RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 INTS4Q96HW7 963 aaKnown RBP9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 NUP62CLQ9H1M0 184 aa9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 REREQ9P2R6 1566 aa9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 LRRIQ1Q96JM4 1722 aa9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 FYB1O15117 783 aa9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 NEK4P51957 841 aa9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 GNAI2P04899 355 aa9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 CTNNA3Q9UI47 895 aa9.78□□□□□ -0.84
CACNA1D-201ENST00000288139 C1orf141Q5JVX7 400 aa9.77□□□□□ -0.84
CACNA1D-201ENST00000288139 SHTN1A0MZ66 631 aa9.77□□□□□ -0.84
CACNA1D-201ENST00000288139 CCDC30Q5VVM6 783 aa9.77□□□□□ -0.84
CACNA1D-201ENST00000288139 ADAMTS8Q9UP79 889 aa9.77□□□□□ -0.85
CACNA1D-201ENST00000288139 KDM5AP29375 1690 aaKnown RBP9.77□□□□□ -0.85
CACNA1D-201ENST00000288139 PTPN14Q15678 1187 aa9.77□□□□□ -0.85
CACNA1D-201ENST00000288139 RGS22Q8NE09 1264 aa9.77□□□□□ -0.85
CACNA1D-201ENST00000288139 PDZRN3Q9UPQ7 1066 aa9.77□□□□□ -0.85
CACNA1D-201ENST00000288139 MPHOSPH10O00566 681 aaKnown RBP9.77□□□□□ -0.85
CACNA1D-201ENST00000288139 UBTFL1P0CB47 393 aaPredicted RBP9.77□□□□□ -0.85
CACNA1D-201ENST00000288139 ANO10Q9NW15 660 aa9.76□□□□□ -0.85
CACNA1D-201ENST00000288139 UBE2HP62256 183 aa9.76□□□□□ -0.85
CACNA1D-201ENST00000288139 GIMAP7Q8NHV1 300 aa9.76□□□□□ -0.85
CACNA1D-201ENST00000288139 SREK1Q8WXA9 508 aaKnown RBP9.76□□□□□ -0.85
CACNA1D-201ENST00000288139 ZKSCAN5Q9Y2L8 839 aa9.76□□□□□ -0.85
CACNA1D-201ENST00000288139 CCDC181Q5TID7 509 aa9.76□□□□□ -0.85
CACNA1D-201ENST00000288139 SAMD1Q6SPF0 538 aaPredicted RBP9.76□□□□□ -0.85
CACNA1D-201ENST00000288139 MRC2Q9UBG0 1479 aa9.76□□□□□ -0.85
CACNA1D-201ENST00000288139 HMG20BQ9P0W2 317 aa9.76□□□□□ -0.85
CACNA1D-201ENST00000288139 PPFIBP1Q86W92 1011 aa9.76□□□□□ -0.85
CACNA1D-201ENST00000288139 PTPRCP08575 1304 aa9.75□□□□□ -0.85
CACNA1D-201ENST00000288139 SMC2O95347 1197 aa9.75□□□□□ -0.85
CACNA1D-201ENST00000288139 AXDND1Q5T1B0 1012 aaPredicted RBP9.75□□□□□ -0.85
CACNA1D-201ENST00000288139 SMC5Q8IY18 1101 aa9.75□□□□□ -0.85
CACNA1D-201ENST00000288139 JPH4Q96JJ6 628 aa9.75□□□□□ -0.85
CACNA1D-201ENST00000288139 VIMP08670 466 aaKnown RBP9.75□□□□□ -0.85
CACNA1D-201ENST00000288139 MRPS9P82933 396 aaKnown RBP9.75□□□□□ -0.85
CACNA1D-201ENST00000288139 RILPL2Q969X0 211 aa9.75□□□□□ -0.85
CACNA1D-201ENST00000288139 FAM114A2Q9NRY5 505 aa9.75□□□□□ -0.85
CACNA1D-201ENST00000288139 TEFQ10587 303 aa9.75□□□□□ -0.85
CACNA1D-201ENST00000288139 TTC5Q8N0Z6 440 aa9.75□□□□□ -0.85
CACNA1D-201ENST00000288139 RAB3IL1Q8TBN0 382 aa9.75□□□□□ -0.85
CACNA1D-201ENST00000288139 CRACR2AQ9BSW2 395 aa9.75□□□□□ -0.85
CACNA1D-201ENST00000288139 KRT18P05783 430 aaKnown RBP9.75□□□□□ -0.85
CACNA1D-201ENST00000288139 PLIN1O60240 522 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 LNPKQ9C0E8 428 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 ELP1O95163 1332 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 RAPGEF6Q8TEU7 1601 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 TRIM22Q8IYM9 498 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 PIBF1Q8WXW3 757 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 LRRCC1Q9C099 1032 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 DUOX2Q9NRD8 1548 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 BCL2L13Q9BXK5 485 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 PLXNC1O60486 1568 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 CACNA1FO60840 1977 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 MATR3P43243 847 aaKnown RBP eCLIP9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 CEP135Q66GS9 1140 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 CFAP65Q6ZU64 1925 aaKnown RBP9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 PPP4R3AQ6IN85 833 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 FMNL3Q8IVF7 1028 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 AK9Q5TCS8 1911 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 ZFYVE9O95405 1425 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 BMP15O95972 392 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 PRPF40AO75400 957 aaKnown RBP9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 AMPHP49418 695 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 ZNF692Q9BU19 519 aaPredicted RBP9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 CEP131Q9UPN4 1083 aa9.74□□□□□ -0.85
CACNA1D-201ENST00000288139 GOLIM4O00461 696 aa9.73□□□□□ -0.85
CACNA1D-201ENST00000288139 MYO9BQ13459 2157 aa9.73□□□□□ -0.85
CACNA1D-201ENST00000288139 CCDC148Q8NFR7 591 aa9.73□□□□□ -0.85
CACNA1D-201ENST00000288139 ATP6V1E1P36543 226 aa9.73□□□□□ -0.85
CACNA1D-201ENST00000288139 ZSCAN16Q9H4T2 348 aaPredicted RBP9.73□□□□□ -0.85
CACNA1D-201ENST00000288139 ANKRD36BQ8N2N9 1353 aa9.73□□□□□ -0.85
CACNA1D-201ENST00000288139 PANK1Q8TE04 598 aa9.73□□□□□ -0.85
CACNA1D-201ENST00000288139 NOL7Q9UMY1 257 aaKnown RBP9.73□□□□□ -0.85
CACNA1D-201ENST00000288139 NPHP3Q7Z494 1330 aa9.73□□□□□ -0.85
CACNA1D-201ENST00000288139 POLR3AO14802 1390 aaPredicted RBP9.73□□□□□ -0.85
CACNA1D-201ENST00000288139 SEPT6Q14141 434 aa9.73□□□□□ -0.85
CACNA1D-201ENST00000288139 STX1AQ16623 288 aa9.73□□□□□ -0.85
CACNA1D-201ENST00000288139 FAM200AQ8TCP9 573 aa9.73□□□□□ -0.85
CACNA1D-201ENST00000288139 BLMP54132 1417 aaPredicted RBP9.73□□□□□ -0.85
CACNA1D-201ENST00000288139 ZSCAN25Q6NSZ9 544 aa9.73□□□□□ -0.85
CACNA1D-201ENST00000288139 STK38Q15208 465 aa9.72□□□□□ -0.85
CACNA1D-201ENST00000288139 UPF3BQ9BZI7 483 aaKnown RBP9.72□□□□□ -0.85
CACNA1D-201ENST00000288139 ADGRL1O94910 1474 aa9.72□□□□□ -0.85
CACNA1D-201ENST00000288139 KANK3Q6NY19 840 aa9.72□□□□□ -0.85
CACNA1D-201ENST00000288139 ARHGAP29Q52LW3 1261 aa9.72□□□□□ -0.85
CACNA1D-201ENST00000288139 FKBP5Q13451 457 aaPredicted RBP9.72□□□□□ -0.85
CACNA1D-201ENST00000288139 SLC4A10Q6U841 1118 aa9.72□□□□□ -0.85
CACNA1D-201ENST00000288139 SPATA32Q96LK8 384 aa9.72□□□□□ -0.85
CACNA1D-201ENST00000288139 KIF5CO60282 957 aa9.72□□□□□ -0.85
CACNA1D-201ENST00000288139 GLRX3O76003 335 aaKnown RBP9.72□□□□□ -0.85
CACNA1D-201ENST00000288139 TCHPQ9BT92 498 aa9.72□□□□□ -0.85
CACNA1D-201ENST00000288139 ABCC2Q92887 1545 aa9.72□□□□□ -0.85
CACNA1D-201ENST00000288139 FGFR1OPO95684 399 aaKnown RBP9.71□□□□□ -0.85
CACNA1D-201ENST00000288139 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.71□□□□□ -0.85
CACNA1D-201ENST00000288139 CCDC196A0A1B0GTZ2 297 aa9.71□□□□□ -0.85
CACNA1D-201ENST00000288139 MYO18AQ92614 2054 aaKnown RBP9.71□□□□□ -0.85
CACNA1D-201ENST00000288139 PPP1R12BO60237 982 aaPredicted RBP9.71□□□□□ -0.85
CACNA1D-201ENST00000288139 CCDC6Q16204 474 aa9.71□□□□□ -0.85
CACNA1D-201ENST00000288139 HOOK3Q86VS8 718 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms