RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 ATP6V1AP38606 617 aa5.29□□□□□ -1.56
RBM39-201ENST00000253363 SEMA3FQ13275 785 aa5.29□□□□□ -1.56
RBM39-201ENST00000253363 SLF2Q8IX21 1173 aa5.29□□□□□ -1.56
RBM39-201ENST00000253363 DEPDC4Q8N2C3 294 aa5.29□□□□□ -1.56
RBM39-201ENST00000253363 SCUBE2Q9NQ36 999 aa5.29□□□□□ -1.56
RBM39-201ENST00000253363 SPHKAPQ2M3C7 1700 aa5.29□□□□□ -1.56
RBM39-201ENST00000253363 FAM98CQ17RN3 349 aaKnown RBP5.29□□□□□ -1.56
RBM39-201ENST00000253363 BLOC1S3Q6QNY0 202 aa5.29□□□□□ -1.56
RBM39-201ENST00000253363 ZMIZ1Q9ULJ6 1067 aa5.29□□□□□ -1.56
RBM39-201ENST00000253363 VARS2Q5ST30 1063 aaKnown RBP5.28□□□□□ -1.56
RBM39-201ENST00000253363 EID1Q9Y6B2 187 aa5.28□□□□□ -1.56
RBM39-201ENST00000253363 TMEM2Q9UHN6 1383 aa5.28□□□□□ -1.56
RBM39-201ENST00000253363 PLEKHG1Q9ULL1 1385 aa5.28□□□□□ -1.56
RBM39-201ENST00000253363 SETBP1Q9Y6X0 1596 aa5.28□□□□□ -1.56
RBM39-201ENST00000253363 BRD2P25440 801 aaKnown RBP5.28□□□□□ -1.56
RBM39-201ENST00000253363 SCNN1AP37088 669 aa5.28□□□□□ -1.56
RBM39-201ENST00000253363 MAP10Q9P2G4 905 aa5.28□□□□□ -1.56
RBM39-201ENST00000253363 TMEM131LA2VDJ0 1609 aa5.27□□□□□ -1.57
RBM39-201ENST00000253363 E9PCH4 1651 aa5.27□□□□□ -1.57
RBM39-201ENST00000253363 KCNA1Q09470 495 aa5.27□□□□□ -1.57
RBM39-201ENST00000253363 MORN1Q5T089 497 aa5.27□□□□□ -1.57
RBM39-201ENST00000253363 RETREG3Q86VR2 466 aa5.27□□□□□ -1.57
RBM39-201ENST00000253363 VRTNQ9H8Y1 702 aa5.27□□□□□ -1.57
RBM39-201ENST00000253363 ATG7O95352 703 aa5.26□□□□□ -1.57
RBM39-201ENST00000253363 TMEM164Q5U3C3 297 aa5.26□□□□□ -1.57
RBM39-201ENST00000253363 ZFYVE9O95405 1425 aa5.26□□□□□ -1.57
RBM39-201ENST00000253363 DCCP43146 1447 aa5.26□□□□□ -1.57
RBM39-201ENST00000253363 LAMC1P11047 1609 aa5.26□□□□□ -1.57
RBM39-201ENST00000253363 ATP9BO43861 1147 aa5.26□□□□□ -1.57
RBM39-201ENST00000253363 HMGB1P09429 215 aaKnown RBP5.26□□□□□ -1.57
RBM39-201ENST00000253363 CCDC27Q2M243 656 aa5.26□□□□□ -1.57
RBM39-201ENST00000253363 GRIPAP1Q4V328 841 aa5.26□□□□□ -1.57
RBM39-201ENST00000253363 FAM174AQ8TBP5 190 aa5.26□□□□□ -1.57
RBM39-201ENST00000253363 ZFRQ96KR1 1074 aaKnown RBP5.26□□□□□ -1.57
RBM39-201ENST00000253363 VPS9D1Q9Y2B5 631 aa5.26□□□□□ -1.57
RBM39-201ENST00000253363 ARHGAP33O14559 1287 aa5.25□□□□□ -1.57
RBM39-201ENST00000253363 CRTC2Q53ET0 693 aaPredicted RBP5.25□□□□□ -1.57
RBM39-201ENST00000253363 PHLDB3Q6NSJ2 640 aa5.25□□□□□ -1.57
RBM39-201ENST00000253363 NAIPQ13075 1403 aa5.25□□□□□ -1.57
RBM39-201ENST00000253363 RPGRIP1LQ68CZ1 1315 aa5.25□□□□□ -1.57
RBM39-201ENST00000253363 CEBPAP49715 358 aaPredicted RBP5.25□□□□□ -1.57
RBM39-201ENST00000253363 PDE4CQ08493 712 aa5.25□□□□□ -1.57
RBM39-201ENST00000253363 FAM50AQ14320 339 aaKnown RBP5.25□□□□□ -1.57
RBM39-201ENST00000253363 SND1Q7KZF4 910 aaKnown RBP eCLIP5.25□□□□□ -1.57
RBM39-201ENST00000253363 MARVELD3Q96A59 401 aa5.25□□□□□ -1.57
RBM39-201ENST00000253363 SLAIN2Q9P270 581 aa5.25□□□□□ -1.57
RBM39-201ENST00000253363 USP17L3A6NCW0 530 aa5.24□□□□□ -1.57
RBM39-201ENST00000253363 USP17L4A6NCW7 530 aa5.24□□□□□ -1.57
RBM39-201ENST00000253363 USP17L2Q6R6M4 530 aa5.24□□□□□ -1.57
RBM39-201ENST00000253363 USP17L1Q7RTZ2 530 aa5.24□□□□□ -1.57
RBM39-201ENST00000253363 ALKQ9UM73 1620 aa5.24□□□□□ -1.57
RBM39-201ENST00000253363 RIMS2Q9UQ26 1411 aa5.24□□□□□ -1.57
RBM39-201ENST00000253363 HSPA2P54652 639 aa5.24□□□□□ -1.57
RBM39-201ENST00000253363 EIF4G2P78344 907 aaKnown RBP eCLIP5.24□□□□□ -1.57
RBM39-201ENST00000253363 RRP7BPQ9NSQ0 103 aa5.24□□□□□ -1.57
RBM39-201ENST00000253363 KIF1BO60333 1816 aa5.24□□□□□ -1.57
RBM39-201ENST00000253363 LYPD8Q6UX82 237 aa5.23□□□□□ -1.57
RBM39-201ENST00000253363 STAC3Q96MF2 364 aa5.23□□□□□ -1.57
RBM39-201ENST00000253363 XRN1Q8IZH2 1706 aaKnown RBP5.23□□□□□ -1.57
RBM39-201ENST00000253363 ERBB3P21860 1342 aa5.23□□□□□ -1.57
RBM39-201ENST00000253363 USP17L5A8MUK1 530 aa5.23□□□□□ -1.57
RBM39-201ENST00000253363 SOX11P35716 441 aa5.23□□□□□ -1.57
RBM39-201ENST00000253363 KCNH2Q12809 1159 aa5.23□□□□□ -1.57
RBM39-201ENST00000253363 NR1H3Q13133 447 aa5.23□□□□□ -1.57
RBM39-201ENST00000253363 PUS7Q96PZ0 661 aaKnown RBP5.23□□□□□ -1.57
RBM39-201ENST00000253363 FKBPLQ9UIM3 349 aa5.23□□□□□ -1.57
RBM39-201ENST00000253363 LRRC7Q96NW7 1537 aa5.23□□□□□ -1.57
RBM39-201ENST00000253363 PTCH1Q13635 1447 aa5.23□□□□□ -1.57
RBM39-201ENST00000253363 NUP155O75694 1391 aa5.23□□□□□ -1.57
RBM39-201ENST00000253363 ZBBXA8MT70 800 aa5.22□□□□□ -1.57
RBM39-201ENST00000253363 TOM1O60784 492 aa5.22□□□□□ -1.57
RBM39-201ENST00000253363 SKIP12755 728 aa5.22□□□□□ -1.57
RBM39-201ENST00000253363 NCOA4Q13772 614 aa5.22□□□□□ -1.57
RBM39-201ENST00000253363 OCSTAMPQ9BR26 566 aa5.22□□□□□ -1.57
RBM39-201ENST00000253363 KNDC1Q76NI1 1749 aa5.22□□□□□ -1.57
RBM39-201ENST00000253363 MYOM2P54296 1465 aa5.22□□□□□ -1.57
RBM39-201ENST00000253363 BHMG1C9JSJ3 638 aaPredicted RBP5.22□□□□□ -1.57
RBM39-201ENST00000253363 F12P00748 615 aaPredicted RBP5.22□□□□□ -1.57
RBM39-201ENST00000253363 SLC4A3P48751 1232 aa5.22□□□□□ -1.57
RBM39-201ENST00000253363 DESI1Q6ICB0 168 aa5.22□□□□□ -1.57
RBM39-201ENST00000253363 USB1Q9BQ65 265 aaKnown RBP5.22□□□□□ -1.57
RBM39-201ENST00000253363 NOVA2Q9UNW9 492 aaKnown RBP5.22□□□□□ -1.57
RBM39-201ENST00000253363 NEXMIFQ5QGS0 1516 aa5.22□□□□□ -1.57
RBM39-201ENST00000253363 CLTCL1P53675 1640 aa5.21□□□□□ -1.57
RBM39-201ENST00000253363 APLP1P51693 650 aa5.21□□□□□ -1.57
RBM39-201ENST00000253363 SCUBE3Q8IX30 993 aa5.21□□□□□ -1.57
RBM39-201ENST00000253363 TBX22Q9Y458 520 aa5.21□□□□□ -1.57
RBM39-201ENST00000253363 ANKRD30BQ9BXX2 1392 aa5.21□□□□□ -1.58
RBM39-201ENST00000253363 FAM135BQ49AJ0 1406 aa5.21□□□□□ -1.58
RBM39-201ENST00000253363 ACTN4O43707 911 aaKnown RBP5.21□□□□□ -1.58
RBM39-201ENST00000253363 KCNA6P17658 529 aa5.21□□□□□ -1.58
RBM39-201ENST00000253363 TSGA10IPQ3SY00 556 aa5.21□□□□□ -1.58
RBM39-201ENST00000253363 PRDM9Q9NQV7 894 aa5.21□□□□□ -1.58
RBM39-201ENST00000253363 CHD2O14647 1828 aaKnown RBP5.21□□□□□ -1.58
RBM39-201ENST00000253363 SERPINB4P48594 390 aa5.2□□□□□ -1.58
RBM39-201ENST00000253363 KMT5BQ4FZB7 885 aa5.2□□□□□ -1.58
RBM39-201ENST00000253363 OTUD5Q96G74 571 aa5.2□□□□□ -1.58
RBM39-201ENST00000253363 ZNF594Q96JF6 807 aaPredicted RBP5.2□□□□□ -1.58
RBM39-201ENST00000253363 POLR3GLQ9BT43 218 aa5.2□□□□□ -1.58
RBM39-201ENST00000253363 SLC4A5Q9BY07 1137 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms