RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 ZNF692Q9BU19 519 aaPredicted RBP12.67□□□□□ -0.38
CSNK1A1-201ENST00000261798 CCDC171Q6TFL3 1326 aa12.67□□□□□ -0.38
CSNK1A1-201ENST00000261798 KIF5CO60282 957 aa12.67□□□□□ -0.38
CSNK1A1-201ENST00000261798 TTC22Q5TAA0 569 aa12.67□□□□□ -0.38
CSNK1A1-201ENST00000261798 CCDC148Q8NFR7 591 aa12.67□□□□□ -0.38
CSNK1A1-201ENST00000261798 TMX3Q96JJ7 454 aa12.67□□□□□ -0.38
CSNK1A1-201ENST00000261798 CDK19Q9BWU1 502 aa12.67□□□□□ -0.38
CSNK1A1-201ENST00000261798 CTNNA3Q9UI47 895 aa12.67□□□□□ -0.38
CSNK1A1-201ENST00000261798 CASQ1P31415 396 aa12.67□□□□□ -0.38
CSNK1A1-201ENST00000261798 SNW1Q13573 536 aaKnown RBP12.67□□□□□ -0.38
CSNK1A1-201ENST00000261798 LRRFIP2Q9Y608 721 aaKnown RBP12.67□□□□□ -0.38
CSNK1A1-201ENST00000261798 PTPN23Q9H3S7 1636 aa12.67□□□□□ -0.38
CSNK1A1-201ENST00000261798 KIF4BQ2VIQ3 1234 aa12.67□□□□□ -0.38
CSNK1A1-201ENST00000261798 ZNF830Q96NB3 372 aaPredicted RBP12.67□□□□□ -0.38
CSNK1A1-201ENST00000261798 SIL1Q9H173 461 aa12.67□□□□□ -0.38
CSNK1A1-201ENST00000261798 RBM25P49756 843 aaKnown RBP12.66□□□□□ -0.38
CSNK1A1-201ENST00000261798 PSME1Q06323 249 aa12.66□□□□□ -0.38
CSNK1A1-201ENST00000261798 EPRSP07814 1512 aaKnown RBP12.66□□□□□ -0.38
CSNK1A1-201ENST00000261798 ABCC5O15440 1437 aa12.66□□□□□ -0.38
CSNK1A1-201ENST00000261798 MCM3P25205 808 aa12.66□□□□□ -0.38
CSNK1A1-201ENST00000261798 CCDC158Q5M9N0 1113 aa12.66□□□□□ -0.38
CSNK1A1-201ENST00000261798 MEX3CQ5U5Q3 659 aaKnown RBP12.66□□□□□ -0.38
CSNK1A1-201ENST00000261798 GIMAP7Q8NHV1 300 aa12.66□□□□□ -0.38
CSNK1A1-201ENST00000261798 STX1AQ16623 288 aa12.65□□□□□ -0.38
CSNK1A1-201ENST00000261798 PLEKHO1Q53GL0 409 aaPredicted RBP12.65□□□□□ -0.38
CSNK1A1-201ENST00000261798 HSP90AB2PQ58FF8 381 aa12.65□□□□□ -0.38
CSNK1A1-201ENST00000261798 TTC12Q9H892 705 aaPredicted RBP12.65□□□□□ -0.38
CSNK1A1-201ENST00000261798 GOLGA6L9A6NEM1 432 aa12.65□□□□□ -0.38
CSNK1A1-201ENST00000261798 G3V3G9 751 aa12.65□□□□□ -0.38
CSNK1A1-201ENST00000261798 POTEB2H3BUK9 544 aa12.65□□□□□ -0.38
CSNK1A1-201ENST00000261798 TERF1P54274 439 aa12.65□□□□□ -0.38
CSNK1A1-201ENST00000261798 DCAF8Q5TAQ9 597 aa12.65□□□□□ -0.38
CSNK1A1-201ENST00000261798 RPGRIP1LQ68CZ1 1315 aa12.65□□□□□ -0.38
CSNK1A1-201ENST00000261798 GIMAP6Q6P9H5 292 aa12.65□□□□□ -0.38
CSNK1A1-201ENST00000261798 FAM200AQ8TCP9 573 aa12.65□□□□□ -0.38
CSNK1A1-201ENST00000261798 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.65□□□□□ -0.387e-8■■■□□ 15.2
CSNK1A1-201ENST00000261798 IL16Q14005 1332 aa12.65□□□□□ -0.38
CSNK1A1-201ENST00000261798 BBXQ8WY36 941 aaPredicted RBP12.65□□□□□ -0.38
CSNK1A1-201ENST00000261798 PARD3Q8TEW0 1356 aa12.65□□□□□ -0.39
CSNK1A1-201ENST00000261798 CENPHQ9H3R5 247 aa12.65□□□□□ -0.39
CSNK1A1-201ENST00000261798 NOL7Q9UMY1 257 aaKnown RBP12.65□□□□□ -0.39
CSNK1A1-201ENST00000261798 ODF2Q5BJF6 829 aa12.64□□□□□ -0.39
CSNK1A1-201ENST00000261798 TRIM34Q9BYJ4 488 aa12.64□□□□□ -0.39
CSNK1A1-201ENST00000261798 SEC24BO95487 1268 aa12.64□□□□□ -0.39
CSNK1A1-201ENST00000261798 GJB2P29033 226 aa12.64□□□□□ -0.39
CSNK1A1-201ENST00000261798 FEZ1Q99689 392 aa12.64□□□□□ -0.39
CSNK1A1-201ENST00000261798 ZSCAN22P10073 491 aaPredicted RBP12.64□□□□□ -0.39
CSNK1A1-201ENST00000261798 CCDC186Q7Z3E2 898 aa12.63□□□□□ -0.39
CSNK1A1-201ENST00000261798 TFIP11Q9UBB9 837 aaKnown RBP12.63□□□□□ -0.39
CSNK1A1-201ENST00000261798 RNF123Q5XPI4 1314 aa12.63□□□□□ -0.39
CSNK1A1-201ENST00000261798 CCDC141Q6ZP82 1450 aa12.63□□□□□ -0.39
CSNK1A1-201ENST00000261798 KIAA1328Q86T90 577 aa12.63□□□□□ -0.39
CSNK1A1-201ENST00000261798 CCDC150Q8NCX0 1101 aa12.63□□□□□ -0.39
CSNK1A1-201ENST00000261798 ARHGAP45Q92619 1136 aa12.63□□□□□ -0.39
CSNK1A1-201ENST00000261798 LMAN1P49257 510 aa12.63□□□□□ -0.39
CSNK1A1-201ENST00000261798 NESP48681 1621 aa12.63□□□□□ -0.39
CSNK1A1-201ENST00000261798 ANAPC15P60006 121 aa12.62□□□□□ -0.39
CSNK1A1-201ENST00000261798 TMC6Q7Z403 805 aa12.62□□□□□ -0.39
CSNK1A1-201ENST00000261798 ATF3P18847 181 aa12.62□□□□□ -0.39
CSNK1A1-201ENST00000261798 TTC39AQ5SRH9 613 aa12.62□□□□□ -0.39
CSNK1A1-201ENST00000261798 CDK5RAP3Q96JB5 506 aa12.62□□□□□ -0.39
CSNK1A1-201ENST00000261798 PLCD4Q9BRC7 762 aa12.62□□□□□ -0.39
CSNK1A1-201ENST00000261798 CCAR1Q8IX12 1150 aaKnown RBP12.62□□□□□ -0.39
CSNK1A1-201ENST00000261798 FSIP1Q8NA03 581 aa12.62□□□□□ -0.39
CSNK1A1-201ENST00000261798 SMARCC1Q92922 1105 aaPredicted RBP12.62□□□□□ -0.39
CSNK1A1-201ENST00000261798 DISP3Q9P2K9 1392 aa12.62□□□□□ -0.39
CSNK1A1-201ENST00000261798 CCDC69A6NI79 296 aa12.62□□□□□ -0.39
CSNK1A1-201ENST00000261798 USP48Q86UV5 1035 aa12.62□□□□□ -0.39
CSNK1A1-201ENST00000261798 U3KPZ7 1027 aaPredicted RBP12.62□□□□□ -0.39
CSNK1A1-201ENST00000261798 WASF1Q92558 559 aa12.62□□□□□ -0.39
CSNK1A1-201ENST00000261798 RBM42Q9BTD8 480 aaKnown RBP12.62□□□□□ -0.39
CSNK1A1-201ENST00000261798 PTPRCP08575 1304 aa12.61□□□□□ -0.39
CSNK1A1-201ENST00000261798 KIF20AO95235 890 aa12.61□□□□□ -0.39
CSNK1A1-201ENST00000261798 SKILP12757 684 aa12.61□□□□□ -0.39
CSNK1A1-201ENST00000261798 SDSP20132 328 aa12.61□□□□□ -0.39
CSNK1A1-201ENST00000261798 IMMTQ16891 758 aaKnown RBP12.61□□□□□ -0.39
CSNK1A1-201ENST00000261798 HMGB1P09429 215 aaKnown RBP12.61□□□□□ -0.39
CSNK1A1-201ENST00000261798 NUTM2GQ5VZR2 741 aa12.61□□□□□ -0.39
CSNK1A1-201ENST00000261798 SLC3A2P08195 630 aaKnown RBP12.61□□□□□ -0.39
CSNK1A1-201ENST00000261798 EIF5P55010 431 aaKnown RBP12.61□□□□□ -0.39
CSNK1A1-201ENST00000261798 NACAP1Q9BZK3 213 aa12.61□□□□□ -0.39
CSNK1A1-201ENST00000261798 RAD21O60216 631 aa12.61□□□□□ -0.39
CSNK1A1-201ENST00000261798 TUBB4AP04350 444 aa12.61□□□□□ -0.39
CSNK1A1-201ENST00000261798 DDX54Q8TDD1 881 aaKnown RBP12.61□□□□□ -0.39
CSNK1A1-201ENST00000261798 RRS1Q15050 365 aaKnown RBP12.61□□□□□ -0.39
CSNK1A1-201ENST00000261798 CDK13Q14004 1512 aaKnown RBP12.6□□□□□ -0.39
CSNK1A1-201ENST00000261798 TOPBP1Q92547 1522 aa12.6□□□□□ -0.39
CSNK1A1-201ENST00000261798 ZSCAN25Q6NSZ9 544 aa12.6□□□□□ -0.39
CSNK1A1-201ENST00000261798 SLC52A1Q9NWF4 448 aa12.6□□□□□ -0.39
CSNK1A1-201ENST00000261798 NLRP2Q9NX02 1062 aa12.6□□□□□ -0.39
CSNK1A1-201ENST00000261798 SLU7O95391 586 aaKnown RBP12.6□□□□□ -0.39
CSNK1A1-201ENST00000261798 STK11IPQ8N1F8 1099 aa12.6□□□□□ -0.39
CSNK1A1-201ENST00000261798 C8orf76Q96K31 380 aa12.6□□□□□ -0.39
CSNK1A1-201ENST00000261798 ARFGAP3Q9NP61 516 aa12.6□□□□□ -0.39
CSNK1A1-201ENST00000261798 TCEAL9Q9UHQ7 104 aa12.6□□□□□ -0.39
CSNK1A1-201ENST00000261798 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.6□□□□□ -0.396e-7■■■□□ 15.4
CSNK1A1-201ENST00000261798 FYB1O15117 783 aa12.6□□□□□ -0.39
CSNK1A1-201ENST00000261798 OGFRQ9NZT2 677 aa12.6□□□□□ -0.39
CSNK1A1-201ENST00000261798 ZNF397Q8NF99 534 aaPredicted RBP12.6□□□□□ -0.39
CSNK1A1-201ENST00000261798 CEP131Q9UPN4 1083 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms