□ -0.77
ERCC8-202ENST00000381118 CCDC9Q9Y3X0 531 aaKnown RBP10.24□□□□□ -0.77
ERCC8-202ENST00000381118 NWD2Q9ULI1 1742 aa10.24□□□□□ -0.77
ERCC8-202ENST00000381118 ATF7IPQ6VMQ6 1270 aa10.23□□□□□ -0.77
ERCC8-202ENST00000381118 SLC39A6Q13433 755 aa10.23□□□□□ -0.77
ERCC8-202ENST00000381118 DZIP1LQ8IYY4 767 aaKnown RBP10.23□□□□□ -0.77
ERCC8-202ENST00000381118 NGLY1Q96IV0 654 aa10.23□□□□□ -0.77
ERCC8-202ENST00000381118 DCAF5Q96JK2 942 aa10.23□□□□□ -0.77
ERCC8-202ENST00000381118 SLC52A2Q9HAB3 445 aa10.23□□□□□ -0.77
ERCC8-202ENST00000381118 BABAM1Q9NWV8 329 aa10.23□□□□□ -0.77
ERCC8-202ENST00000381118 PLEKHG2Q9H7P9 1386 aa10.22□□□□□ -0.77
ERCC8-202ENST00000381118 MSH5O43196 834 aa10.22□□□□□ -0.77
ERCC8-202ENST00000381118 LRP6O75581 1613 aa10.22□□□□□ -0.77
ERCC8-202ENST00000381118 IPO8O15397 1037 aaKnown RBP10.22□□□□□ -0.77
ERCC8-202ENST00000381118 SLC4A2P04920 1241 aa10.22□□□□□ -0.77
ERCC8-202ENST00000381118 HSP90AB1P08238 724 aaKnown RBP10.22□□□□□ -0.77
ERCC8-202ENST00000381118 EIF2S2P20042 333 aaKnown RBP10.22□□□□□ -0.77
ERCC8-202ENST00000381118 EIF4A1P60842 406 aaKnown RBP10.22□□□□□ -0.77
ERCC8-202ENST00000381118 SLIT2O94813 1529 aa10.21□□□□□ -0.77
ERCC8-202ENST00000381118 CACNA1FO60840 1977 aa10.21□□□□□ -0.77
ERCC8-202ENST00000381118 CABP4P57796 275 aa10.21□□□□□ -0.77
ERCC8-202ENST00000381118 ITPRIPQ8IWB1 547 aa10.21□□□□□ -0.77
ERCC8-202ENST00000381118 SPATA31A1Q5TZJ5 1347 aa10.21□□□□□ -0.78
ERCC8-202ENST00000381118 BRPF1P55201 1214 aaPredicted RBP10.21□□□□□ -0.78
ERCC8-202ENST00000381118 TMEM57Q8N5G2 664 aa10.21□□□□□ -0.78
ERCC8-202ENST00000381118 TOGARAM1Q9Y4F4 1720 aa10.2□□□□□ -0.78
ERCC8-202ENST00000381118 SPATA31A6Q5VVP1 1343 aa10.2□□□□□ -0.78
ERCC8-202ENST00000381118 MVPQ14764 893 aaKnown RBP10.2□□□□□ -0.78
ERCC8-202ENST00000381118 HDGFL1Q5TGJ6 251 aa10.2□□□□□ -0.78
ERCC8-202ENST00000381118 MEX3CQ5U5Q3 659 aaKnown RBP10.2□□□□□ -0.78
ERCC8-202ENST00000381118 STK31Q9BXU1 1019 aa10.2□□□□□ -0.78
ERCC8-202ENST00000381118 DISP2A7MBM2 1401 aa10.2□□□□□ -0.78
ERCC8-202ENST00000381118 PRAMEF22A3QJZ6 481 aa10.19□□□□□ -0.78
ERCC8-202ENST00000381118 MS4A1P11836 297 aa10.19□□□□□ -0.78
ERCC8-202ENST00000381118 CCDC30Q5VVM6 783 aa10.19□□□□□ -0.78
ERCC8-202ENST00000381118 ZNF790Q6PG37 636 aa10.19□□□□□ -0.78
ERCC8-202ENST00000381118 MRC1P22897 1456 aa10.19□□□□□ -0.78
ERCC8-202ENST00000381118 C5P01031 1676 aa10.19□□□□□ -0.78
ERCC8-202ENST00000381118 ITGB4P16144 1822 aa10.19□□□□□ -0.78
ERCC8-202ENST00000381118 EXOC5O00471 708 aa10.19□□□□□ -0.78
ERCC8-202ENST00000381118 G2E3Q7L622 706 aa10.19□□□□□ -0.78
ERCC8-202ENST00000381118 UNC5CLQ8IV45 518 aa10.19□□□□□ -0.78
ERCC8-202ENST00000381118 TTC5Q8N0Z6 440 aa10.19□□□□□ -0.78
ERCC8-202ENST00000381118 SPATA31A5Q5VU36 1347 aa10.18□□□□□ -0.78
ERCC8-202ENST00000381118 SPATA31A7Q8IWB4 1347 aa10.18□□□□□ -0.78
ERCC8-202ENST00000381118 BCL9LQ86UU0 1499 aa10.18□□□□□ -0.78
ERCC8-202ENST00000381118 ARHGAP45Q92619 1136 aa10.18□□□□□ -0.78
ERCC8-202ENST00000381118 USP21Q9UK80 565 aa10.18□□□□□ -0.78
ERCC8-202ENST00000381118 GIGYF1O75420 1035 aaPredicted RBP10.17□□□□□ -0.78
ERCC8-202ENST00000381118 ANXA1P04083 346 aa10.17□□□□□ -0.78
ERCC8-202ENST00000381118 NKX1-1Q15270 411 aaPredicted RBP10.17□□□□□ -0.78
ERCC8-202ENST00000381118 DDB1Q16531 1140 aa10.17□□□□□ -0.78
ERCC8-202ENST00000381118 CHPF2Q9P2E5 772 aa10.17□□□□□ -0.78
ERCC8-202ENST00000381118 DDX19BQ9UMR2 479 aa10.17□□□□□ -0.78
ERCC8-202ENST00000381118 THRAP3Q9Y2W1 955 aaKnown RBP10.17□□□□□ -0.78
ERCC8-202ENST00000381118 TNS2Q63HR2 1409 aa10.17□□□□□ -0.78
ERCC8-202ENST00000381118 A0A0G2JS52 829 aa10.17□□□□□ -0.78
ERCC8-202ENST00000381118 ERVV-2B6SEH9 535 aa10.17□□□□□ -0.78
ERCC8-202ENST00000381118 MYT1Q01538 1121 aa10.17□□□□□ -0.78
ERCC8-202ENST00000381118 FAM98CQ17RN3 349 aaKnown RBP10.17□□□□□ -0.78
ERCC8-202ENST00000381118 ZNF496Q96IT1 587 aaPredicted RBP10.17□□□□□ -0.78
ERCC8-202ENST00000381118 API5Q9BZZ5 524 aaKnown RBP10.17□□□□□ -0.78
ERCC8-202ENST00000381118 DOT1LQ8TEK3 1739 aa10.16□□□□□ -0.78
ERCC8-202ENST00000381118 F6X3S4 739 aa10.16□□□□□ -0.78
ERCC8-202ENST00000381118 FLIIQ13045 1269 aa10.16□□□□□ -0.78
ERCC8-202ENST00000381118 FKBP5Q13451 457 aaPredicted RBP10.16□□□□□ -0.78
ERCC8-202ENST00000381118 SYTL4Q96C24 671 aaPredicted RBP10.16□□□□□ -0.78
ERCC8-202ENST00000381118 PHAXQ9H814 394 aaKnown RBP10.16□□□□□ -0.78
ERCC8-202ENST00000381118 ABCC4O15439 1325 aa10.16□□□□□ -0.78
ERCC8-202ENST00000381118 PTPRCP08575 1304 aa10.16□□□□□ -0.78
ERCC8-202ENST00000381118 SOS1Q07889 1333 aaPredicted RBP10.16□□□□□ -0.78
ERCC8-202ENST00000381118 RGS12O14924 1447 aa10.16□□□□□ -0.78
ERCC8-202ENST00000381118 HOXB7P09629 217 aa10.15□□□□□ -0.78
ERCC8-202ENST00000381118 SLC4A10Q6U841 1118 aa10.15□□□□□ -0.78
ERCC8-202ENST00000381118 PELP1Q8IZL8 1130 aaKnown RBP10.15□□□□□ -0.78
ERCC8-202ENST00000381118 FNBP4Q8N3X1 1017 aaPredicted RBP10.15□□□□□ -0.78
ERCC8-202ENST00000381118 TMOD3Q9NYL9 352 aa10.15□□□□□ -0.78
ERCC8-202ENST00000381118 UBR2Q8IWV8 1755 aa10.15□□□□□ -0.78
ERCC8-202ENST00000381118 HEG1Q9ULI3 1381 aa10.15□□□□□ -0.78
ERCC8-202ENST00000381118 CDCA7Q9BWT1 371 aaPredicted RBP10.15□□□□□ -0.78
ERCC8-202ENST00000381118 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.15□□□□□ -0.78
ERCC8-202ENST00000381118 PAPPAQ13219 1627 aa10.14□□□□□ -0.79
ERCC8-202ENST00000381118 PTCD1O75127 700 aaKnown RBP10.14□□□□□ -0.79
ERCC8-202ENST00000381118 VPS72Q15906 364 aa10.14□□□□□ -0.79
ERCC8-202ENST00000381118 FMNL2Q96PY5 1086 aa10.14□□□□□ -0.79
ERCC8-202ENST00000381118 PCDHB15Q9Y5E8 787 aa10.14□□□□□ -0.79
ERCC8-202ENST00000381118 PIP4K2AP48426 406 aaPredicted RBP10.14□□□□□ -0.79
ERCC8-202ENST00000381118 PROSER3Q2NL68 480 aa10.14□□□□□ -0.79
ERCC8-202ENST00000381118 BARGINQ6ZT62 677 aa10.14□□□□□ -0.79
ERCC8-202ENST00000381118 AFF2P51816 1311 aa10.13□□□□□ -0.79
ERCC8-202ENST00000381118 PIGBQ92521 554 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 246 ms