RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 MYOM3Q5VTT5 1437 aa14.4□□□□□ -0.1
TPR-201ENST00000367478 TTC21AQ8NDW8 1320 aa14.4□□□□□ -0.1
TPR-201ENST00000367478 KDM4AO75164 1064 aa14.4□□□□□ -0.1
TPR-201ENST00000367478 URI1O94763 535 aaPredicted RBP14.4□□□□□ -0.1
TPR-201ENST00000367478 HLTFQ14527 1009 aaKnown RBP eCLIP14.4□□□□□ -0.17e-7■■□□□ 12.9
TPR-201ENST00000367478 TMEM266Q2M3C6 531 aa14.4□□□□□ -0.1
TPR-201ENST00000367478 SH2B1Q9NRF2 756 aaPredicted RBP14.4□□□□□ -0.1
TPR-201ENST00000367478 CKAP4Q07065 602 aaKnown RBP14.4□□□□□ -0.1
TPR-201ENST00000367478 DYNC1I1O14576 645 aa14.4□□□□□ -0.1
TPR-201ENST00000367478 GPATCH11Q8N954 259 aa14.4□□□□□ -0.1
TPR-201ENST00000367478 NUP88Q99567 741 aaPredicted RBP14.39□□□□□ -0.11
TPR-201ENST00000367478 ACTN2P35609 894 aa14.39□□□□□ -0.11
TPR-201ENST00000367478 TWISTNBQ3B726 338 aaPredicted RBP14.39□□□□□ -0.11
TPR-201ENST00000367478 CTNNBL1Q8WYA6 563 aaPredicted RBP14.39□□□□□ -0.11
TPR-201ENST00000367478 NLRP2Q9NX02 1062 aa14.39□□□□□ -0.11
TPR-201ENST00000367478 STXBP4Q6ZWJ1 553 aa14.39□□□□□ -0.11
TPR-201ENST00000367478 EHMT1Q9H9B1 1298 aa14.39□□□□□ -0.11
TPR-201ENST00000367478 GOLIM4O00461 696 aa14.39□□□□□ -0.11
TPR-201ENST00000367478 PPP1R14CQ8TAE6 165 aa14.39□□□□□ -0.11
TPR-201ENST00000367478 RAB3IL1Q8TBN0 382 aa14.38□□□□□ -0.11
TPR-201ENST00000367478 AMPD3Q01432 767 aa14.38□□□□□ -0.11
TPR-201ENST00000367478 PIBF1Q8WXW3 757 aa14.38□□□□□ -0.11
TPR-201ENST00000367478 HSF2BPO75031 334 aa14.38□□□□□ -0.11
TPR-201ENST00000367478 KANK3Q6NY19 840 aa14.38□□□□□ -0.11
TPR-201ENST00000367478 CHD1LQ86WJ1 897 aa14.38□□□□□ -0.11
TPR-201ENST00000367478 BACH2Q9BYV9 841 aa14.38□□□□□ -0.11
TPR-201ENST00000367478 NOL3O60936 208 aaKnown RBP14.38□□□□□ -0.11
TPR-201ENST00000367478 TTC14Q96N46 770 aa14.38□□□□□ -0.11
TPR-201ENST00000367478 TTC12Q9H892 705 aaPredicted RBP14.38□□□□□ -0.11
TPR-201ENST00000367478 WDR63Q8IWG1 891 aa14.37□□□□□ -0.11
TPR-201ENST00000367478 FERMT2Q96AC1 680 aa14.37□□□□□ -0.11
TPR-201ENST00000367478 PRIMPOLQ96LW4 560 aa14.37□□□□□ -0.11
TPR-201ENST00000367478 CLIP2Q9UDT6 1046 aa14.37□□□□□ -0.11
TPR-201ENST00000367478 POLA1P09884 1462 aaPredicted RBP14.37□□□□□ -0.11
TPR-201ENST00000367478 IPO4Q8TEX9 1081 aaKnown RBP14.37□□□□□ -0.11
TPR-201ENST00000367478 WDR66Q8TBY9 1149 aa14.37□□□□□ -0.11
TPR-201ENST00000367478 WDHD1O75717 1129 aaPredicted RBP14.37□□□□□ -0.11
TPR-201ENST00000367478 JAKMIP1Q96N16 626 aaKnown RBP14.37□□□□□ -0.11
TPR-201ENST00000367478 SYCE3A1L190 88 aa14.37□□□□□ -0.11
TPR-201ENST00000367478 KIF4AO95239 1232 aa14.37□□□□□ -0.11
TPR-201ENST00000367478 HDGFL1Q5TGJ6 251 aa14.37□□□□□ -0.11
TPR-201ENST00000367478 CCDC6Q16204 474 aa14.36□□□□□ -0.11
TPR-201ENST00000367478 NAP1L3Q99457 506 aaPredicted RBP14.36□□□□□ -0.11
TPR-201ENST00000367478 FHOD3Q2V2M9 1422 aa14.36□□□□□ -0.11
TPR-201ENST00000367478 PRPHP41219 470 aa14.36□□□□□ -0.11
TPR-201ENST00000367478 TNNT1P13805 278 aa14.36□□□□□ -0.11
TPR-201ENST00000367478 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.36□□□□□ -0.11
TPR-201ENST00000367478 A0A087WZG4 1122 aa14.35□□□□□ -0.11
TPR-201ENST00000367478 CBX1P83916 185 aa14.35□□□□□ -0.11
TPR-201ENST00000367478 TUBB4AP04350 444 aa14.35□□□□□ -0.11
TPR-201ENST00000367478 GTF2A1P52655 376 aaPredicted RBP14.35□□□□□ -0.11
TPR-201ENST00000367478 FKBP4Q02790 459 aaKnown RBP eCLIP14.35□□□□□ -0.11
TPR-201ENST00000367478 NOB1Q9ULX3 412 aaKnown RBP14.35□□□□□ -0.11
TPR-201ENST00000367478 A0A1W2PRG0 241 aa14.35□□□□□ -0.11
TPR-201ENST00000367478 RAB11FIP3O75154 756 aa14.35□□□□□ -0.11
TPR-201ENST00000367478 IQCGQ9H095 443 aaKnown RBP14.35□□□□□ -0.11
TPR-201ENST00000367478 CASTP20810 708 aaKnown RBP14.35□□□□□ -0.11
TPR-201ENST00000367478 LRRC27Q9C0I9 530 aa14.35□□□□□ -0.11
TPR-201ENST00000367478 ANAPC4Q9UJX5 808 aa14.35□□□□□ -0.11
TPR-201ENST00000367478 ATF7IPQ6VMQ6 1270 aa14.35□□□□□ -0.11
TPR-201ENST00000367478 KLHL34Q8N239 644 aa14.34□□□□□ -0.11
TPR-201ENST00000367478 TMOD2Q9NZR1 351 aa14.34□□□□□ -0.11
TPR-201ENST00000367478 AKAP2Q9Y2D5 859 aa14.34□□□□□ -0.11
TPR-201ENST00000367478 TCP11L2Q8N4U5 519 aa14.34□□□□□ -0.11
TPR-201ENST00000367478 CEP126Q9P2H0 1117 aa14.34□□□□□ -0.11
TPR-201ENST00000367478 RASAL2Q9UJF2 1139 aa14.34□□□□□ -0.11
TPR-201ENST00000367478 STX1AQ16623 288 aa14.34□□□□□ -0.11
TPR-201ENST00000367478 MKRN1Q9UHC7 482 aaKnown RBP14.34□□□□□ -0.11
TPR-201ENST00000367478 AACSQ86V21 672 aa14.34□□□□□ -0.11
TPR-201ENST00000367478 DDX19AQ9NUU7 478 aaKnown RBP14.34□□□□□ -0.11
TPR-201ENST00000367478 KIAA0753Q2KHM9 967 aa14.34□□□□□ -0.11
TPR-201ENST00000367478 SMC6Q96SB8 1091 aa14.34□□□□□ -0.11
TPR-201ENST00000367478 MVPQ14764 893 aaKnown RBP14.34□□□□□ -0.11
TPR-201ENST00000367478 MACROD2A1Z1Q3 448 aa14.33□□□□□ -0.11
TPR-201ENST00000367478 MTHFSP49914 203 aa14.33□□□□□ -0.11
TPR-201ENST00000367478 TDRD12Q587J7 1177 aaKnown RBP14.33□□□□□ -0.12
TPR-201ENST00000367478 RBM5P52756 815 aaKnown RBP eCLIP14.33□□□□□ -0.122e-8■□□□□ 8.1
TPR-201ENST00000367478 MAATS1Q7Z4T9 603 aa14.33□□□□□ -0.12
TPR-201ENST00000367478 SELENOOQ9BVL4 669 aa14.33□□□□□ -0.12
TPR-201ENST00000367478 ARFGAP3Q9NP61 516 aa14.33□□□□□ -0.12
TPR-201ENST00000367478 CCDC12Q8WUD4 166 aaPredicted RBP14.33□□□□□ -0.12
TPR-201ENST00000367478 CCDC171Q6TFL3 1326 aa14.33□□□□□ -0.12
TPR-201ENST00000367478 CEP83Q9Y592 693 aa14.33□□□□□ -0.12
TPR-201ENST00000367478 TATP17735 454 aaPredicted RBP14.33□□□□□ -0.12
TPR-201ENST00000367478 AIDAQ96BJ3 306 aa14.33□□□□□ -0.12
TPR-201ENST00000367478 LRP2BPQ9P2M1 347 aa14.33□□□□□ -0.12
TPR-201ENST00000367478 SLC4A2P04920 1241 aa14.33□□□□□ -0.12
TPR-201ENST00000367478 PPM1FP49593 454 aaPredicted RBP14.33□□□□□ -0.12
TPR-201ENST00000367478 CCDC110Q8TBZ0 833 aa14.33□□□□□ -0.12
TPR-201ENST00000367478 DRC1Q96MC2 740 aa14.33□□□□□ -0.12
TPR-201ENST00000367478 CCDC88BA6NC98 1476 aa14.33□□□□□ -0.12
TPR-201ENST00000367478 KIF3CO14782 793 aa14.32□□□□□ -0.12
TPR-201ENST00000367478 MSL1Q68DK7 614 aa14.32□□□□□ -0.12
TPR-201ENST00000367478 CUL5Q93034 780 aa14.32□□□□□ -0.12
TPR-201ENST00000367478 LMAN1P49257 510 aa14.32□□□□□ -0.12
TPR-201ENST00000367478 NBPF1Q3BBV0 1214 aa14.32□□□□□ -0.12
TPR-201ENST00000367478 KRT222Q8N1A0 295 aa14.32□□□□□ -0.12
TPR-201ENST00000367478 SLU7O95391 586 aaKnown RBP14.32□□□□□ -0.12
TPR-201ENST00000367478 CCDC77Q9BR77 488 aa14.32□□□□□ -0.12
TPR-201ENST00000367478 SNW1Q13573 536 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms