RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 RRAGCQ9HB90 399 aa22.28■■□□□ 1.16
DDX55-202ENST00000354291 TMOD3Q9NYL9 352 aa22.28■■□□□ 1.16
DDX55-202ENST00000354291 FYB1O15117 783 aa22.27■■□□□ 1.16
DDX55-202ENST00000354291 WDR90Q96KV7 1748 aa22.27■■□□□ 1.16
DDX55-202ENST00000354291 CCDC87Q9NVE4 849 aa22.27■■□□□ 1.16
DDX55-202ENST00000354291 NKX1-1Q15270 411 aaPredicted RBP22.25■■□□□ 1.15
DDX55-202ENST00000354291 SPG7Q9UQ90 795 aa22.25■■□□□ 1.15
DDX55-202ENST00000354291 RTCBQ9Y3I0 505 aaKnown RBP22.25■■□□□ 1.15
DDX55-202ENST00000354291 KDM2BQ8NHM5 1336 aa22.25■■□□□ 1.15
DDX55-202ENST00000354291 INSRP06213 1382 aa22.25■■□□□ 1.15
DDX55-202ENST00000354291 N4BP2Q86UW6 1770 aaPredicted RBP22.24■■□□□ 1.15
DDX55-202ENST00000354291 PARP3Q9Y6F1 533 aa22.23■■□□□ 1.15
DDX55-202ENST00000354291 ITGB4P16144 1822 aa22.22■■□□□ 1.15
DDX55-202ENST00000354291 ARHGEF1Q92888 912 aaKnown RBP22.22■■□□□ 1.15
DDX55-202ENST00000354291 ATG3Q9NT62 314 aa22.22■■□□□ 1.15
DDX55-202ENST00000354291 RNF181Q9P0P0 153 aa22.22■■□□□ 1.15
DDX55-202ENST00000354291 KCNA3P22001 575 aa22.21■■□□□ 1.15
DDX55-202ENST00000354291 PIM2Q9P1W9 311 aa22.21■■□□□ 1.15
DDX55-202ENST00000354291 KCPQ6ZWJ8 1503 aa22.21■■□□□ 1.15
DDX55-202ENST00000354291 ST20-MTHFSA0A0A6YYL1 179 aa22.2■■□□□ 1.14
DDX55-202ENST00000354291 RFC4P35249 363 aa22.2■■□□□ 1.14
DDX55-202ENST00000354291 FLT4P35916 1363 aa22.2■■□□□ 1.14
DDX55-202ENST00000354291 PLEKHG2Q9H7P9 1386 aa22.2■■□□□ 1.14
DDX55-202ENST00000354291 C10orf71Q711Q0 1435 aa22.2■■□□□ 1.14
DDX55-202ENST00000354291 PPM1GO15355 546 aaPredicted RBP22.19■■□□□ 1.14
DDX55-202ENST00000354291 GYS1P13807 737 aa22.19■■□□□ 1.14
DDX55-202ENST00000354291 DALRD3Q5D0E6 543 aaKnown RBP22.19■■□□□ 1.14
DDX55-202ENST00000354291 SMC1BQ8NDV3 1235 aa22.19■■□□□ 1.14
DDX55-202ENST00000354291 TESK2Q96S53 571 aa22.19■■□□□ 1.14
DDX55-202ENST00000354291 RBM42Q9BTD8 480 aaKnown RBP22.19■■□□□ 1.14
DDX55-202ENST00000354291 HSPA1AP0DMV8 641 aaKnown RBP22.18■■□□□ 1.14
DDX55-202ENST00000354291 HSPA1BP0DMV9 641 aaKnown RBP22.18■■□□□ 1.14
DDX55-202ENST00000354291 EMILIN1Q9Y6C2 1016 aa22.17■■□□□ 1.14
DDX55-202ENST00000354291 MAP2P11137 1827 aaKnown RBP22.17■■□□□ 1.14
DDX55-202ENST00000354291 IFNL2Q8IZJ0 200 aa22.16■■□□□ 1.14
DDX55-202ENST00000354291 DCAF5Q96JK2 942 aa22.16■■□□□ 1.14
DDX55-202ENST00000354291 KIF13BQ9NQT8 1826 aa22.15■■□□□ 1.14
DDX55-202ENST00000354291 KIAA1551Q9HCM1 1747 aa22.15■■□□□ 1.14
DDX55-202ENST00000354291 ADRA2BP18089 450 aa22.15■■□□□ 1.14
DDX55-202ENST00000354291 PHKG2P15735 406 aa22.14■■□□□ 1.13
DDX55-202ENST00000354291 SLC4A9Q96Q91 983 aa22.14■■□□□ 1.13
DDX55-202ENST00000354291 SLC24A1O60721 1099 aa22.13■■□□□ 1.13
DDX55-202ENST00000354291 RPS6KA4O75676 772 aa22.13■■□□□ 1.13
DDX55-202ENST00000354291 RC3H1Q5TC82 1133 aaKnown RBP22.13■■□□□ 1.13
DDX55-202ENST00000354291 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.13■■□□□ 1.134e-6■□□□□ 9.3
DDX55-202ENST00000354291 KIF24Q5T7B8 1368 aa22.12■■□□□ 1.13
DDX55-202ENST00000354291 CHRNA5P30532 468 aa22.12■■□□□ 1.13
DDX55-202ENST00000354291 EYA1Q99502 592 aa22.12■■□□□ 1.13
DDX55-202ENST00000354291 SRP68Q9UHB9 627 aaKnown RBP22.09■■□□□ 1.13
DDX55-202ENST00000354291 C4AP0C0L4 1744 aa22.09■■□□□ 1.13
DDX55-202ENST00000354291 VEGFAP15692 232 aaPredicted RBP22.08■■□□□ 1.13
DDX55-202ENST00000354291 PKD1L3Q7Z443 1732 aa22.08■■□□□ 1.12
DDX55-202ENST00000354291 CNTNAP4Q9C0A0 1308 aa22.07■■□□□ 1.12
DDX55-202ENST00000354291 FKBP8Q14318 412 aa22.07■■□□□ 1.12
DDX55-202ENST00000354291 RASSF7Q02833 373 aa22.06■■□□□ 1.12
DDX55-202ENST00000354291 DDR1Q08345 913 aa22.06■■□□□ 1.12
DDX55-202ENST00000354291 KDRP35968 1356 aa22.06■■□□□ 1.12
DDX55-202ENST00000354291 TONSLQ96HA7 1378 aa22.05■■□□□ 1.12
DDX55-202ENST00000354291 ERVV-2B6SEH9 535 aa22.05■■□□□ 1.12
DDX55-202ENST00000354291 GLTPD2A6NH11 291 aa22.04■■□□□ 1.12
DDX55-202ENST00000354291 PTCD1O75127 700 aaKnown RBP22.04■■□□□ 1.12
DDX55-202ENST00000354291 BRCA1P38398 1863 aaKnown RBP22.04■■□□□ 1.12
DDX55-202ENST00000354291 WASHC2AQ641Q2 1341 aa22.04■■□□□ 1.12
DDX55-202ENST00000354291 ARFGEF1Q9Y6D6 1849 aa22.03■■□□□ 1.12
DDX55-202ENST00000354291 NCAPD2Q15021 1401 aa22.03■■□□□ 1.12
DDX55-202ENST00000354291 LMNB1P20700 586 aa22.02■■□□□ 1.12
DDX55-202ENST00000354291 CABP4P57796 275 aa22.02■■□□□ 1.12
DDX55-202ENST00000354291 CARD14Q9BXL6 1004 aa22.02■■□□□ 1.12
DDX55-202ENST00000354291 CRKLP46109 303 aaKnown RBP22.01■■□□□ 1.11
DDX55-202ENST00000354291 USP42Q9H9J4 1324 aaKnown RBP22■■□□□ 1.11
DDX55-202ENST00000354291 ZC3H4Q9UPT8 1303 aaKnown RBP22■■□□□ 1.11
DDX55-202ENST00000354291 TNRC6CQ9HCJ0 1690 aaKnown RBP21.99■■□□□ 1.11
DDX55-202ENST00000354291 POLRMTO00411 1230 aaKnown RBP21.99■■□□□ 1.11
DDX55-202ENST00000354291 HSP90AB1P08238 724 aaKnown RBP21.99■■□□□ 1.11
DDX55-202ENST00000354291 TM4SF1P30408 202 aa21.98■■□□□ 1.11
DDX55-202ENST00000354291 MKRN1Q9UHC7 482 aaKnown RBP21.98■■□□□ 1.11
DDX55-202ENST00000354291 SBF1O95248 1867 aa21.98■■□□□ 1.11
DDX55-202ENST00000354291 TRIM26Q12899 539 aaPredicted RBP21.97■■□□□ 1.11
DDX55-202ENST00000354291 ZPR1O75312 459 aa21.96■■□□□ 1.11
DDX55-202ENST00000354291 EIF4A2Q14240 407 aaKnown RBP21.96■■□□□ 1.11
DDX55-202ENST00000354291 PLEKHO1Q53GL0 409 aaPredicted RBP21.96■■□□□ 1.11
DDX55-202ENST00000354291 POLKQ9UBT6 870 aa21.96■■□□□ 1.11
DDX55-202ENST00000354291 MYH14Q7Z406 1995 aaKnown RBP21.96■■□□□ 1.11
DDX55-202ENST00000354291 CDCA8Q53HL2 280 aa21.95■■□□□ 1.1
DDX55-202ENST00000354291 USPL1Q5W0Q7 1092 aa21.95■■□□□ 1.1
DDX55-202ENST00000354291 ZNF530Q6P9A1 599 aaPredicted RBP21.95■■□□□ 1.1
DDX55-202ENST00000354291 POTECB2RU33 542 aa21.94■■□□□ 1.1
DDX55-202ENST00000354291 TNNT2P45379 298 aaPredicted RBP21.94■■□□□ 1.1
DDX55-202ENST00000354291 MTHFSP49914 203 aa21.94■■□□□ 1.1
DDX55-202ENST00000354291 DPY19L2Q6NUT2 758 aa21.94■■□□□ 1.1
DDX55-202ENST00000354291 TTLL6Q8N841 843 aa21.94■■□□□ 1.1
DDX55-202ENST00000354291 NFATC2IPQ8NCF5 419 aa21.94■■□□□ 1.1
DDX55-202ENST00000354291 KIF20BQ96Q89 1820 aa21.94■■□□□ 1.1
DDX55-202ENST00000354291 KDM6AO15550 1401 aaPredicted RBP21.92■■□□□ 1.1
DDX55-202ENST00000354291 FOXN1O15353 648 aa21.92■■□□□ 1.1
DDX55-202ENST00000354291 INTS5Q6P9B9 1019 aaKnown RBP21.92■■□□□ 1.1
DDX55-202ENST00000354291 CREBZFQ9NS37 354 aa21.91■■□□□ 1.1
DDX55-202ENST00000354291 COL5A3P25940 1745 aaPredicted RBP21.91■■□□□ 1.1
DDX55-202ENST00000354291 SLC34A2O95436 690 aa21.9■■□□□ 1.1
DDX55-202ENST00000354291 NFIXQ14938 502 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms