RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 SPATA24Q86W54 205 aa11.95□□□□□ -0.5
TRPM1-201ENST00000256552 SCAND2PQ9GZW5 306 aaPredicted RBP11.95□□□□□ -0.5
TRPM1-201ENST00000256552 TMCO5BA8MYB1 307 aa11.95□□□□□ -0.5
TRPM1-201ENST00000256552 SMARCA5O60264 1052 aaPredicted RBP11.95□□□□□ -0.5
TRPM1-201ENST00000256552 KDM4AO75164 1064 aa11.95□□□□□ -0.5
TRPM1-201ENST00000256552 MX1P20591 662 aa11.95□□□□□ -0.5
TRPM1-201ENST00000256552 NFXL1Q6ZNB6 911 aa11.95□□□□□ -0.5
TRPM1-201ENST00000256552 CEP120Q8N960 986 aa11.95□□□□□ -0.5
TRPM1-201ENST00000256552 SKILP12757 684 aa11.94□□□□□ -0.5
TRPM1-201ENST00000256552 PRKAR2BP31323 418 aa11.94□□□□□ -0.5
TRPM1-201ENST00000256552 AMPHP49418 695 aa11.94□□□□□ -0.5
TRPM1-201ENST00000256552 PTGS1P23219 599 aa11.94□□□□□ -0.5
TRPM1-201ENST00000256552 TRDNQ13061 729 aa11.94□□□□□ -0.5
TRPM1-201ENST00000256552 IQCEQ6IPM2 695 aa11.94□□□□□ -0.5
TRPM1-201ENST00000256552 SUDS3Q9H7L9 328 aaPredicted RBP11.94□□□□□ -0.5
TRPM1-201ENST00000256552 EFCAB2Q5VUJ9 269 aa11.94□□□□□ -0.5
TRPM1-201ENST00000256552 CCDC181Q5TID7 509 aa11.94□□□□□ -0.5
TRPM1-201ENST00000256552 TMC6Q7Z403 805 aa11.94□□□□□ -0.5
TRPM1-201ENST00000256552 ERBB4Q15303 1308 aa11.94□□□□□ -0.5
TRPM1-201ENST00000256552 TRIM27P14373 513 aa11.94□□□□□ -0.5
TRPM1-201ENST00000256552 CAPN2P17655 700 aa11.94□□□□□ -0.5
TRPM1-201ENST00000256552 KIF4BQ2VIQ3 1234 aa11.94□□□□□ -0.5
TRPM1-201ENST00000256552 LRRFIP1Q32MZ4 808 aaKnown RBP11.93□□□□□ -0.5
TRPM1-201ENST00000256552 MAP9Q49MG5 647 aa11.93□□□□□ -0.5
TRPM1-201ENST00000256552 AP1ARQ63HQ0 302 aa11.93□□□□□ -0.5
TRPM1-201ENST00000256552 ARFGAP3Q9NP61 516 aa11.93□□□□□ -0.5
TRPM1-201ENST00000256552 DDX19AQ9NUU7 478 aaKnown RBP11.93□□□□□ -0.5
TRPM1-201ENST00000256552 ZNF330Q9Y3S2 320 aaPredicted RBP11.93□□□□□ -0.5
TRPM1-201ENST00000256552 SYNJ1O43426 1573 aa11.93□□□□□ -0.5
TRPM1-201ENST00000256552 STX6O43752 255 aa11.93□□□□□ -0.5
TRPM1-201ENST00000256552 MICALCLQ6ZW33 695 aa11.93□□□□□ -0.5
TRPM1-201ENST00000256552 TMX3Q96JJ7 454 aa11.93□□□□□ -0.5
TRPM1-201ENST00000256552 MINK1Q8N4C8 1332 aaPredicted RBP11.93□□□□□ -0.5
TRPM1-201ENST00000256552 ZNF445P59923 1031 aa11.93□□□□□ -0.5
TRPM1-201ENST00000256552 CWC27Q6UX04 472 aaKnown RBP11.93□□□□□ -0.5
TRPM1-201ENST00000256552 RPAP2Q8IXW5 612 aaPredicted RBP11.93□□□□□ -0.5
TRPM1-201ENST00000256552 LTV1Q96GA3 475 aaPredicted RBP11.93□□□□□ -0.5
TRPM1-201ENST00000256552 CARMIL2Q6F5E8 1435 aa11.93□□□□□ -0.5
TRPM1-201ENST00000256552 KIF5CO60282 957 aa11.93□□□□□ -0.5
TRPM1-201ENST00000256552 NCAPGQ9BPX3 1015 aa11.93□□□□□ -0.5
TRPM1-201ENST00000256552 POTEB2H3BUK9 544 aa11.92□□□□□ -0.5
TRPM1-201ENST00000256552 FAM200AQ8TCP9 573 aa11.92□□□□□ -0.5
TRPM1-201ENST00000256552 CNPY2Q9Y2B0 182 aa11.92□□□□□ -0.5
TRPM1-201ENST00000256552 A0A1B0GUA9 196 aa11.92□□□□□ -0.5
TRPM1-201ENST00000256552 EPB41L2O43491 1005 aaKnown RBP11.92□□□□□ -0.5
TRPM1-201ENST00000256552 BLOC1S2Q6QNY1 142 aa11.92□□□□□ -0.5
TRPM1-201ENST00000256552 SRCIN1Q9C0H9 1055 aa11.92□□□□□ -0.5
TRPM1-201ENST00000256552 ZSWIM4Q9H7M6 989 aa11.92□□□□□ -0.5
TRPM1-201ENST00000256552 DACH1Q9UI36 760 aa11.92□□□□□ -0.5
TRPM1-201ENST00000256552 CCDC148Q8NFR7 591 aa11.92□□□□□ -0.5
TRPM1-201ENST00000256552 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRPM1-201ENST00000256552 HIP1O00291 1037 aa11.92□□□□□ -0.5
TRPM1-201ENST00000256552 TOP1P11387 765 aaKnown RBP11.92□□□□□ -0.5
TRPM1-201ENST00000256552 LARP6Q9BRS8 491 aaKnown RBP11.92□□□□□ -0.5
TRPM1-201ENST00000256552 JRKLQ9Y4A0 524 aa11.92□□□□□ -0.5
TRPM1-201ENST00000256552 ANKRD30BQ9BXX2 1392 aa11.92□□□□□ -0.5
TRPM1-201ENST00000256552 NUCB1Q02818 461 aa11.91□□□□□ -0.5
TRPM1-201ENST00000256552 SEPT7Q16181 437 aaKnown RBP11.91□□□□□ -0.5
TRPM1-201ENST00000256552 RALYLQ86SE5 291 aaKnown RBP11.91□□□□□ -0.5
TRPM1-201ENST00000256552 NEBLO76041 1014 aa11.91□□□□□ -0.5
TRPM1-201ENST00000256552 HDAC1Q13547 482 aaPredicted RBP11.91□□□□□ -0.5
TRPM1-201ENST00000256552 JMYQ8N9B5 988 aa11.91□□□□□ -0.5
TRPM1-201ENST00000256552 PRXQ9BXM0 1461 aa11.91□□□□□ -0.5
TRPM1-201ENST00000256552 PIP4K2AP48426 406 aaPredicted RBP11.91□□□□□ -0.5
TRPM1-201ENST00000256552 ANO6Q4KMQ2 910 aa11.91□□□□□ -0.5
TRPM1-201ENST00000256552 MCM6Q14566 821 aa11.91□□□□□ -0.5
TRPM1-201ENST00000256552 DNAI1Q9UI46 699 aa11.91□□□□□ -0.5
TRPM1-201ENST00000256552 GBP2P32456 591 aaPredicted RBP11.91□□□□□ -0.5
TRPM1-201ENST00000256552 ENOX2Q16206 610 aaKnown RBP11.91□□□□□ -0.5
TRPM1-201ENST00000256552 GAS2L3Q86XJ1 694 aa11.91□□□□□ -0.5
TRPM1-201ENST00000256552 ZNHIT6Q9NWK9 470 aaKnown RBP11.91□□□□□ -0.5
TRPM1-201ENST00000256552 RBM33Q96EV2 1170 aaKnown RBP11.9□□□□□ -0.5
TRPM1-201ENST00000256552 POLA1P09884 1462 aaPredicted RBP11.9□□□□□ -0.5
TRPM1-201ENST00000256552 SLC4A2P04920 1241 aa11.9□□□□□ -0.5
TRPM1-201ENST00000256552 ATP2B1P20020 1258 aa11.9□□□□□ -0.5
TRPM1-201ENST00000256552 SATB1Q01826 763 aa11.9□□□□□ -0.5
TRPM1-201ENST00000256552 STX1AQ16623 288 aa11.9□□□□□ -0.5
TRPM1-201ENST00000256552 VPS53Q5VIR6 699 aa11.9□□□□□ -0.5
TRPM1-201ENST00000256552 LIMCH1Q9UPQ0 1083 aa11.9□□□□□ -0.5
TRPM1-201ENST00000256552 PPP2R5AQ15172 486 aa11.9□□□□□ -0.5
TRPM1-201ENST00000256552 MCM3P25205 808 aa11.9□□□□□ -0.51
TRPM1-201ENST00000256552 GNG11P61952 73 aa11.9□□□□□ -0.51
TRPM1-201ENST00000256552 GOLGA6L10A0A0M3HER8 536 aa11.89□□□□□ -0.51
TRPM1-201ENST00000256552 CTAGE5O15320 804 aa11.89□□□□□ -0.51
TRPM1-201ENST00000256552 ZSCAN26Q16670 478 aa11.89□□□□□ -0.51
TRPM1-201ENST00000256552 ZGPATQ8N5A5 531 aaKnown RBP11.89□□□□□ -0.51
TRPM1-201ENST00000256552 CCDC150Q8NCX0 1101 aa11.89□□□□□ -0.51
TRPM1-201ENST00000256552 TFIP11Q9UBB9 837 aaKnown RBP11.89□□□□□ -0.51
TRPM1-201ENST00000256552 GPRASP1Q5JY77 1395 aa11.89□□□□□ -0.51
TRPM1-201ENST00000256552 GJB2P29033 226 aa11.89□□□□□ -0.51
TRPM1-201ENST00000256552 CABP2Q9NPB3 220 aa11.89□□□□□ -0.51
TRPM1-201ENST00000256552 VPS18Q9P253 973 aa11.89□□□□□ -0.51
TRPM1-201ENST00000256552 ZSCAN22P10073 491 aaPredicted RBP11.89□□□□□ -0.51
TRPM1-201ENST00000256552 IL1RAPL2Q9NP60 686 aa11.89□□□□□ -0.51
TRPM1-201ENST00000256552 LUC7LQ9NQ29 371 aaKnown RBP11.89□□□□□ -0.51
TRPM1-201ENST00000256552 ATP2B3Q16720 1220 aa11.88□□□□□ -0.51
TRPM1-201ENST00000256552 EXOC6BQ9Y2D4 811 aa11.88□□□□□ -0.51
TRPM1-201ENST00000256552 CCT4P50991 539 aaKnown RBP11.88□□□□□ -0.51
TRPM1-201ENST00000256552 ERO1AQ96HE7 468 aa11.88□□□□□ -0.51
TRPM1-201ENST00000256552 SLC12A5Q9H2X9 1139 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms