RNA–Protein interactions for RNA: ENST00000263671.9

CHRDL2-201, Transcript of chordin like 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRDL2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-201ENST00000263671 TNNQ9UQP3 1299 aa16.56■□□□□ 0.24
CHRDL2-201ENST00000263671 BTBD11A6QL63 1104 aa16.56■□□□□ 0.24
CHRDL2-201ENST00000263671 HSP90AB1P08238 724 aaKnown RBP16.56■□□□□ 0.24
CHRDL2-201ENST00000263671 SLC52A2Q9HAB3 445 aa16.56■□□□□ 0.24
CHRDL2-201ENST00000263671 PPP4R2Q9NY27 417 aa16.56■□□□□ 0.24
CHRDL2-201ENST00000263671 SPATA31A5Q5VU36 1347 aa16.55■□□□□ 0.24
CHRDL2-201ENST00000263671 SPATA31A7Q8IWB4 1347 aa16.55■□□□□ 0.24
CHRDL2-201ENST00000263671 KCNQ3O43525 872 aa16.55■□□□□ 0.24
CHRDL2-201ENST00000263671 MRPL50Q8N5N7 158 aaKnown RBP16.55■□□□□ 0.24
CHRDL2-201ENST00000263671 DDX54Q8TDD1 881 aaKnown RBP16.55■□□□□ 0.24
CHRDL2-201ENST00000263671 NGLY1Q96IV0 654 aa16.55■□□□□ 0.24
CHRDL2-201ENST00000263671 KIF16BQ96L93 1317 aa16.54■□□□□ 0.24
CHRDL2-201ENST00000263671 UNC5CLQ8IV45 518 aa16.54■□□□□ 0.24
CHRDL2-201ENST00000263671 TNS2Q63HR2 1409 aa16.54■□□□□ 0.24
CHRDL2-201ENST00000263671 BRPF1P55201 1214 aaPredicted RBP16.53■□□□□ 0.24
CHRDL2-201ENST00000263671 EIF4A1P60842 406 aaKnown RBP16.53■□□□□ 0.24
CHRDL2-201ENST00000263671 PDE3AQ14432 1141 aa16.53■□□□□ 0.24
CHRDL2-201ENST00000263671 ZKSCAN2Q63HK3 967 aa16.53■□□□□ 0.24
CHRDL2-201ENST00000263671 PANK1Q8TE04 598 aa16.53■□□□□ 0.24
CHRDL2-201ENST00000263671 NOB1Q9ULX3 412 aaKnown RBP16.53■□□□□ 0.24
CHRDL2-201ENST00000263671 RLBP1P12271 317 aa16.53■□□□□ 0.24
CHRDL2-201ENST00000263671 NKX1-1Q15270 411 aaPredicted RBP16.53■□□□□ 0.24
CHRDL2-201ENST00000263671 FNBP4Q8N3X1 1017 aaPredicted RBP16.53■□□□□ 0.24
CHRDL2-201ENST00000263671 THRAP3Q9Y2W1 955 aaKnown RBP16.53■□□□□ 0.24
CHRDL2-201ENST00000263671 TRIM27P14373 513 aa16.52■□□□□ 0.24
CHRDL2-201ENST00000263671 NFATC2IPQ8NCF5 419 aa16.52■□□□□ 0.24
CHRDL2-201ENST00000263671 CCDC9Q9Y3X0 531 aaKnown RBP16.52■□□□□ 0.24
CHRDL2-201ENST00000263671 PAPPAQ13219 1627 aa16.52■□□□□ 0.23
CHRDL2-201ENST00000263671 C5P01031 1676 aa16.51■□□□□ 0.23
CHRDL2-201ENST00000263671 CLUAP1Q96AJ1 413 aa16.51■□□□□ 0.23
CHRDL2-201ENST00000263671 ATF7IPQ6VMQ6 1270 aa16.5■□□□□ 0.23
