RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 PRDM11Q9NQV5 511 aa28.12■■■□□ 2.09
POLR2J2-202ENST00000358438 C1orf141Q5JVX7 400 aa28.11■■■□□ 2.09
POLR2J2-202ENST00000358438 ITPRIPQ8IWB1 547 aa28.11■■■□□ 2.09
POLR2J2-202ENST00000358438 TMEM57Q8N5G2 664 aa28.1■■■□□ 2.09
POLR2J2-202ENST00000358438 RAPGEF4Q8WZA2 1011 aa28.1■■■□□ 2.09
POLR2J2-202ENST00000358438 LGR6Q9HBX8 967 aa28.1■■■□□ 2.09
POLR2J2-202ENST00000358438 DDX19BQ9UMR2 479 aa28.1■■■□□ 2.09
POLR2J2-202ENST00000358438 SKAP1Q86WV1 359 aa28.07■■■□□ 2.08
POLR2J2-202ENST00000358438 OVOS2A0A0G2JMS6 1433 aa28.07■■■□□ 2.08
POLR2J2-202ENST00000358438 MPRIPQ6WCQ1 1025 aa28.06■■■□□ 2.08
POLR2J2-202ENST00000358438 MEGF6O75095 1541 aa28.06■■■□□ 2.08
POLR2J2-202ENST00000358438 PLEKHG2Q9H7P9 1386 aa28.06■■■□□ 2.08
POLR2J2-202ENST00000358438 IGHDP01880 384 aa28.05■■■□□ 2.08
POLR2J2-202ENST00000358438 TATP17735 454 aaPredicted RBP28.05■■■□□ 2.08
POLR2J2-202ENST00000358438 PCDHB15Q9Y5E8 787 aa28.05■■■□□ 2.08
POLR2J2-202ENST00000358438 AHDC1Q5TGY3 1603 aaPredicted RBP28.05■■■□□ 2.08
POLR2J2-202ENST00000358438 KDM3BQ7LBC6 1761 aa28.04■■■□□ 2.08
POLR2J2-202ENST00000358438 ABCC4O15439 1325 aa28.04■■■□□ 2.08
POLR2J2-202ENST00000358438 API5Q9BZZ5 524 aaKnown RBP28.04■■■□□ 2.08
POLR2J2-202ENST00000358438 RNMTO43148 476 aaKnown RBP28.03■■■□□ 2.08
POLR2J2-202ENST00000358438 TEFQ10587 303 aa28.03■■■□□ 2.08
POLR2J2-202ENST00000358438 ADAMTS7Q9UKP4 1686 aa28.03■■■□□ 2.08
POLR2J2-202ENST00000358438 COL5A2P05997 1499 aaPredicted RBP28.03■■■□□ 2.08
POLR2J2-202ENST00000358438 WDR17Q8IZU2 1322 aa28.03■■■□□ 2.08
POLR2J2-202ENST00000358438 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.03■■■□□ 2.08
POLR2J2-202ENST00000358438 SOS1Q07889 1333 aaPredicted RBP28.02■■■□□ 2.08
POLR2J2-202ENST00000358438 BECN1Q14457 450 aa28.02■■■□□ 2.08
POLR2J2-202ENST00000358438 SPG7Q9UQ90 795 aa28.01■■■□□ 2.07
POLR2J2-202ENST00000358438 PKD1L3Q7Z443 1732 aa28■■■□□ 2.07
POLR2J2-202ENST00000358438 SLC4A2P04920 1241 aa27.99■■■□□ 2.07
POLR2J2-202ENST00000358438 ZBTB40Q9NUA8 1239 aa27.99■■■□□ 2.07
POLR2J2-202ENST00000358438 SIPA1L3O60292 1781 aaPredicted RBP27.98■■■□□ 2.07
POLR2J2-202ENST00000358438 PHLPP1O60346 1717 aa27.98■■■□□ 2.07
POLR2J2-202ENST00000358438 PTPRCP08575 1304 aa27.98■■■□□ 2.07
POLR2J2-202ENST00000358438 RGS12O14924 1447 aa27.97■■■□□ 2.07
POLR2J2-202ENST00000358438 BTBD11A6QL63 1104 aa27.96■■■□□ 2.07
POLR2J2-202ENST00000358438 TOM1L2Q6ZVM7 507 aa27.96■■■□□ 2.07
POLR2J2-202ENST00000358438 SCN11AQ9UI33 1791 aa27.96■■■□□ 2.07
POLR2J2-202ENST00000358438 PKNOX2Q96KN3 472 aa27.96■■■□□ 2.07
POLR2J2-202ENST00000358438 RRAGDQ9NQL2 400 aaPredicted RBP27.96■■■□□ 2.07
POLR2J2-202ENST00000358438 COL22A1Q8NFW1 1626 aaPredicted RBP27.95■■■□□ 2.07
POLR2J2-202ENST00000358438 PHKG2P15735 406 aa27.95■■■□□ 2.07
POLR2J2-202ENST00000358438 CCDC30Q5VVM6 783 aa27.95■■■□□ 2.07
POLR2J2-202ENST00000358438 STK31Q9BXU1 1019 aa27.95■■■□□ 2.07
POLR2J2-202ENST00000358438 PARP4Q9UKK3 1724 aaKnown RBP27.95■■■□□ 2.06
POLR2J2-202ENST00000358438 EIF4A1P60842 406 aaKnown RBP27.95■■■□□ 2.06
POLR2J2-202ENST00000358438 CHMP4BQ9H444 224 aaKnown RBP27.95■■■□□ 2.06
POLR2J2-202ENST00000358438 RWDD1Q9H446 243 aaPredicted RBP27.95■■■□□ 2.06
POLR2J2-202ENST00000358438 CACNA1FO60840 1977 aa27.94■■■□□ 2.06
POLR2J2-202ENST00000358438 ZBTB7BO15156 539 aaPredicted RBP27.93■■■□□ 2.06
POLR2J2-202ENST00000358438 IFNL2Q8IZJ0 200 aa27.93■■■□□ 2.06
POLR2J2-202ENST00000358438 KDM6AO15550 1401 aaPredicted RBP27.93■■■□□ 2.06
POLR2J2-202ENST00000358438 HSPA1LP34931 641 aa27.92■■■□□ 2.06
POLR2J2-202ENST00000358438 COL16A1Q07092 1604 aaPredicted RBP27.91■■■□□ 2.06
POLR2J2-202ENST00000358438 KCNQ3O43525 872 aa27.91■■■□□ 2.06
POLR2J2-202ENST00000358438 HOXB7P09629 217 aa27.9■■■□□ 2.06
POLR2J2-202ENST00000358438 INTS3Q68E01 1043 aaKnown RBP27.9■■■□□ 2.06
POLR2J2-202ENST00000358438 CARD10Q9BWT7 1032 aa27.9■■■□□ 2.06
POLR2J2-202ENST00000358438 STRN4Q9NRL3 753 aa27.9■■■□□ 2.06
POLR2J2-202ENST00000358438 CYP27B1O15528 508 aa27.9■■■□□ 2.06
POLR2J2-202ENST00000358438 G2E3Q7L622 706 aa27.9■■■□□ 2.06
POLR2J2-202ENST00000358438 EVA1CP58658 441 aa27.89■■■□□ 2.06
POLR2J2-202ENST00000358438 NECTIN2Q92692 538 aa27.89■■■□□ 2.06
POLR2J2-202ENST00000358438 HDAC1Q13547 482 aaPredicted RBP27.88■■■□□ 2.05
POLR2J2-202ENST00000358438 HDGFL1Q5TGJ6 251 aa27.88■■■□□ 2.05
POLR2J2-202ENST00000358438 LARP1Q6PKG0 1096 aaKnown RBP27.88■■■□□ 2.05
POLR2J2-202ENST00000358438 COL14A1Q05707 1796 aaKnown RBP27.88■■■□□ 2.05
POLR2J2-202ENST00000358438 CLCN1P35523 988 aa27.87■■■□□ 2.05
POLR2J2-202ENST00000358438 RGS3P49796 1198 aa27.87■■■□□ 2.05
POLR2J2-202ENST00000358438 DCAF5Q96JK2 942 aa27.87■■■□□ 2.05
POLR2J2-202ENST00000358438 SLC52A2Q9HAB3 445 aa27.87■■■□□ 2.05
POLR2J2-202ENST00000358438 RRP9O43818 475 aaKnown RBP27.85■■■□□ 2.05
POLR2J2-202ENST00000358438 CHMP4AQ9BY43 222 aa27.85■■■□□ 2.05
POLR2J2-202ENST00000358438 MRC1P22897 1456 aa27.85■■■□□ 2.05
POLR2J2-202ENST00000358438 HSP90AB1P08238 724 aaKnown RBP27.85■■■□□ 2.05
POLR2J2-202ENST00000358438 FLIIQ13045 1269 aa27.85■■■□□ 2.05
POLR2J2-202ENST00000358438 BTG4Q9NY30 223 aa27.84■■■□□ 2.05
POLR2J2-202ENST00000358438 HEG1Q9ULI3 1381 aa27.84■■■□□ 2.05
POLR2J2-202ENST00000358438 IL2RBP14784 551 aa27.83■■■□□ 2.05
POLR2J2-202ENST00000358438 ANTXR1Q9H6X2 564 aa27.83■■■□□ 2.05
POLR2J2-202ENST00000358438 FSD2A1L4K1 749 aa27.83■■■□□ 2.05
POLR2J2-202ENST00000358438 PCDH11XQ9BZA7 1347 aa27.83■■■□□ 2.04
POLR2J2-202ENST00000358438 PCDH11YQ9BZA8 1340 aa27.83■■■□□ 2.04
POLR2J2-202ENST00000358438 ZCRB1Q8TBF4 217 aaKnown RBP27.82■■■□□ 2.04
POLR2J2-202ENST00000358438 EIF2S2P20042 333 aaKnown RBP27.82■■■□□ 2.04
POLR2J2-202ENST00000358438 NFATC2IPQ8NCF5 419 aa27.82■■■□□ 2.04
POLR2J2-202ENST00000358438 GIGYF1O75420 1035 aaPredicted RBP27.8■■■□□ 2.04
POLR2J2-202ENST00000358438 FKBP5Q13451 457 aaPredicted RBP27.8■■■□□ 2.04
POLR2J2-202ENST00000358438 F6X3S4 739 aa27.8■■■□□ 2.04
POLR2J2-202ENST00000358438 C1orf115Q9H7X2 142 aa27.8■■■□□ 2.04
POLR2J2-202ENST00000358438 SHANK3Q9BYB0 1731 aa27.79■■■□□ 2.04
POLR2J2-202ENST00000358438 GOLGA6L3A6NEY3 463 aa27.79■■■□□ 2.04
POLR2J2-202ENST00000358438 ZNF790Q6PG37 636 aa27.79■■■□□ 2.04
POLR2J2-202ENST00000358438 FBXO41Q8TF61 875 aa27.79■■■□□ 2.04
POLR2J2-202ENST00000358438 NUTM2BA6NNL0 878 aaPredicted RBP27.78■■■□□ 2.04
POLR2J2-202ENST00000358438 NUTM2EB1AL46 878 aaPredicted RBP27.78■■■□□ 2.04
POLR2J2-202ENST00000358438 CCT4P50991 539 aaKnown RBP27.78■■■□□ 2.04
POLR2J2-202ENST00000358438 NUTM2AQ8IVF1 878 aaPredicted RBP27.78■■■□□ 2.04
POLR2J2-202ENST00000358438 SLC4A10Q6U841 1118 aa27.77■■■□□ 2.04
POLR2J2-202ENST00000358438 CHPF2Q9P2E5 772 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms