RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 BCCIPQ9P287 314 aaKnown RBP eCLIP16.68■□□□□ 0.26
CUX2-201ENST00000261726 CEP131Q9UPN4 1083 aa16.68■□□□□ 0.26
CUX2-201ENST00000261726 UBE4AQ14139 1066 aa16.68■□□□□ 0.26
CUX2-201ENST00000261726 NUTM1Q86Y26 1132 aa16.68■□□□□ 0.26
CUX2-201ENST00000261726 TMCO3Q6UWJ1 677 aa16.68■□□□□ 0.26
CUX2-201ENST00000261726 PSMD1Q99460 953 aa16.68■□□□□ 0.26
CUX2-201ENST00000261726 IGHMBP2P38935 993 aaKnown RBP16.68■□□□□ 0.26
CUX2-201ENST00000261726 IMMTQ16891 758 aaKnown RBP16.68■□□□□ 0.26
CUX2-201ENST00000261726 GIMAP7Q8NHV1 300 aa16.68■□□□□ 0.26
CUX2-201ENST00000261726 RRBP1Q9P2E9 1410 aaKnown RBP16.68■□□□□ 0.26
CUX2-201ENST00000261726 MACROD2A1Z1Q3 448 aa16.67■□□□□ 0.26
CUX2-201ENST00000261726 TNNT1P13805 278 aa16.67■□□□□ 0.26
CUX2-201ENST00000261726 TNIP1Q15025 636 aa16.67■□□□□ 0.26
CUX2-201ENST00000261726 GSTTP1A0A1W2PQM5 241 aa16.67■□□□□ 0.26
CUX2-201ENST00000261726 UBXN4Q92575 508 aa16.67■□□□□ 0.26
CUX2-201ENST00000261726 CDK13Q14004 1512 aaKnown RBP16.67■□□□□ 0.26
CUX2-201ENST00000261726 EHBP1L1Q8N3D4 1523 aa16.67■□□□□ 0.26
CUX2-201ENST00000261726 PNISRQ8TF01 805 aaKnown RBP16.67■□□□□ 0.26
CUX2-201ENST00000261726 ZSCAN31Q96LW9 406 aaPredicted RBP16.67■□□□□ 0.26
CUX2-201ENST00000261726 PPP6R1Q9UPN7 881 aa16.67■□□□□ 0.26
CUX2-201ENST00000261726 PRKCSHP14314 528 aaPredicted RBP16.67■□□□□ 0.26
CUX2-201ENST00000261726 PIP4K2BP78356 416 aa16.67■□□□□ 0.26
CUX2-201ENST00000261726 TMOD2Q9NZR1 351 aa16.67■□□□□ 0.26
CUX2-201ENST00000261726 MINDY4BA8MYZ0 360 aa16.66■□□□□ 0.26
CUX2-201ENST00000261726 LIG1P18858 919 aa16.66■□□□□ 0.26
CUX2-201ENST00000261726 CACNA2D4Q7Z3S7 1137 aa16.66■□□□□ 0.26
CUX2-201ENST00000261726 POLR3DP05423 398 aaPredicted RBP16.66■□□□□ 0.26
CUX2-201ENST00000261726 CASQ1P31415 396 aa16.66■□□□□ 0.26
CUX2-201ENST00000261726 STAMBPO95630 424 aa16.66■□□□□ 0.26
CUX2-201ENST00000261726 PPP4R3AQ6IN85 833 aa16.66■□□□□ 0.26
CUX2-201ENST00000261726 CDK19Q9BWU1 502 aa16.66■□□□□ 0.26
CUX2-201ENST00000261726 SYCE3A1L190 88 aa16.66■□□□□ 0.26
CUX2-201ENST00000261726 OSCARQ8IYS5 282 aa16.66■□□□□ 0.26
CUX2-201ENST00000261726 MAP3K11Q16584 847 aa16.66■□□□□ 0.26
CUX2-201ENST00000261726 TICAM2Q86XR7 235 aa16.66■□□□□ 0.26
CUX2-201ENST00000261726 CRACR2BQ8N4Y2 399 aaPredicted RBP16.66■□□□□ 0.26
CUX2-201ENST00000261726 SHTN1A0MZ66 631 aa16.65■□□□□ 0.26
CUX2-201ENST00000261726 SPDYE4A6NLX3 237 aa16.65■□□□□ 0.26
CUX2-201ENST00000261726 IFFO1Q0D2I5 559 aa16.65■□□□□ 0.26
CUX2-201ENST00000261726 CEP63Q96MT8 703 aa16.65■□□□□ 0.26
CUX2-201ENST00000261726 FERMT3Q86UX7 667 aa16.65■□□□□ 0.26
CUX2-201ENST00000261726 TSG101Q99816 390 aa16.65■□□□□ 0.26
CUX2-201ENST00000261726 FKBP15Q5T1M5 1219 aa16.65■□□□□ 0.26
CUX2-201ENST00000261726 PDE3AQ14432 1141 aa16.65■□□□□ 0.26
CUX2-201ENST00000261726 PBRM1Q86U86 1689 aa16.64■□□□□ 0.26
CUX2-201ENST00000261726 GRIN2AQ12879 1464 aa16.64■□□□□ 0.25
CUX2-201ENST00000261726 KRT32Q14532 448 aa16.64■□□□□ 0.25
CUX2-201ENST00000261726 METTL24Q5JXM2 366 aa16.64■□□□□ 0.25
CUX2-201ENST00000261726 LUZP1Q86V48 1076 aa16.64■□□□□ 0.25
CUX2-201ENST00000261726 CCDC83Q8IWF9 413 aa16.64■□□□□ 0.25
CUX2-201ENST00000261726 SYNJ2O15056 1496 aa16.64■□□□□ 0.25
CUX2-201ENST00000261726 CABP1Q9NZU7 370 aa16.64■□□□□ 0.25
CUX2-201ENST00000261726 COMMD10Q9Y6G5 202 aa16.64■□□□□ 0.25
CUX2-201ENST00000261726 WDR78Q5VTH9 848 aa16.64■□□□□ 0.25
CUX2-201ENST00000261726 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.64■□□□□ 0.25
CUX2-201ENST00000261726 DNAI2Q9GZS0 605 aa16.64■□□□□ 0.25
CUX2-201ENST00000261726 XPCQ01831 940 aaPredicted RBP16.64■□□□□ 0.25
CUX2-201ENST00000261726 MKNK2Q9HBH9 465 aa16.64■□□□□ 0.25
CUX2-201ENST00000261726 PDCL2Q8N4E4 241 aa16.63■□□□□ 0.25
CUX2-201ENST00000261726 RRS1Q15050 365 aaKnown RBP16.63■□□□□ 0.25
CUX2-201ENST00000261726 LARP1Q6PKG0 1096 aaKnown RBP16.63■□□□□ 0.25
CUX2-201ENST00000261726 ATF7IPQ6VMQ6 1270 aa16.63■□□□□ 0.25
CUX2-201ENST00000261726 MVPQ14764 893 aaKnown RBP16.63■□□□□ 0.25
CUX2-201ENST00000261726 KIAA0586Q9BVV6 1533 aa16.62■□□□□ 0.25
CUX2-201ENST00000261726 GUCY1B3Q02153 619 aa16.62■□□□□ 0.25
CUX2-201ENST00000261726 CCDC82Q8N4S0 544 aa16.62■□□□□ 0.25
CUX2-201ENST00000261726 SLC12A5Q9H2X9 1139 aa16.62■□□□□ 0.25
CUX2-201ENST00000261726 PODXL2Q9NZ53 605 aa16.62■□□□□ 0.25
CUX2-201ENST00000261726 TRMT1LQ7Z2T5 733 aaKnown RBP16.62■□□□□ 0.25
CUX2-201ENST00000261726 KIF5CO60282 957 aa16.62■□□□□ 0.25
CUX2-201ENST00000261726 CCDC96Q2M329 555 aa16.62■□□□□ 0.25
CUX2-201ENST00000261726 RNF187Q5TA31 235 aaPredicted RBP16.61■□□□□ 0.25
CUX2-201ENST00000261726 TMEM87AQ8NBN3 555 aa16.61■□□□□ 0.25
CUX2-201ENST00000261726 TTC16Q8NEE8 873 aa16.61■□□□□ 0.25
CUX2-201ENST00000261726 AKNAQ7Z591 1439 aa16.61■□□□□ 0.25
CUX2-201ENST00000261726 KIF4BQ2VIQ3 1234 aa16.61■□□□□ 0.25
CUX2-201ENST00000261726 PTPN14Q15678 1187 aa16.61■□□□□ 0.25
CUX2-201ENST00000261726 CPLX3Q8WVH0 158 aa16.61■□□□□ 0.25
CUX2-201ENST00000261726 URI1O94763 535 aaPredicted RBP16.61■□□□□ 0.25
CUX2-201ENST00000261726 CTNNA2P26232 953 aa16.61■□□□□ 0.25
CUX2-201ENST00000261726 SFPQP23246 707 aaKnown RBP eCLIP16.6■□□□□ 0.25
CUX2-201ENST00000261726 PAXIP1Q6ZW49 1069 aaPredicted RBP16.6■□□□□ 0.25
CUX2-201ENST00000261726 HOOK3Q86VS8 718 aa16.6■□□□□ 0.25
CUX2-201ENST00000261726 PRDM10Q9NQV6 1147 aa16.6■□□□□ 0.25
CUX2-201ENST00000261726 MIS18AQ9NYP9 233 aa16.6■□□□□ 0.25
CUX2-201ENST00000261726 MAGI1Q96QZ7 1491 aaPredicted RBP16.6■□□□□ 0.25
CUX2-201ENST00000261726 CCDC150Q8NCX0 1101 aa16.6■□□□□ 0.25
CUX2-201ENST00000261726 GBP3Q9H0R5 595 aa16.6■□□□□ 0.25
CUX2-201ENST00000261726 TTLL12Q14166 644 aaPredicted RBP16.6■□□□□ 0.25
CUX2-201ENST00000261726 NUP88Q99567 741 aaPredicted RBP16.6■□□□□ 0.25
CUX2-201ENST00000261726 PRDM11Q9NQV5 511 aa16.6■□□□□ 0.25
CUX2-201ENST00000261726 TDRD12Q587J7 1177 aaKnown RBP16.6■□□□□ 0.25
CUX2-201ENST00000261726 PRPF40BQ6NWY9 871 aaKnown RBP16.6■□□□□ 0.25
CUX2-201ENST00000261726 PUS7Q96PZ0 661 aaKnown RBP16.59■□□□□ 0.25
CUX2-201ENST00000261726 ANKIB1Q9P2G1 1089 aa16.59■□□□□ 0.25
CUX2-201ENST00000261726 EXOC6BQ9Y2D4 811 aa16.59■□□□□ 0.25
CUX2-201ENST00000261726 VPS36Q86VN1 386 aa16.59■□□□□ 0.25
CUX2-201ENST00000261726 CBX1P83916 185 aa16.59■□□□□ 0.25
CUX2-201ENST00000261726 GCOM1H8Y6P7 765 aaPredicted RBP16.59■□□□□ 0.25
CUX2-201ENST00000261726 ZSCAN12O43309 604 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms