RNA–Protein interactions for RNA: ENST00000353632.6

NPHS1-201, Transcript of NPHS1, nephrin, humanhuman

TSL 5 BASIC

Gene NPHS1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-201ENST00000353632 GPT2Q8TD30 523 aa13.72□□□□□ -0.21
NPHS1-201ENST00000353632 WDR33Q9C0J8 1336 aaKnown RBP13.72□□□□□ -0.21
NPHS1-201ENST00000353632 PPIP5K1Q6PFW1 1433 aa13.72□□□□□ -0.21
NPHS1-201ENST00000353632 CKAP2LQ8IYA6 745 aa13.72□□□□□ -0.21
NPHS1-201ENST00000353632 WASLO00401 505 aaPredicted RBP13.72□□□□□ -0.21
NPHS1-201ENST00000353632 U2AF2P26368 475 aaKnown RBP eCLIP13.72□□□□□ -0.21
NPHS1-201ENST00000353632 TFIP11Q9UBB9 837 aaKnown RBP13.72□□□□□ -0.21
NPHS1-201ENST00000353632 CD109Q6YHK3 1445 aa13.71□□□□□ -0.21
NPHS1-201ENST00000353632 MCM5P33992 734 aa13.71□□□□□ -0.21
NPHS1-201ENST00000353632 FLIIQ13045 1269 aa13.71□□□□□ -0.21
NPHS1-201ENST00000353632 PRPF40BQ6NWY9 871 aaKnown RBP13.71□□□□□ -0.21
NPHS1-201ENST00000353632 NSD2O96028 1365 aa13.71□□□□□ -0.21
NPHS1-201ENST00000353632 ZNF500O60304 480 aaPredicted RBP13.71□□□□□ -0.21
NPHS1-201ENST00000353632 USP48Q86UV5 1035 aa13.71□□□□□ -0.21
NPHS1-201ENST00000353632 CLASRPQ8N2M8 674 aaKnown RBP13.71□□□□□ -0.21
NPHS1-201ENST00000353632 NECAB1Q8N987 351 aa13.71□□□□□ -0.21
NPHS1-201ENST00000353632 ARHGAP45Q92619 1136 aa13.71□□□□□ -0.21
NPHS1-201ENST00000353632 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.71□□□□□ -0.21
NPHS1-201ENST00000353632 V9GYY5 206 aaPredicted RBP13.71□□□□□ -0.21
NPHS1-201ENST00000353632 GADD45BO75293 160 aaPredicted RBP13.71□□□□□ -0.22
NPHS1-201ENST00000353632 EIF4A2Q14240 407 aaKnown RBP13.71□□□□□ -0.22
NPHS1-201ENST00000353632 CNTROBQ8N137 903 aa13.71□□□□□ -0.22
NPHS1-201ENST00000353632 FAM184AQ8NB25 1140 aa13.71□□□□□ -0.22
NPHS1-201ENST00000353632 SYNMO15061 1565 aa13.7□□□□□ -0.22
NPHS1-201ENST00000353632 IBTKQ9P2D0 1353 aaPredicted RBP13.7□□□□□ -0.22
NPHS1-201ENST00000353632 ZNF445P59923 1031 aa13.7□□□□□ -0.22
NPHS1-201ENST00000353632 PALD1Q9ULE6 856 aa13.7□□□□□ -0.22
NPHS1-201ENST00000353632 PREX2Q70Z35 1606 aa13.7□□□□□ -0.22
NPHS1-201ENST00000353632 MSH6P52701 1360 aa13.7□□□□□ -0.22
NPHS1-201ENST00000353632 BECN2A8MW95 431 aa13.7□□□□□ -0.22
NPHS1-201ENST00000353632 MCM2P49736 904 aa13.7□□□□□ -0.22
NPHS1-201ENST00000353632 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
NPHS1-201ENST00000353632 ZBTB9Q96C00 473 aa13.7□□□□□ -0.22
NPHS1-201ENST00000353632 FMNL2Q96PY5 1086 aa13.7□□□□□ -0.22
NPHS1-201ENST00000353632 ABTB2Q8N961 1025 aa13.69□□□□□ -0.22
NPHS1-201ENST00000353632 FSD1Q9BTV5 496 aa13.69□□□□□ -0.22
NPHS1-201ENST00000353632 KDM5AP29375 1690 aaKnown RBP13.69□□□□□ -0.22
NPHS1-201ENST00000353632 GOLGA6L19H0YKK7 550 aa13.69□□□□□ -0.22
NPHS1-201ENST00000353632 GORABQ5T7V8 394 aa13.69□□□□□ -0.22
NPHS1-201ENST00000353632 DDX11Q96FC9 970 aa13.69□□□□□ -0.22
NPHS1-201ENST00000353632 ESYT1Q9BSJ8 1104 aa13.69□□□□□ -0.22
NPHS1-201ENST00000353632 SRCIN1Q9C0H9 1055 aa13.69□□□□□ -0.22
NPHS1-201ENST00000353632 ZNF518AQ6AHZ1 1483 aa13.69□□□□□ -0.22
NPHS1-201ENST00000353632 DDIT3P35638 169 aa13.69□□□□□ -0.22
NPHS1-201ENST00000353632 TAF7Q15545 349 aaPredicted RBP13.69□□□□□ -0.22
NPHS1-201ENST00000353632 LARP1BQ659C4 914 aaKnown RBP13.69□□□□□ -0.22
NPHS1-201ENST00000353632 RUFY2Q8WXA3 655 aa13.69□□□□□ -0.22
NPHS1-201ENST00000353632 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.69□□□□□ -0.22
NPHS1-201ENST00000353632 G3BP1Q13283 466 aaKnown RBP eCLIP13.68□□□□□ -0.22
NPHS1-201ENST00000353632 FAM173BQ6P4H8 233 aa13.68□□□□□ -0.22
NPHS1-201ENST00000353632 PHF23Q9BUL5 403 aaPredicted RBP13.68□□□□□ -0.22
NPHS1-201ENST00000353632 NCOA3Q9Y6Q9 1424 aa13.68□□□□□ -0.22
NPHS1-201ENST00000353632 LAMC1P11047 1609 aa13.68□□□□□ -0.22
NPHS1-201ENST00000353632 PNMA6EA0A0J9YXQ4 647 aa13.67□□□□□ -0.22
NPHS1-201ENST00000353632 PPP1R42Q7Z4L9 355 aa13.67□□□□□ -0.22
NPHS1-201ENST00000353632 KIF2CQ99661 725 aa13.67□□□□□ -0.22
NPHS1-201ENST00000353632 CSB-PGBD3P0DP91 1061 aa13.67□□□□□ -0.22
NPHS1-201ENST00000353632 IL13P35225 146 aa13.67□□□□□ -0.22
NPHS1-201ENST00000353632 PDE4CQ08493 712 aa13.67□□□□□ -0.22
NPHS1-201ENST00000353632 SF3A1Q15459 793 aaKnown RBP13.67□□□□□ -0.22
NPHS1-201ENST00000353632 CCDC112Q8NEF3 446 aa13.67□□□□□ -0.22
NPHS1-201ENST00000353632 FILIP1Q7Z7B0 1213 aa13.67□□□□□ -0.22
NPHS1-201ENST00000353632 AACSQ86V21 672 aa13.67□□□□□ -0.22
NPHS1-201ENST00000353632 CCAR2Q8N163 923 aaKnown RBP13.67□□□□□ -0.22
NPHS1-201ENST00000353632 DNAJC2Q99543 621 aaKnown RBP13.67□□□□□ -0.22
NPHS1-201ENST00000353632 CCDC8Q9H0W5 538 aaPredicted RBP13.67□□□□□ -0.22
NPHS1-201ENST00000353632 EID1Q9Y6B2 187 aa13.67□□□□□ -0.22
NPHS1-201ENST00000353632 PDRG1Q9NUG6 133 aa13.66□□□□□ -0.22
NPHS1-201ENST00000353632 PLXNC1O60486 1568 aa13.66□□□□□ -0.22
NPHS1-201ENST00000353632 ERCC6L2Q5T890 1561 aa13.66□□□□□ -0.22
NPHS1-201ENST00000353632 MTHFSDQ2M296 383 aaKnown RBP13.66□□□□□ -0.22
NPHS1-201ENST00000353632 CYP46A1Q9Y6A2 500 aa13.66□□□□□ -0.22
NPHS1-201ENST00000353632 MYO5CQ9NQX4 1742 aa13.65□□□□□ -0.22
NPHS1-201ENST00000353632 STK11IPQ8N1F8 1099 aa13.65□□□□□ -0.22
NPHS1-201ENST00000353632 BOLA2Q9H3K6 86 aa13.65□□□□□ -0.22
NPHS1-201ENST00000353632 TRMT1Q9NXH9 659 aaKnown RBP13.65□□□□□ -0.22
NPHS1-201ENST00000353632 DNM1Q05193 864 aaKnown RBP13.65□□□□□ -0.22
NPHS1-201ENST00000353632 NEUROD6Q96NK8 337 aa13.65□□□□□ -0.22
NPHS1-201ENST00000353632 NPATQ14207 1427 aa13.64□□□□□ -0.23
NPHS1-201ENST00000353632 MYL6BP14649 208 aa13.64□□□□□ -0.23
NPHS1-201ENST00000353632 GNL2Q13823 731 aaKnown RBP13.64□□□□□ -0.23
NPHS1-201ENST00000353632 MYRIPQ8NFW9 859 aa13.64□□□□□ -0.23
NPHS1-201ENST00000353632 CHMP4AQ9BY43 222 aa13.64□□□□□ -0.23
NPHS1-201ENST00000353632 ASXL2Q76L83 1435 aa13.64□□□□□ -0.23
NPHS1-201ENST00000353632 STX6O43752 255 aa13.64□□□□□ -0.23
NPHS1-201ENST00000353632 C1orf141Q5JVX7 400 aa13.64□□□□□ -0.23
NPHS1-201ENST00000353632 PRIMPOLQ96LW4 560 aa13.64□□□□□ -0.23
NPHS1-201ENST00000353632 PHAXQ9H814 394 aaKnown RBP13.64□□□□□ -0.23
NPHS1-201ENST00000353632 ACEP12821 1306 aa13.64□□□□□ -0.23
NPHS1-201ENST00000353632 RIOK3O14730 519 aaKnown RBP13.64□□□□□ -0.23
NPHS1-201ENST00000353632 CCDC183Q5T5S1 534 aa13.64□□□□□ -0.23
NPHS1-201ENST00000353632 TNMDQ9H2S6 317 aa13.64□□□□□ -0.23
NPHS1-201ENST00000353632 BCL2L12Q9HB09 334 aa13.64□□□□□ -0.23
NPHS1-201ENST00000353632 PA2G4Q9UQ80 394 aaKnown RBP13.64□□□□□ -0.23
NPHS1-201ENST00000353632 PI4KAP2A4QPH2 592 aa13.63□□□□□ -0.23
NPHS1-201ENST00000353632 CCDC192P0DO97 292 aa13.63□□□□□ -0.23
NPHS1-201ENST00000353632 TNNT1P13805 278 aa13.63□□□□□ -0.23
NPHS1-201ENST00000353632 CHMLP26374 656 aa13.63□□□□□ -0.23
NPHS1-201ENST00000353632 GJB2P29033 226 aa13.63□□□□□ -0.23
NPHS1-201ENST00000353632 HOMER1Q86YM7 354 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms