RNA–Protein interactions for RNA: ENST00000296142.3

RTP3-201, Transcript of receptor transporter protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP3, Length 1,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3-201ENST00000296142 TMOD3Q9NYL9 352 aa11.62□□□□□ -0.55
RTP3-201ENST00000296142 BCS1LQ9Y276 419 aa11.62□□□□□ -0.55
RTP3-201ENST00000296142 KIF13BQ9NQT8 1826 aa11.62□□□□□ -0.55
RTP3-201ENST00000296142 NSD3Q9BZ95 1437 aa11.62□□□□□ -0.55
RTP3-201ENST00000296142 CICQ96RK0 1608 aaPredicted RBP11.62□□□□□ -0.55
RTP3-201ENST00000296142 RBM42Q9BTD8 480 aaKnown RBP11.61□□□□□ -0.55
RTP3-201ENST00000296142 ATG3Q9NT62 314 aa11.61□□□□□ -0.55
RTP3-201ENST00000296142 SPG7Q9UQ90 795 aa11.61□□□□□ -0.55
RTP3-201ENST00000296142 BRCA1P38398 1863 aaKnown RBP11.61□□□□□ -0.55
RTP3-201ENST00000296142 HTRA3P83110 453 aa11.6□□□□□ -0.55
RTP3-201ENST00000296142 ARHGAP27Q6ZUM4 889 aa11.6□□□□□ -0.55
RTP3-201ENST00000296142 SLC4A9Q96Q91 983 aa11.6□□□□□ -0.55
RTP3-201ENST00000296142 CCDC88AQ3V6T2 1871 aa11.6□□□□□ -0.55
RTP3-201ENST00000296142 ANKRD26Q9UPS8 1709 aa11.6□□□□□ -0.55
RTP3-201ENST00000296142 SSFA2P28290 1259 aa11.6□□□□□ -0.55
RTP3-201ENST00000296142 NKX1-1Q15270 411 aaPredicted RBP11.6□□□□□ -0.55
RTP3-201ENST00000296142 NMRK2Q9NPI5 230 aa11.6□□□□□ -0.55
RTP3-201ENST00000296142 PXDNLA1KZ92 1463 aa11.6□□□□□ -0.55
RTP3-201ENST00000296142 C4AP0C0L4 1744 aa11.59□□□□□ -0.55
RTP3-201ENST00000296142 SBF1O95248 1867 aa11.59□□□□□ -0.55
RTP3-201ENST00000296142 PHKG2P15735 406 aa11.59□□□□□ -0.55
RTP3-201ENST00000296142 DPEP1P16444 411 aa11.59□□□□□ -0.55
RTP3-201ENST00000296142 COL5A3P25940 1745 aaPredicted RBP11.58□□□□□ -0.56
RTP3-201ENST00000296142 VIRMAQ69YN4 1812 aaKnown RBP11.58□□□□□ -0.56
RTP3-201ENST00000296142 FCHSD2O94868 740 aa11.58□□□□□ -0.56
RTP3-201ENST00000296142 IFNL2Q8IZJ0 200 aa11.58□□□□□ -0.56
RTP3-201ENST00000296142 ARHGEF1Q92888 912 aaKnown RBP11.58□□□□□ -0.56
RTP3-201ENST00000296142 POLKQ9UBT6 870 aa11.58□□□□□ -0.56
RTP3-201ENST00000296142 EIF4A2Q14240 407 aaKnown RBP11.57□□□□□ -0.56
RTP3-201ENST00000296142 TRAPPC3LQ5T215 181 aa11.57□□□□□ -0.56
RTP3-201ENST00000296142 SRP68Q9UHB9 627 aaKnown RBP11.57□□□□□ -0.56
RTP3-201ENST00000296142 RTCBQ9Y3I0 505 aaKnown RBP11.57□□□□□ -0.56
RTP3-201ENST00000296142 WASHC2AQ641Q2 1341 aa11.57□□□□□ -0.56
RTP3-201ENST00000296142 ARFGEF1Q9Y6D6 1849 aa11.56□□□□□ -0.56
RTP3-201ENST00000296142 NCAPD2Q15021 1401 aa11.56□□□□□ -0.56
RTP3-201ENST00000296142 PTCD1O75127 700 aaKnown RBP11.56□□□□□ -0.56
RTP3-201ENST00000296142 WDR90Q96KV7 1748 aa11.55□□□□□ -0.56
RTP3-201ENST00000296142 GYS1P13807 737 aa11.55□□□□□ -0.56
RTP3-201ENST00000296142 RFC4P35249 363 aa11.55□□□□□ -0.56
RTP3-201ENST00000296142 KIF24Q5T7B8 1368 aa11.55□□□□□ -0.56
RTP3-201ENST00000296142 SLC24A1O60721 1099 aa11.54□□□□□ -0.56
RTP3-201ENST00000296142 C9orf131Q5VYM1 1079 aa11.54□□□□□ -0.56
RTP3-201ENST00000296142 AEBP1Q8IUX7 1158 aa11.54□□□□□ -0.56
RTP3-201ENST00000296142 DNAJC5GQ8N7S2 189 aa11.54□□□□□ -0.56
RTP3-201ENST00000296142 PARP3Q9Y6F1 533 aa11.54□□□□□ -0.56
RTP3-201ENST00000296142 KDRP35968 1356 aa11.54□□□□□ -0.56
RTP3-201ENST00000296142 AFDNP55196 1824 aaKnown RBP11.54□□□□□ -0.56
RTP3-201ENST00000296142 C10orf71Q711Q0 1435 aa11.53□□□□□ -0.56
RTP3-201ENST00000296142 CAPN15O75808 1086 aa11.53□□□□□ -0.56
RTP3-201ENST00000296142 TOMM70O94826 608 aa11.53□□□□□ -0.56
RTP3-201ENST00000296142 KCNA3P22001 575 aa11.53□□□□□ -0.56
RTP3-201ENST00000296142 CHRNA5P30532 468 aa11.53□□□□□ -0.56
RTP3-201ENST00000296142 APLP1P51693 650 aa11.53□□□□□ -0.56
RTP3-201ENST00000296142 CABP4P57796 275 aa11.53□□□□□ -0.56
RTP3-201ENST00000296142 CDCA8Q53HL2 280 aa11.53□□□□□ -0.56
RTP3-201ENST00000296142 ZNF530Q6P9A1 599 aaPredicted RBP11.53□□□□□ -0.56
RTP3-201ENST00000296142 NLGN1Q8N2Q7 840 aa11.53□□□□□ -0.56
RTP3-201ENST00000296142 CCDC87Q9NVE4 849 aa11.53□□□□□ -0.56
RTP3-201ENST00000296142 KCPQ6ZWJ8 1503 aa11.52□□□□□ -0.57
RTP3-201ENST00000296142 KDM6AO15550 1401 aaPredicted RBP11.52□□□□□ -0.57
RTP3-201ENST00000296142 RPS6KA4O75676 772 aa11.52□□□□□ -0.57
RTP3-201ENST00000296142 HMGB2P26583 209 aaKnown RBP11.52□□□□□ -0.57
RTP3-201ENST00000296142 TGFB2P61812 414 aa11.52□□□□□ -0.57
RTP3-201ENST00000296142 FKBP8Q14318 412 aa11.52□□□□□ -0.57
RTP3-201ENST00000296142 MIER1Q8N108 512 aa11.52□□□□□ -0.57
RTP3-201ENST00000296142 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.52□□□□□ -0.57
RTP3-201ENST00000296142 TJP1Q07157 1748 aa11.52□□□□□ -0.57
RTP3-201ENST00000296142 CRKLP46109 303 aaKnown RBP11.51□□□□□ -0.57
RTP3-201ENST00000296142 DDR1Q08345 913 aa11.51□□□□□ -0.57
RTP3-201ENST00000296142 NFATC2IPQ8NCF5 419 aa11.51□□□□□ -0.57
RTP3-201ENST00000296142 RRAGCQ9HB90 399 aa11.51□□□□□ -0.57
RTP3-201ENST00000296142 RNF181Q9P0P0 153 aa11.51□□□□□ -0.57
RTP3-201ENST00000296142 SCN11AQ9UI33 1791 aa11.51□□□□□ -0.57
RTP3-201ENST00000296142 PCNTO95613 3336 aa11.51□□□□□ -0.57
RTP3-201ENST00000296142 C16orf71Q8IYS4 520 aaPredicted RBP11.5□□□□□ -0.57
RTP3-201ENST00000296142 ZNF831Q5JPB2 1677 aa11.49□□□□□ -0.57
RTP3-201ENST00000296142 CNTNAP4Q9C0A0 1308 aa11.49□□□□□ -0.57
RTP3-201ENST00000296142 CACNA1SQ13698 1873 aa11.49□□□□□ -0.57
RTP3-201ENST00000296142 ERVV-2B6SEH9 535 aa11.49□□□□□ -0.57
RTP3-201ENST00000296142 MTHFSP49914 203 aa11.49□□□□□ -0.57
RTP3-201ENST00000296142 RASSF7Q02833 373 aa11.49□□□□□ -0.57
RTP3-201ENST00000296142 PLEKHO1Q53GL0 409 aaPredicted RBP11.49□□□□□ -0.57
RTP3-201ENST00000296142 COL13A1Q5TAT6 717 aaPredicted RBP11.49□□□□□ -0.57
RTP3-201ENST00000296142 RC3H1Q5TC82 1133 aaKnown RBP11.49□□□□□ -0.57
RTP3-201ENST00000296142 DCAF5Q96JK2 942 aa11.49□□□□□ -0.57
RTP3-201ENST00000296142 PIM2Q9P1W9 311 aa11.49□□□□□ -0.57
RTP3-201ENST00000296142 ADAMTS7Q9UKP4 1686 aa11.47□□□□□ -0.57
RTP3-201ENST00000296142 DALRD3Q5D0E6 543 aaKnown RBP11.47□□□□□ -0.57
RTP3-201ENST00000296142 C1orf141Q5JVX7 400 aa11.47□□□□□ -0.57
RTP3-201ENST00000296142 SULT6B1Q6IMI4 303 aa11.47□□□□□ -0.57
RTP3-201ENST00000296142 PANK3Q9H999 370 aa11.47□□□□□ -0.57
RTP3-201ENST00000296142 ADRA2BP18089 450 aa11.46□□□□□ -0.57
RTP3-201ENST00000296142 EIF4G2P78344 907 aaKnown RBP eCLIP11.46□□□□□ -0.57
RTP3-201ENST00000296142 SLC39A6Q13433 755 aa11.46□□□□□ -0.57
RTP3-201ENST00000296142 USPL1Q5W0Q7 1092 aa11.46□□□□□ -0.57
RTP3-201ENST00000296142 INTS5Q6P9B9 1019 aaKnown RBP11.46□□□□□ -0.57
RTP3-201ENST00000296142 DNAJC10Q8IXB1 793 aa11.46□□□□□ -0.57
RTP3-201ENST00000296142 USP42Q9H9J4 1324 aaKnown RBP11.45□□□□□ -0.58
RTP3-201ENST00000296142 POLRMTO00411 1230 aaKnown RBP11.45□□□□□ -0.58
RTP3-201ENST00000296142 HSP90AB1P08238 724 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms