RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 PRKCSHP14314 528 aaPredicted RBP16.52■□□□□ 0.23
HIPK3-201ENST00000303296 NLRP6P59044 892 aa16.52■□□□□ 0.23
HIPK3-201ENST00000303296 TCERG1LQ5VWI1 586 aa16.52■□□□□ 0.23
HIPK3-201ENST00000303296 RPUSD2Q8IZ73 545 aaKnown RBP16.52■□□□□ 0.23
HIPK3-201ENST00000303296 PDCL2Q8N4E4 241 aa16.52■□□□□ 0.23
HIPK3-201ENST00000303296 CEP131Q9UPN4 1083 aa16.52■□□□□ 0.23
HIPK3-201ENST00000303296 VGFO15240 615 aaPredicted RBP16.51■□□□□ 0.23
HIPK3-201ENST00000303296 CTR9Q6PD62 1173 aa16.51■□□□□ 0.23
HIPK3-201ENST00000303296 SYCP3Q8IZU3 236 aa16.51■□□□□ 0.23
HIPK3-201ENST00000303296 PAFAH1B1P43034 410 aa16.51■□□□□ 0.23
HIPK3-201ENST00000303296 ESCO1Q5FWF5 840 aa16.51■□□□□ 0.23
HIPK3-201ENST00000303296 ZSCAN25Q6NSZ9 544 aa16.51■□□□□ 0.23
HIPK3-201ENST00000303296 NUP62CLQ9H1M0 184 aa16.51■□□□□ 0.23
HIPK3-201ENST00000303296 CWC27Q6UX04 472 aaKnown RBP16.51■□□□□ 0.23
HIPK3-201ENST00000303296 DPH6Q7L8W6 267 aa16.51■□□□□ 0.23
HIPK3-201ENST00000303296 SMC1BQ8NDV3 1235 aa16.51■□□□□ 0.23
HIPK3-201ENST00000303296 CUL5Q93034 780 aa16.51■□□□□ 0.23
HIPK3-201ENST00000303296 GBP3Q9H0R5 595 aa16.51■□□□□ 0.23
HIPK3-201ENST00000303296 SLC4A8Q2Y0W8 1093 aa16.51■□□□□ 0.23
HIPK3-201ENST00000303296 MCM2P49736 904 aa16.51■□□□□ 0.23
HIPK3-201ENST00000303296 TOM1L2Q6ZVM7 507 aa16.51■□□□□ 0.23
HIPK3-201ENST00000303296 CCDC144CPQ8IYA2 1237 aa16.5■□□□□ 0.23
HIPK3-201ENST00000303296 GNAI2P04899 355 aa16.5■□□□□ 0.23
HIPK3-201ENST00000303296 ACTN2P35609 894 aa16.5■□□□□ 0.23
HIPK3-201ENST00000303296 GTPBP4Q9BZE4 634 aaKnown RBP16.5■□□□□ 0.23
HIPK3-201ENST00000303296 SPECC1LQ69YQ0 1117 aa16.5■□□□□ 0.23
HIPK3-201ENST00000303296 BICD1Q96G01 975 aa16.5■□□□□ 0.23
HIPK3-201ENST00000303296 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
HIPK3-201ENST00000303296 NOL3O60936 208 aaKnown RBP16.5■□□□□ 0.23
HIPK3-201ENST00000303296 SEPT6Q14141 434 aa16.5■□□□□ 0.23
HIPK3-201ENST00000303296 MRVI1Q9Y6F6 885 aa16.49■□□□□ 0.23
HIPK3-201ENST00000303296 ANAPC4Q9UJX5 808 aa16.49■□□□□ 0.23
HIPK3-201ENST00000303296 ZBTB9Q96C00 473 aa16.49■□□□□ 0.23
HIPK3-201ENST00000303296 JAKMIP1Q96N16 626 aaKnown RBP16.49■□□□□ 0.23
HIPK3-201ENST00000303296 ANKIB1Q9P2G1 1089 aa16.49■□□□□ 0.23
HIPK3-201ENST00000303296 GNAI3P08754 354 aa16.48■□□□□ 0.23
HIPK3-201ENST00000303296 AACSQ86V21 672 aa16.48■□□□□ 0.23
HIPK3-201ENST00000303296 STAC3Q96MF2 364 aa16.48■□□□□ 0.23
HIPK3-201ENST00000303296 GUCY1B3Q02153 619 aa16.48■□□□□ 0.23
HIPK3-201ENST00000303296 NAA25Q14CX7 972 aa16.48■□□□□ 0.23
HIPK3-201ENST00000303296 BLOC1S2Q6QNY1 142 aa16.48■□□□□ 0.23
HIPK3-201ENST00000303296 TRMT1Q9NXH9 659 aaKnown RBP16.48■□□□□ 0.23
HIPK3-201ENST00000303296 FAM184BQ9ULE4 1060 aa16.48■□□□□ 0.23
HIPK3-201ENST00000303296 GGNBP2Q9H3C7 697 aa16.48■□□□□ 0.23
HIPK3-201ENST00000303296 LRRC45Q96CN5 670 aa16.48■□□□□ 0.23
HIPK3-201ENST00000303296 PTPN14Q15678 1187 aa16.47■□□□□ 0.23
HIPK3-201ENST00000303296 IQCGQ9H095 443 aaKnown RBP16.47■□□□□ 0.23
HIPK3-201ENST00000303296 WDR33Q9C0J8 1336 aaKnown RBP16.47■□□□□ 0.23
HIPK3-201ENST00000303296 USO1O60763 962 aaKnown RBP16.47■□□□□ 0.23
HIPK3-201ENST00000303296 SIRT1Q96EB6 747 aa16.47■□□□□ 0.23
HIPK3-201ENST00000303296 CEP135Q66GS9 1140 aa16.47■□□□□ 0.23
HIPK3-201ENST00000303296 EPSTI1Q96J88 318 aa16.47■□□□□ 0.23
HIPK3-201ENST00000303296 ERCC3P19447 782 aa16.47■□□□□ 0.23
HIPK3-201ENST00000303296 PDRG1Q9NUG6 133 aa16.47■□□□□ 0.23
HIPK3-201ENST00000303296 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.47■□□□□ 0.23
HIPK3-201ENST00000303296 V9GYY5 206 aaPredicted RBP16.47■□□□□ 0.23
HIPK3-201ENST00000303296 PFDN4Q9NQP4 134 aa16.47■□□□□ 0.23
HIPK3-201ENST00000303296 MCM3P25205 808 aa16.46■□□□□ 0.23
HIPK3-201ENST00000303296 CARMIL2Q6F5E8 1435 aa16.46■□□□□ 0.23
HIPK3-201ENST00000303296 GTF2F1P35269 517 aaKnown RBP eCLIP16.46■□□□□ 0.23
HIPK3-201ENST00000303296 FEZ2Q9UHY8 353 aaPredicted RBP16.46■□□□□ 0.23
HIPK3-201ENST00000303296 ATP2B3Q16720 1220 aa16.46■□□□□ 0.23
HIPK3-201ENST00000303296 AIDAQ96BJ3 306 aa16.46■□□□□ 0.23
HIPK3-201ENST00000303296 MYO1BO43795 1136 aa16.46■□□□□ 0.22
HIPK3-201ENST00000303296 CCDC144AA2RUR9 1427 aa16.46■□□□□ 0.22
HIPK3-201ENST00000303296 FGFR1OPO95684 399 aaKnown RBP16.45■□□□□ 0.22
HIPK3-201ENST00000303296 PLEKHO1Q53GL0 409 aaPredicted RBP16.45■□□□□ 0.22
HIPK3-201ENST00000303296 RAB3GAP2Q9H2M9 1393 aa16.45■□□□□ 0.22
HIPK3-201ENST00000303296 ZBTB16Q05516 673 aa16.45■□□□□ 0.22
HIPK3-201ENST00000303296 GJC1P36383 396 aa16.45■□□□□ 0.22
HIPK3-201ENST00000303296 WASF1Q92558 559 aa16.45■□□□□ 0.22
HIPK3-201ENST00000303296 TATP17735 454 aaPredicted RBP16.45■□□□□ 0.22
HIPK3-201ENST00000303296 UACAQ9BZF9 1416 aa16.45■□□□□ 0.22
HIPK3-201ENST00000303296 TOP1P11387 765 aaKnown RBP16.45■□□□□ 0.22
HIPK3-201ENST00000303296 IGHMBP2P38935 993 aaKnown RBP16.45■□□□□ 0.22
HIPK3-201ENST00000303296 SNX16P57768 344 aa16.45■□□□□ 0.22
HIPK3-201ENST00000303296 CKAP2LQ8IYA6 745 aa16.45■□□□□ 0.22
HIPK3-201ENST00000303296 VAT1LQ9HCJ6 419 aa16.44■□□□□ 0.22
HIPK3-201ENST00000303296 CABP2Q9NPB3 220 aa16.44■□□□□ 0.22
HIPK3-201ENST00000303296 CGNQ9P2M7 1197 aaKnown RBP16.44■□□□□ 0.22
HIPK3-201ENST00000303296 SMG6Q86US8 1419 aaKnown RBP16.44■□□□□ 0.22
HIPK3-201ENST00000303296 SMARCC1Q92922 1105 aaPredicted RBP16.44■□□□□ 0.22
HIPK3-201ENST00000303296 MTIF2P46199 727 aaKnown RBP16.44■□□□□ 0.22
HIPK3-201ENST00000303296 NLRP5P59047 1200 aa16.44■□□□□ 0.22
HIPK3-201ENST00000303296 MNAT1P51948 309 aa16.44■□□□□ 0.22
HIPK3-201ENST00000303296 CETN1Q12798 172 aa16.44■□□□□ 0.22
HIPK3-201ENST00000303296 UTP14AQ9BVJ6 771 aaKnown RBP16.44■□□□□ 0.22
HIPK3-201ENST00000303296 CWC25Q9NXE8 425 aaPredicted RBP16.44■□□□□ 0.22
HIPK3-201ENST00000303296 IL27Q8NEV9 243 aa16.43■□□□□ 0.22
HIPK3-201ENST00000303296 NAA15Q9BXJ9 866 aaKnown RBP16.43■□□□□ 0.22
HIPK3-201ENST00000303296 JADE2Q9NQC1 790 aa16.43■□□□□ 0.22
HIPK3-201ENST00000303296 TMEM110-MUSTN1A8MSY1 372 aa16.43■□□□□ 0.22
HIPK3-201ENST00000303296 TMEM266Q2M3C6 531 aa16.43■□□□□ 0.22
HIPK3-201ENST00000303296 ISM2Q6H9L7 571 aa16.43■□□□□ 0.22
HIPK3-201ENST00000303296 SEPT14Q6ZU15 432 aa16.43■□□□□ 0.22
HIPK3-201ENST00000303296 DDX46Q7L014 1031 aaKnown RBP16.43■□□□□ 0.22
HIPK3-201ENST00000303296 RANBP6O60518 1105 aaKnown RBP16.43■□□□□ 0.22
HIPK3-201ENST00000303296 WRNQ14191 1432 aaPredicted RBP eCLIP16.43■□□□□ 0.22
HIPK3-201ENST00000303296 ZNF444Q8N0Y2 327 aaPredicted RBP16.42■□□□□ 0.22
HIPK3-201ENST00000303296 PROCA1Q8NCQ7 364 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 397.4 ms