CHRDL2-201ENST00000263671 SOS1Q07889 1333 aaPredicted RBP16.5■□□□□ 0.23
CHRDL2-201ENST00000263671 CABP4P57796 275 aa16.5■□□□□ 0.23
CHRDL2-201ENST00000263671 SLC39A6Q13433 755 aa16.5■□□□□ 0.23
CHRDL2-201ENST00000263671 VPS72Q15906 364 aa16.5■□□□□ 0.23
CHRDL2-201ENST00000263671 MEX3CQ5U5Q3 659 aaKnown RBP16.5■□□□□ 0.23
CHRDL2-201ENST00000263671 B4GALNT3Q6L9W6 998 aa16.5■□□□□ 0.23
CHRDL2-201ENST00000263671 COG6Q9Y2V7 657 aa16.5■□□□□ 0.23
CHRDL2-201ENST00000263671 GLI3P10071 1580 aa16.5■□□□□ 0.23
CHRDL2-201ENST00000263671 HEG1Q9ULI3 1381 aa16.49■□□□□ 0.23
CHRDL2-201ENST00000263671 CDCA7Q9BWT1 371 aaPredicted RBP16.49■□□□□ 0.23
CHRDL2-201ENST00000263671 ITGB4P16144 1822 aa16.49■□□□□ 0.23
CHRDL2-201ENST00000263671 UBR2Q8IWV8 1755 aa16.49■□□□□ 0.23
CHRDL2-201ENST00000263671 IPO8O15397 1037 aaKnown RBP16.48■□□□□ 0.23
CHRDL2-201ENST00000263671 ZNF790Q6PG37 636 aa16.48■□□□□ 0.23
CHRDL2-201ENST00000263671 BARGINQ6ZT62 677 aa16.48■□□□□ 0.23
CHRDL2-201ENST00000263671 DZIP1LQ8IYY4 767 aaKnown RBP16.48■□□□□ 0.23
CHRDL2-201ENST00000263671 USP21Q9UK80 565 aa16.48■□□□□ 0.23
CHRDL2-201ENST00000263671 DOT1LQ8TEK3 1739 aa16.48■□□□□ 0.23
CHRDL2-201ENST00000263671 ERVV-2B6SEH9 535 aa16.48■□□□□ 0.23
CHRDL2-201ENST00000263671 EXOC5O00471 708 aa16.48■□□□□ 0.23
CHRDL2-201ENST00000263671 FTSJ3Q8IY81 847 aaKnown RBP16.48■□□□□ 0.23
CHRDL2-201ENST00000263671 NECTIN2Q92692 538 aa16.48■□□□□ 0.23
CHRDL2-201ENST00000263671 HOXB7P09629 217 aa16.47■□□□□ 0.23
CHRDL2-201ENST00000263671 CCDC30Q5VVM6 783 aa16.47■□□□□ 0.23
CHRDL2-201ENST00000263671 CACNA1FO60840 1977 aa16.46■□□□□ 0.23
CHRDL2-201ENST00000263671 RGS12O14924 1447 aa16.46■□□□□ 0.23
CHRDL2-201ENST00000263671 SLC4A2P04920 1241 aa16.46■□□□□ 0.23
CHRDL2-201ENST00000263671 HDGFL1Q5TGJ6 251 aa16.46■□□□□ 0.23
CHRDL2-201ENST00000263671 ARHGAP45Q92619 1136 aa16.46■□□□□ 0.23
CHRDL2-201ENST00000263671 AFF2P51816 1311 aa16.46■□□□□ 0.23
CHRDL2-201ENST00000263671 GIGYF1O75420 1035 aaPredicted RBP16.45■□□□□ 0.22
CHRDL2-201ENST00000263671 MS4A1P11836 297 aa16.45■□□□□ 0.22
CHRDL2-201ENST00000263671 DDB1Q16531 1140 aa16.45■□□□□ 0.22
CHRDL2-201ENST00000263671 PELP1Q8IZL8 1130 aaKnown RBP16.45■□□□□ 0.22
CHRDL2-201ENST00000263671 CCDC136Q96JN2 1154 aa16.45■□□□□ 0.22
CHRDL2-201ENST00000263671 THSD7AQ9UPZ6 1657 aa16.45■□□□□ 0.22
CHRDL2-201ENST00000263671 LAMB4A4D0S4 1761 aa16.45■□□□□ 0.22
CHRDL2-201ENST00000263671 PRAMEF22A3QJZ6 481 aa16.45■□□□□ 0.22
CHRDL2-201ENST00000263671 MVPQ14764 893 aaKnown RBP16.45■□□□□ 0.22
CHRDL2-201ENST00000263671 FAM98CQ17RN3 349 aaKnown RBP16.45■□□□□ 0.22
CHRDL2-201ENST00000263671 STK31Q9BXU1 1019 aa16.45■□□□□ 0.22
CHRDL2-201ENST00000263671 KCPQ6ZWJ8 1503 aa16.44■□□□□ 0.22
CHRDL2-201ENST00000263671 EIF2S2P20042 333 aaKnown RBP16.44■□□□□ 0.22
CHRDL2-201ENST00000263671 G2E3Q7L622 706 aa16.44■□□□□ 0.22
CHRDL2-201ENST00000263671 TTC5Q8N0Z6 440 aa16.44■□□□□ 0.22
CHRDL2-201ENST00000263671 TMEM57Q8N5G2 664 aa16.44■□□□□ 0.22
CHRDL2-201ENST00000263671 ZNF496Q96IT1 587 aaPredicted RBP16.44■□□□□ 0.22
CHRDL2-201ENST00000263671 ABCC4O15439 1325 aa16.44■□□□□ 0.22
CHRDL2-201ENST00000263671 ITPRIPQ8IWB1 547 aa16.42■□□□□ 0.22
CHRDL2-201ENST00000263671 API5Q9BZZ5 524 aaKnown RBP16.42■□□□□ 0.22
CHRDL2-201ENST00000263671 TMOD3Q9NYL9 352 aa16.42■□□□□ 0.22
CHRDL2-201ENST00000263671 PTPRCP08575 1304 aa16.42■□□□□ 0.22
CHRDL2-201ENST00000263671 ATRNO75882 1429 aa16.42■□□□□ 0.22
CHRDL2-201ENST00000263671 CHPF2Q9P2E5 772 aa16.42■□□□□ 0.22
CHRDL2-201ENST00000263671 MARCH10Q8NA82 808 aaPredicted RBP16.41■□□□□ 0.22
CHRDL2-201ENST00000263671 FMNL2Q96PY5 1086 aa16.41■□□□□ 0.22
CHRDL2-201ENST00000263671 BCL9O00512 1426 aa16.4■□□□□ 0.22
CHRDL2-201ENST00000263671 N4BP2Q86UW6 1770 aaPredicted RBP16.4■□□□□ 0.22
CHRDL2-201ENST00000263671 FLIIQ13045 1269 aa16.39■□□□□ 0.21
CHRDL2-201ENST00000263671 PIGBQ92521 554 aa16.39■□□□□ 0.21
CHRDL2-201ENST00000263671 GJD4Q96KN9 370 aaPredicted RBP16.39■□□□□ 0.21
CHRDL2-201ENST00000263671 DDX19BQ9UMR2 479 aa16.39■□□□□ 0.21
CHRDL2-201ENST00000263671 ANXA1P04083 346 aa16.38■□□□□ 0.21
CHRDL2-201ENST00000263671 SNRPA1P09661 255 aaKnown RBP16.38■□□□□ 0.21
CHRDL2-201ENST00000263671 CHMP4AQ9BY43 222 aa16.38■□□□□ 0.21
CHRDL2-201ENST00000263671 PHAXQ9H814 394 aaKnown RBP16.38■□□□□ 0.21
CHRDL2-201ENST00000263671 A0A0G2JS52 829 aa16.37■□□□□ 0.21
CHRDL2-201ENST00000263671 MYT1Q01538 1121 aa16.37■□□□□ 0.21
CHRDL2-201ENST00000263671 PROSER3Q2NL68 480 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms