RNA–Protein interactions for RNA: ENST00000025008.9

RB1CC1-201, Transcript of RB1 inducible coiled-coil 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RB1CC1, Length 6,635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-201ENST00000025008 SOGA3Q5TF21 947 aa18.57■□□□□ 0.56
RB1CC1-201ENST00000025008 RAD54L2Q9Y4B4 1467 aa18.57■□□□□ 0.56
RB1CC1-201ENST00000025008 ATAD2Q6PL18 1390 aa18.56■□□□□ 0.56
RB1CC1-201ENST00000025008 TIAM1Q13009 1591 aa18.56■□□□□ 0.56
RB1CC1-201ENST00000025008 DYDC1Q8WWB3 177 aa18.56■□□□□ 0.56
RB1CC1-201ENST00000025008 NUTM1Q86Y26 1132 aa18.56■□□□□ 0.56
RB1CC1-201ENST00000025008 STK11IPQ8N1F8 1099 aa18.56■□□□□ 0.56
RB1CC1-201ENST00000025008 GPRASP1Q5JY77 1395 aa18.56■□□□□ 0.56
RB1CC1-201ENST00000025008 SMARCC1Q92922 1105 aaPredicted RBP18.56■□□□□ 0.56
RB1CC1-201ENST00000025008 UBAC1Q9BSL1 405 aa18.56■□□□□ 0.56
RB1CC1-201ENST00000025008 CABP1Q9NZU7 370 aa18.56■□□□□ 0.56
RB1CC1-201ENST00000025008 TIGD1Q96MW7 591 aa18.55■□□□□ 0.56
RB1CC1-201ENST00000025008 XRCC6P12956 609 aaKnown RBP eCLIP18.55■□□□□ 0.56
RB1CC1-201ENST00000025008 SAMD1Q6SPF0 538 aaPredicted RBP18.55■□□□□ 0.56
RB1CC1-201ENST00000025008 KRT222Q8N1A0 295 aa18.55■□□□□ 0.56
RB1CC1-201ENST00000025008 ABTB2Q8N961 1025 aa18.55■□□□□ 0.56
RB1CC1-201ENST00000025008 SLC26A8Q96RN1 970 aa18.55■□□□□ 0.56
RB1CC1-201ENST00000025008 TRMT1Q9NXH9 659 aaKnown RBP18.55■□□□□ 0.56
RB1CC1-201ENST00000025008 U3KPZ7 1027 aaPredicted RBP18.55■□□□□ 0.56
RB1CC1-201ENST00000025008 CKAP2LQ8IYA6 745 aa18.55■□□□□ 0.56
RB1CC1-201ENST00000025008 ARHGAP5Q13017 1502 aa18.55■□□□□ 0.56
RB1CC1-201ENST00000025008 LRSAM1Q6UWE0 723 aa18.55■□□□□ 0.56
RB1CC1-201ENST00000025008 ZHX3Q9H4I2 956 aa18.54■□□□□ 0.56
RB1CC1-201ENST00000025008 ZSCAN23Q3MJ62 389 aa18.54■□□□□ 0.56
RB1CC1-201ENST00000025008 SNW1Q13573 536 aaKnown RBP18.54■□□□□ 0.56
RB1CC1-201ENST00000025008 STX1AQ16623 288 aa18.54■□□□□ 0.56
RB1CC1-201ENST00000025008 CEP126Q9P2H0 1117 aa18.54■□□□□ 0.56
RB1CC1-201ENST00000025008 CDK19Q9BWU1 502 aa18.54■□□□□ 0.56
RB1CC1-201ENST00000025008 PRDM2Q13029 1718 aa18.53■□□□□ 0.56
RB1CC1-201ENST00000025008 UBE2HP62256 183 aa18.53■□□□□ 0.56
RB1CC1-201ENST00000025008 FKBP4Q02790 459 aaKnown RBP eCLIP18.53■□□□□ 0.56
RB1CC1-201ENST00000025008 CNKSR2Q8WXI2 1034 aa18.53■□□□□ 0.56
RB1CC1-201ENST00000025008 NSD3Q9BZ95 1437 aa18.53■□□□□ 0.56
RB1CC1-201ENST00000025008 TRERF1Q96PN7 1200 aa18.53■□□□□ 0.56
RB1CC1-201ENST00000025008 HMGB1P09429 215 aaKnown RBP18.53■□□□□ 0.56
RB1CC1-201ENST00000025008 CCDC171Q6TFL3 1326 aa18.53■□□□□ 0.56
RB1CC1-201ENST00000025008 DUSP27Q5VZP5 1158 aa18.53■□□□□ 0.56
RB1CC1-201ENST00000025008 GBP2P32456 591 aaPredicted RBP18.52■□□□□ 0.56
RB1CC1-201ENST00000025008 PAFAH1B1P43034 410 aa18.52■□□□□ 0.56
RB1CC1-201ENST00000025008 ZNF165P49910 485 aa18.52■□□□□ 0.56
RB1CC1-201ENST00000025008 CEP135Q66GS9 1140 aa18.52■□□□□ 0.56
RB1CC1-201ENST00000025008 SPDYE4A6NLX3 237 aa18.52■□□□□ 0.56
RB1CC1-201ENST00000025008 MAP2K1Q02750 393 aaPredicted RBP18.52■□□□□ 0.56
RB1CC1-201ENST00000025008 ZNF530Q6P9A1 599 aaPredicted RBP18.52■□□□□ 0.56
RB1CC1-201ENST00000025008 STX6O43752 255 aa18.52■□□□□ 0.55
RB1CC1-201ENST00000025008 NAIPQ13075 1403 aa18.52■□□□□ 0.55
RB1CC1-201ENST00000025008 TBC1D9Q6ZT07 1266 aa18.51■□□□□ 0.55
RB1CC1-201ENST00000025008 CCDC150Q8NCX0 1101 aa18.51■□□□□ 0.55
RB1CC1-201ENST00000025008 SMARCA5O60264 1052 aaPredicted RBP18.51■□□□□ 0.55
RB1CC1-201ENST00000025008 FKBP15Q5T1M5 1219 aa18.51■□□□□ 0.55
RB1CC1-201ENST00000025008 C8orf76Q96K31 380 aa18.51■□□□□ 0.55
RB1CC1-201ENST00000025008 DAPK1P53355 1430 aa18.51■□□□□ 0.55
RB1CC1-201ENST00000025008 TDO2P48775 406 aa18.5■□□□□ 0.55
RB1CC1-201ENST00000025008 ZKSCAN5Q9Y2L8 839 aa18.5■□□□□ 0.55
RB1CC1-201ENST00000025008 PRXQ9BXM0 1461 aa18.5■□□□□ 0.55
RB1CC1-201ENST00000025008 USO1O60763 962 aaKnown RBP18.5■□□□□ 0.55
RB1CC1-201ENST00000025008 LUZP1Q86V48 1076 aa18.5■□□□□ 0.55
RB1CC1-201ENST00000025008 TATP17735 454 aaPredicted RBP18.5■□□□□ 0.55
RB1CC1-201ENST00000025008 NOLC1Q14978 699 aaKnown RBP eCLIP18.5■□□□□ 0.55
RB1CC1-201ENST00000025008 LMAN1P49257 510 aa18.49■□□□□ 0.55
RB1CC1-201ENST00000025008 HS1BP3Q53T59 392 aa18.49■□□□□ 0.55
RB1CC1-201ENST00000025008 TMC6Q7Z403 805 aa18.49■□□□□ 0.55
RB1CC1-201ENST00000025008 DHX37Q8IY37 1157 aaKnown RBP18.49■□□□□ 0.55
RB1CC1-201ENST00000025008 AFAP1Q8N556 730 aa18.49■□□□□ 0.55
RB1CC1-201ENST00000025008 NCOA1Q15788 1441 aa18.49■□□□□ 0.55
RB1CC1-201ENST00000025008 YEATS4O95619 227 aa18.49■□□□□ 0.55
RB1CC1-201ENST00000025008 SEPT11Q9NVA2 429 aaKnown RBP18.49■□□□□ 0.55
RB1CC1-201ENST00000025008 PHAXQ9H814 394 aaKnown RBP18.49■□□□□ 0.55
RB1CC1-201ENST00000025008 GDPD2Q9HCC8 539 aa18.49■□□□□ 0.55
RB1CC1-201ENST00000025008 FSIP1Q8NA03 581 aa18.49■□□□□ 0.55
RB1CC1-201ENST00000025008 RPGRIP1LQ68CZ1 1315 aa18.49■□□□□ 0.55
RB1CC1-201ENST00000025008 RBM27Q9P2N5 1060 aaKnown RBP18.49■□□□□ 0.55
RB1CC1-201ENST00000025008 SSBP05455 408 aaKnown RBP eCLIP18.48■□□□□ 0.55
RB1CC1-201ENST00000025008 RNF187Q5TA31 235 aaPredicted RBP18.48■□□□□ 0.55
RB1CC1-201ENST00000025008 RAI14Q9P0K7 980 aa18.48■□□□□ 0.55
RB1CC1-201ENST00000025008 TRIM27P14373 513 aa18.48■□□□□ 0.55
RB1CC1-201ENST00000025008 SMC1AQ14683 1233 aaKnown RBP18.48■□□□□ 0.55
RB1CC1-201ENST00000025008 KLHL10Q6JEL2 608 aa18.48■□□□□ 0.55
RB1CC1-201ENST00000025008 HCLS1P14317 486 aaPredicted RBP18.47■□□□□ 0.55
RB1CC1-201ENST00000025008 IFFO1Q0D2I5 559 aa18.47■□□□□ 0.55
RB1CC1-201ENST00000025008 CTR9Q6PD62 1173 aa18.47■□□□□ 0.55
RB1CC1-201ENST00000025008 CCDC196A0A1B0GTZ2 297 aa18.46■□□□□ 0.55
RB1CC1-201ENST00000025008 NAA15Q9BXJ9 866 aaKnown RBP18.46■□□□□ 0.55
RB1CC1-201ENST00000025008 GTPBP4Q9BZE4 634 aaKnown RBP18.46■□□□□ 0.55
RB1CC1-201ENST00000025008 GJB2P29033 226 aa18.46■□□□□ 0.55
RB1CC1-201ENST00000025008 SYNJ2O15056 1496 aa18.46■□□□□ 0.55
RB1CC1-201ENST00000025008 CCDC91Q7Z6B0 441 aa18.46■□□□□ 0.55
RB1CC1-201ENST00000025008 RTEL1-TNFRSF6BF6WH68 1400 aa18.46■□□□□ 0.55
RB1CC1-201ENST00000025008 VPS36Q86VN1 386 aa18.46■□□□□ 0.55
RB1CC1-201ENST00000025008 CNNM3Q8NE01 707 aa18.46■□□□□ 0.55
RB1CC1-201ENST00000025008 NUP88Q99567 741 aaPredicted RBP18.46■□□□□ 0.55
RB1CC1-201ENST00000025008 TUBB4AP04350 444 aa18.45■□□□□ 0.54
RB1CC1-201ENST00000025008 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.45■□□□□ 0.54
RB1CC1-201ENST00000025008 TROQ12816 1431 aaPredicted RBP18.45■□□□□ 0.54
RB1CC1-201ENST00000025008 CETN2P41208 172 aa18.45■□□□□ 0.54
RB1CC1-201ENST00000025008 IVLP07476 585 aa18.45■□□□□ 0.54
RB1CC1-201ENST00000025008 ATF3P18847 181 aa18.45■□□□□ 0.54
RB1CC1-201ENST00000025008 TMEM132AQ24JP5 1023 aa18.45■□□□□ 0.54
RB1CC1-201ENST00000025008 CACNA2D4Q7Z3S7 1137 aa18.45■□□□□ 0.54
RB1CC1-201ENST00000025008 FAM177BA6PVY3 158 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms