RNA–Protein interactions for RNA: ENST00000354452.7

TCF4-201, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,482 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-201ENST00000354452 SPG7Q9UQ90 795 aa21.12■□□□□ 0.97
TCF4-201ENST00000354452 CFAP65Q6ZU64 1925 aaKnown RBP21.12■□□□□ 0.97
TCF4-201ENST00000354452 SBNO2Q9Y2G9 1366 aa21.12■□□□□ 0.97
TCF4-201ENST00000354452 TPM3P06753 285 aa21.12■□□□□ 0.97
TCF4-201ENST00000354452 FAM173BQ6P4H8 233 aa21.12■□□□□ 0.97
TCF4-201ENST00000354452 MSH6P52701 1360 aa21.11■□□□□ 0.97
TCF4-201ENST00000354452 CHMLP26374 656 aa21.11■□□□□ 0.97
TCF4-201ENST00000354452 NME9Q86XW9 330 aa21.11■□□□□ 0.97
TCF4-201ENST00000354452 BICD2Q8TD16 824 aa21.11■□□□□ 0.97
TCF4-201ENST00000354452 CLTCL1P53675 1640 aa21.11■□□□□ 0.97
TCF4-201ENST00000354452 CASTP20810 708 aaKnown RBP21.11■□□□□ 0.97
TCF4-201ENST00000354452 PLCH2O75038 1416 aa21.11■□□□□ 0.97
TCF4-201ENST00000354452 PLCD3Q8N3E9 789 aa21.1■□□□□ 0.97
TCF4-201ENST00000354452 TFIP11Q9UBB9 837 aaKnown RBP21.1■□□□□ 0.97
TCF4-201ENST00000354452 CEP152O94986 1710 aa21.1■□□□□ 0.97
TCF4-201ENST00000354452 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.1■□□□□ 0.97
TCF4-201ENST00000354452 PDE4CQ08493 712 aa21.1■□□□□ 0.97
TCF4-201ENST00000354452 TRMT1Q9NXH9 659 aaKnown RBP21.1■□□□□ 0.97
TCF4-201ENST00000354452 TAOK2Q9UL54 1235 aa21.1■□□□□ 0.97
TCF4-201ENST00000354452 TRPM2O94759 1503 aa21.1■□□□□ 0.97
TCF4-201ENST00000354452 COG3Q96JB2 828 aa21.1■□□□□ 0.97
TCF4-201ENST00000354452 TNMDQ9H2S6 317 aa21.1■□□□□ 0.97
TCF4-201ENST00000354452 SURF6O75683 361 aaKnown RBP21.09■□□□□ 0.97
TCF4-201ENST00000354452 TSPYL4Q9UJ04 414 aa21.09■□□□□ 0.97
TCF4-201ENST00000354452 FILIP1Q7Z7B0 1213 aa21.09■□□□□ 0.97
TCF4-201ENST00000354452 NUP62CLQ9H1M0 184 aa21.09■□□□□ 0.97
TCF4-201ENST00000354452 GOLGA6L19H0YKK7 550 aa21.08■□□□□ 0.97
TCF4-201ENST00000354452 GJB2P29033 226 aa21.08■□□□□ 0.97
TCF4-201ENST00000354452 AEBP1Q8IUX7 1158 aa21.08■□□□□ 0.97
TCF4-201ENST00000354452 UNC5CLQ8IV45 518 aa21.08■□□□□ 0.97
TCF4-201ENST00000354452 CFAP74Q9C0B2 1584 aa21.08■□□□□ 0.97
TCF4-201ENST00000354452 F13A1P00488 732 aa21.08■□□□□ 0.96
TCF4-201ENST00000354452 CUL4AQ13619 759 aa21.08■□□□□ 0.96
TCF4-201ENST00000354452 MAP3K11Q16584 847 aa21.08■□□□□ 0.96
TCF4-201ENST00000354452 G2E3Q7L622 706 aa21.08■□□□□ 0.96
TCF4-201ENST00000354452 NECAB1Q8N987 351 aa21.08■□□□□ 0.96
TCF4-201ENST00000354452 NRBP1Q9UHY1 535 aa21.08■□□□□ 0.96
TCF4-201ENST00000354452 AK2P54819 239 aa21.08■□□□□ 0.96
TCF4-201ENST00000354452 CEBPZQ03701 1054 aaKnown RBP21.08■□□□□ 0.96
TCF4-201ENST00000354452 OGFRQ9NZT2 677 aa21.08■□□□□ 0.96
TCF4-201ENST00000354452 PREX2Q70Z35 1606 aa21.07■□□□□ 0.96
TCF4-201ENST00000354452 BRPF1P55201 1214 aaPredicted RBP21.07■□□□□ 0.96
TCF4-201ENST00000354452 WAPLQ7Z5K2 1190 aa21.07■□□□□ 0.96
TCF4-201ENST00000354452 FOSBP53539 338 aa21.07■□□□□ 0.96
TCF4-201ENST00000354452 LARP1BQ659C4 914 aaKnown RBP21.07■□□□□ 0.96
TCF4-201ENST00000354452 KCNF1Q9H3M0 494 aa21.06■□□□□ 0.96
TCF4-201ENST00000354452 LIMCH1Q9UPQ0 1083 aa21.06■□□□□ 0.96
TCF4-201ENST00000354452 JAKMIP1Q96N16 626 aaKnown RBP21.06■□□□□ 0.96
TCF4-201ENST00000354452 BECN2A8MW95 431 aa21.05■□□□□ 0.96
TCF4-201ENST00000354452 GTF2F1P35269 517 aaKnown RBP eCLIP21.05■□□□□ 0.96
TCF4-201ENST00000354452 STK3Q13188 491 aa21.05■□□□□ 0.96
TCF4-201ENST00000354452 ANO6Q4KMQ2 910 aa21.05■□□□□ 0.96
TCF4-201ENST00000354452 FEZ1Q99689 392 aa21.05■□□□□ 0.96
TCF4-201ENST00000354452 RTL1A6NKG5 1358 aa21.04■□□□□ 0.96
TCF4-201ENST00000354452 CLIP2Q9UDT6 1046 aa21.04■□□□□ 0.96
TCF4-201ENST00000354452 NAP1L2Q9ULW6 460 aaPredicted RBP21.04■□□□□ 0.96
TCF4-201ENST00000354452 SPTLC3Q9NUV7 552 aa21.04■□□□□ 0.96
TCF4-201ENST00000354452 CCDC66A2RUB6 948 aa21.03■□□□□ 0.96
TCF4-201ENST00000354452 ANAPC15P60006 121 aa21.03■□□□□ 0.96
TCF4-201ENST00000354452 AP5Z1O43299 807 aa21.03■□□□□ 0.96
TCF4-201ENST00000354452 KRT85P78386 507 aa21.03■□□□□ 0.96
TCF4-201ENST00000354452 FAM200AQ8TCP9 573 aa21.03■□□□□ 0.96
TCF4-201ENST00000354452 TCEANC2Q96MN5 208 aa21.03■□□□□ 0.96
TCF4-201ENST00000354452 LRRFIP2Q9Y608 721 aaKnown RBP21.03■□□□□ 0.96
TCF4-201ENST00000354452 SHPRHQ149N8 1683 aa21.03■□□□□ 0.96
TCF4-201ENST00000354452 PNMA6EA0A0J9YXQ4 647 aa21.03■□□□□ 0.96
TCF4-201ENST00000354452 NCBP1Q09161 790 aaKnown RBP21.03■□□□□ 0.96
TCF4-201ENST00000354452 GORABQ5T7V8 394 aa21.03■□□□□ 0.96
TCF4-201ENST00000354452 DACT1Q9NYF0 836 aa21.02■□□□□ 0.96
TCF4-201ENST00000354452 ADGRL1O94910 1474 aa21.02■□□□□ 0.96
TCF4-201ENST00000354452 TYRO3Q06418 890 aa21.02■□□□□ 0.96
TCF4-201ENST00000354452 PRPF40BQ6NWY9 871 aaKnown RBP21.02■□□□□ 0.95
TCF4-201ENST00000354452 PDRG1Q9NUG6 133 aa21.02■□□□□ 0.95
TCF4-201ENST00000354452 PTCH1Q13635 1447 aa21.01■□□□□ 0.95
TCF4-201ENST00000354452 CCT4P50991 539 aaKnown RBP21.01■□□□□ 0.95
TCF4-201ENST00000354452 CEP135Q66GS9 1140 aa21.01■□□□□ 0.95
TCF4-201ENST00000354452 UBTFL1P0CB47 393 aaPredicted RBP21■□□□□ 0.95
TCF4-201ENST00000354452 ZNF165P49910 485 aa21■□□□□ 0.95
TCF4-201ENST00000354452 IDI1Q13907 227 aa21■□□□□ 0.95
TCF4-201ENST00000354452 ZRSR1Q15695 479 aaKnown RBP21■□□□□ 0.95
TCF4-201ENST00000354452 TAF3Q5VWG9 929 aa21■□□□□ 0.95
TCF4-201ENST00000354452 DNAJC25Q9H1X3 360 aa21■□□□□ 0.95
TCF4-201ENST00000354452 GNAI3P08754 354 aa20.99■□□□□ 0.95
TCF4-201ENST00000354452 PTPN14Q15678 1187 aa20.99■□□□□ 0.95
TCF4-201ENST00000354452 SYTL4Q96C24 671 aaPredicted RBP20.99■□□□□ 0.95
TCF4-201ENST00000354452 SPATA32Q96LK8 384 aa20.99■□□□□ 0.95
TCF4-201ENST00000354452 TNNT3P45378 269 aaPredicted RBP20.99■□□□□ 0.95
TCF4-201ENST00000354452 ABCA6Q8N139 1617 aa20.99■□□□□ 0.95
TCF4-201ENST00000354452 SMTNL1A8MU46 457 aa20.99■□□□□ 0.95
TCF4-201ENST00000354452 KRT222Q8N1A0 295 aa20.99■□□□□ 0.95
TCF4-201ENST00000354452 ZNF853P0CG23 659 aa20.98■□□□□ 0.95
TCF4-201ENST00000354452 RASEFQ8IZ41 740 aa20.98■□□□□ 0.95
TCF4-201ENST00000354452 ZKSCAN1P17029 563 aaPredicted RBP20.98■□□□□ 0.95
TCF4-201ENST00000354452 LIG1P18858 919 aa20.98■□□□□ 0.95
TCF4-201ENST00000354452 SPHKAPQ2M3C7 1700 aa20.98■□□□□ 0.95
TCF4-201ENST00000354452 EIF2S2P20042 333 aaKnown RBP20.98■□□□□ 0.95
TCF4-201ENST00000354452 IL13P35225 146 aa20.98■□□□□ 0.95
TCF4-201ENST00000354452 CNTROBQ8N137 903 aa20.98■□□□□ 0.95
TCF4-201ENST00000354452 CYP46A1Q9Y6A2 500 aa20.98■□□□□ 0.95
TCF4-201ENST00000354452 CHMP4AQ9BY43 222 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms