RNA–Protein interactions for RNA: ENST00000362944.1

RNU6-1260P-201, Transcript of RNA, U6 small nuclear 1260, pseudogene, humanhuman

BASIC

Gene RNU6-1260P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1260P-201ENST00000362944 BNIP3LO60238 219 aa2.16□□□□□ -2.06
RNU6-1260P-201ENST00000362944 GIGYF1O75420 1035 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1260P-201ENST00000362944 FGFR3P22607 806 aa2.16□□□□□ -2.06
RNU6-1260P-201ENST00000362944 GPC1P35052 558 aa2.16□□□□□ -2.06
RNU6-1260P-201ENST00000362944 SCTRP47872 440 aa2.16□□□□□ -2.06
RNU6-1260P-201ENST00000362944 LCE1DQ5T752 114 aa2.16□□□□□ -2.06
RNU6-1260P-201ENST00000362944 SLCO4C1Q6ZQN7 724 aa2.16□□□□□ -2.06
RNU6-1260P-201ENST00000362944 CHSY3Q70JA7 882 aa2.16□□□□□ -2.06
RNU6-1260P-201ENST00000362944 TAS1R3Q7RTX0 852 aa2.16□□□□□ -2.06
RNU6-1260P-201ENST00000362944 PLVAPQ9BX97 442 aa2.16□□□□□ -2.06
RNU6-1260P-201ENST00000362944 ARHGEF10LQ9HCE6 1279 aa2.16□□□□□ -2.06
RNU6-1260P-201ENST00000362944 NOP53Q9NZM5 478 aaKnown RBP2.16□□□□□ -2.06
RNU6-1260P-201ENST00000362944 KDM2AQ9Y2K7 1162 aa2.16□□□□□ -2.06
RNU6-1260P-201ENST00000362944 SPATA31C2B4DYI2 1134 aa2.15□□□□□ -2.07
RNU6-1260P-201ENST00000362944 FAM229AH3BQW9 127 aa2.15□□□□□ -2.07
RNU6-1260P-201ENST00000362944 HYAL3O43820 417 aaPredicted RBP2.15□□□□□ -2.07
RNU6-1260P-201ENST00000362944 COBLO75128 1261 aa2.15□□□□□ -2.07
RNU6-1260P-201ENST00000362944 ZMYND10O75800 440 aa2.15□□□□□ -2.07
RNU6-1260P-201ENST00000362944 CLN3Q13286 438 aa2.15□□□□□ -2.07
RNU6-1260P-201ENST00000362944 BARGINQ6ZT62 677 aa2.15□□□□□ -2.07
RNU6-1260P-201ENST00000362944 FCHSD1Q86WN1 690 aa2.15□□□□□ -2.07
RNU6-1260P-201ENST00000362944 HMX1Q9NP08 348 aaPredicted RBP2.15□□□□□ -2.07
RNU6-1260P-201ENST00000362944 KLF15Q9UIH9 416 aa2.15□□□□□ -2.07
RNU6-1260P-201ENST00000362944 HCN2Q9UL51 889 aa2.15□□□□□ -2.07
RNU6-1260P-201ENST00000362944 PHF24Q9UPV7 400 aa2.15□□□□□ -2.07
RNU6-1260P-201ENST00000362944 ARID1BQ8NFD5 2236 aaPredicted RBP2.14□□□□□ -2.07
RNU6-1260P-201ENST00000362944 PIK3R2O00459 728 aa2.14□□□□□ -2.07
RNU6-1260P-201ENST00000362944 TRIM66O15016 1216 aa2.14□□□□□ -2.07
RNU6-1260P-201ENST00000362944 SPATA31C1P0DKV0 1188 aa2.14□□□□□ -2.07
RNU6-1260P-201ENST00000362944 CLK2P49760 499 aaKnown RBP2.14□□□□□ -2.07
RNU6-1260P-201ENST00000362944 TUSC1Q2TAM9 212 aa2.14□□□□□ -2.07
RNU6-1260P-201ENST00000362944 WDR44Q5JSH3 913 aa2.14□□□□□ -2.07
RNU6-1260P-201ENST00000362944 DHX30Q7L2E3 1194 aaKnown RBP eCLIP2.14□□□□□ -2.07
RNU6-1260P-201ENST00000362944 NDFIP2Q9NV92 336 aa2.14□□□□□ -2.07
RNU6-1260P-201ENST00000362944 ATXN7L1Q9ULK2 861 aaPredicted RBP2.14□□□□□ -2.07
RNU6-1260P-201ENST00000362944 A0A1B0GTH6 734 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 STAU1O95793 577 aaKnown RBP2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 IL2RAP01589 272 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 CSB-PGBD3P0DP91 1061 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 ARAFP10398 606 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 CD33P20138 364 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 MSX1P28360 303 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 PCBP4P57723 403 aaKnown RBP2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 ERVK-9P63128 1117 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 CENPCQ03188 943 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 LRP8Q14114 963 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 GRIK4Q16099 956 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 PPP2R2DQ66LE6 453 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 CC2D2BQ6DHV5 1058 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 MCTP1Q6DN14 999 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 SEPT12Q8IYM1 358 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 PGBD3Q8N328 593 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 ZC3H15Q8WU90 426 aaKnown RBP2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 CNKSR1Q969H4 720 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 OSBPL3Q9H4L5 887 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 GPSM3Q9Y4H4 160 aa2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 ZC3H4Q9UPT8 1303 aaKnown RBP2.13□□□□□ -2.07
RNU6-1260P-201ENST00000362944 DCDC2BA2VCK2 349 aa2.12□□□□□ -2.07
RNU6-1260P-201ENST00000362944 AP1G2O75843 785 aa2.12□□□□□ -2.07
RNU6-1260P-201ENST00000362944 C4orf17Q53FE4 359 aa2.12□□□□□ -2.07
RNU6-1260P-201ENST00000362944 EFHC2Q5JST6 749 aa2.12□□□□□ -2.07
RNU6-1260P-201ENST00000362944 TMEM214Q6NUQ4 689 aaKnown RBP2.12□□□□□ -2.07
RNU6-1260P-201ENST00000362944 C8orf86Q6ZUL3 223 aa2.12□□□□□ -2.07
RNU6-1260P-201ENST00000362944 CYP2U1Q7Z449 544 aa2.12□□□□□ -2.07
RNU6-1260P-201ENST00000362944 PROCA1Q8NCQ7 364 aaPredicted RBP2.12□□□□□ -2.07
RNU6-1260P-201ENST00000362944 PCDHB9Q9Y5E1 797 aa2.12□□□□□ -2.07
RNU6-1260P-201ENST00000362944 PCDHB11Q9Y5F2 797 aa2.12□□□□□ -2.07
RNU6-1260P-201ENST00000362944 TRAK2O60296 914 aa2.11□□□□□ -2.07
RNU6-1260P-201ENST00000362944 APBA3O96018 575 aa2.11□□□□□ -2.07
RNU6-1260P-201ENST00000362944 ADH6P28332 368 aa2.11□□□□□ -2.07
RNU6-1260P-201ENST00000362944 PLCB2Q00722 1185 aa2.11□□□□□ -2.07
RNU6-1260P-201ENST00000362944 PRRT3Q5FWE3 981 aa2.11□□□□□ -2.07
RNU6-1260P-201ENST00000362944 ZSCAN10Q96SZ4 725 aaPredicted RBP2.11□□□□□ -2.07
RNU6-1260P-201ENST00000362944 ESYT1Q9BSJ8 1104 aa2.11□□□□□ -2.07
RNU6-1260P-201ENST00000362944 KRTAP4-9Q9BYQ8 210 aa2.11□□□□□ -2.07
RNU6-1260P-201ENST00000362944 KRTAP4-2Q9BYR5 136 aa2.11□□□□□ -2.07
RNU6-1260P-201ENST00000362944 ZCCHC2Q9C0B9 1178 aaKnown RBP2.11□□□□□ -2.07
RNU6-1260P-201ENST00000362944 FHDC1Q9C0D6 1143 aaPredicted RBP2.11□□□□□ -2.07
RNU6-1260P-201ENST00000362944 DNAAF2Q9NVR5 837 aaKnown RBP2.11□□□□□ -2.07
RNU6-1260P-201ENST00000362944 HRH3Q9Y5N1 445 aa2.11□□□□□ -2.07
RNU6-1260P-201ENST00000362944 KHNYNO15037 678 aaKnown RBP2.1□□□□□ -2.07
RNU6-1260P-201ENST00000362944 ATXN7O15265 892 aaPredicted RBP2.1□□□□□ -2.07
RNU6-1260P-201ENST00000362944 FBXO45P0C2W1 286 aa2.1□□□□□ -2.07
RNU6-1260P-201ENST00000362944 MAPTP10636 758 aaKnown RBP2.1□□□□□ -2.07
RNU6-1260P-201ENST00000362944 ATP4AP20648 1035 aa2.1□□□□□ -2.07
RNU6-1260P-201ENST00000362944 PLA2G4AP47712 749 aa2.1□□□□□ -2.07
RNU6-1260P-201ENST00000362944 HAP1P54257 671 aaPredicted RBP2.1□□□□□ -2.07
RNU6-1260P-201ENST00000362944 COL9A3Q14050 684 aaPredicted RBP2.1□□□□□ -2.07
RNU6-1260P-201ENST00000362944 LBRQ14739 615 aaKnown RBP2.1□□□□□ -2.07
RNU6-1260P-201ENST00000362944 GNASQ5JWF2 1037 aa2.1□□□□□ -2.07
RNU6-1260P-201ENST00000362944 SHISA2Q6UWI4 295 aa2.1□□□□□ -2.07
RNU6-1260P-201ENST00000362944 CDCA7Q9BWT1 371 aaPredicted RBP2.1□□□□□ -2.07
RNU6-1260P-201ENST00000362944 CRISPLD1Q9H336 500 aa2.1□□□□□ -2.07
RNU6-1260P-201ENST00000362944 STRN4Q9NRL3 753 aa2.1□□□□□ -2.07
RNU6-1260P-201ENST00000362944 ATP1B4Q9UN42 357 aaPredicted RBP2.1□□□□□ -2.07
RNU6-1260P-201ENST00000362944 PCDHGC4Q9Y5F7 938 aa2.1□□□□□ -2.07
RNU6-1260P-201ENST00000362944 M0R082 166 aa2.09□□□□□ -2.07
RNU6-1260P-201ENST00000362944 PAX4O43316 350 aa2.09□□□□□ -2.07
RNU6-1260P-201ENST00000362944 GNRH1P01148 92 aa2.09□□□□□ -2.07
RNU6-1260P-201ENST00000362944 USP17L8P0C7I0 530 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms