RNA–Protein interactions for RNA: ENSMUST00000186659.6

Tubgcp4-215, Transcript of Gamma-tubulin complex component 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Tubgcp4, Length 2,915 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4-215ENSMUST00000186659 CalcaP70160 136 aa18.4■□□□□ 0.54
Tubgcp4-215ENSMUST00000186659 Trim27Q62158 513 aa18.4■□□□□ 0.54
Tubgcp4-215ENSMUST00000186659 Cavin2Q63918 418 aaKnown RBP18.4■□□□□ 0.54
Tubgcp4-215ENSMUST00000186659 Kif18aQ91WD7 886 aa18.4■□□□□ 0.54
Tubgcp4-215ENSMUST00000186659 Gli3Q61602 1583 aa18.4■□□□□ 0.54
Tubgcp4-215ENSMUST00000186659 Disp3A3KFU9 1347 aa18.4■□□□□ 0.54
Tubgcp4-215ENSMUST00000186659 Ttll7A4Q9F0 912 aa18.4■□□□□ 0.54
Tubgcp4-215ENSMUST00000186659 Ppp2r3aB2RXC8 1150 aa18.4■□□□□ 0.54
Tubgcp4-215ENSMUST00000186659 4930572O03RikQ8C5Y0 211 aa18.4■□□□□ 0.54
Tubgcp4-215ENSMUST00000186659 Cwc27Q3TKY6 469 aa18.39■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Fam13aQ8BGI4 693 aa18.39■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 CarsQ9ER72 831 aaKnown RBP18.39■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Simc1E9Q6E9 1354 aa18.38■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Arfgef2A2A5R2 1792 aa18.38■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Slc4a10Q5DTL9 1118 aa18.38■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Srgap3Q812A2 1099 aa18.38■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Rtn4Q99P72 1162 aaKnown RBP18.38■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Hspa1lP16627 641 aa18.37■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Map3k2Q61083 619 aa18.37■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 SympkQ80X82 1284 aa18.37■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Msh6P54276 1358 aaKnown RBP18.37■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Tlr7P58681 1050 aa18.37■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Znf526Q8BI66 675 aa18.37■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Bcl2l12Q9D3J3 255 aa18.37■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Slit2Q9R1B9 1521 aa18.37■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 GorabQ8BRM2 368 aa18.36■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Tom1O88746 492 aa18.36■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Efcab2Q9CQ46 164 aa18.36■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Col1a2Q01149 1372 aa18.35■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Nup153E9Q3G8 1462 aaKnown RBP18.35■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Ppp1r42Q8R1Z4 357 aa18.35■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Robo1O89026 1612 aa18.35■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Ccnl1Q52KE7 532 aaKnown RBP18.34■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Eif3bQ8JZQ9 803 aaKnown RBP18.34■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Igsf1Q7TQA1 1317 aa18.34■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Plekhd1B2RPU2 505 aa18.33■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 CoilQ5SU73 570 aa18.33■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Ipo8Q7TMY7 1010 aa18.33■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Golgb1E9PVZ8 3238 aa18.33■□□□□ 0.53
Tubgcp4-215ENSMUST00000186659 Gnai2P08752 355 aaKnown RBP18.33■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 ApobrQ8VBT6 942 aa18.33■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Atl3Q91YH5 541 aa18.33■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Pdia6Q922R8 440 aaKnown RBP18.33■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Zmym3Q9JLM4 1370 aa18.32■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Eif4g2Q62448 906 aaKnown RBP18.32■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 ZgpatQ8VDM1 511 aa18.32■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 TefQ9JLC6 301 aa18.32■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Siglec1Q62230 1695 aa18.31■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Ints5Q8CHT3 1018 aa18.31■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Pard3Q99NH2 1333 aa18.31■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Adam1aQ60813 791 aa18.31■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Tet3Q8BG87 1668 aa18.31■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Wnk3Q80XP9 1757 aa18.3■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Brd1E9PZ26 1189 aaKnown RBP18.3■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 PsapQ61207 557 aaKnown RBP18.3■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Ipo9Q91YE6 1041 aa18.3■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Bicc1Q99MQ1 977 aaKnown RBP18.3■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Ybx3Q9JKB3 361 aaKnown RBP18.3■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Nek4Q9Z1J2 792 aa18.3■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Pnpla7A2AJ88 1352 aa18.29■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Pa2g4P50580 394 aaKnown RBP18.29■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Taf7Q9R1C0 341 aa18.29■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Adgrb1Q3UHD1 1582 aa18.29■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Stk11ipQ3TAA7 1072 aa18.29■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Cap2Q9CYT6 476 aa18.29■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Chmp4bQ9D8B3 224 aaKnown RBP18.29■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Cnksr1A2A9K7 700 aa18.28■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Zbtb45Q52KG4 520 aa18.28■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Q8BT18 775 aa18.28■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 HnrnpuQ8VEK3 800 aaKnown RBP18.28■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Irf9Q61179 399 aa18.28■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Bcar3Q9QZK2 820 aa18.28■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Trpm3Q5F4S9 1721 aa18.27■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Sf3b2Q3UJB0 878 aaKnown RBP18.27■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Ccdc27Q3V036 639 aa18.27■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Echdc1Q9D9V3 322 aa18.27■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Syde2E9PUP1 1314 aa18.27■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Igflr1Q3U4N7 345 aa18.27■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Lmbr1lQ9D1E5 489 aa18.27■□□□□ 0.52
Tubgcp4-215ENSMUST00000186659 Map7O88735 730 aa18.26■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Abcc12Q80WJ6 1366 aa18.26■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Atg4a-psA0A0G2JFS9 396 aa18.26■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Tm6sf1P58749 370 aa18.26■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Tgfb1i1Q62219 461 aa18.26■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Bend3Q6PAL0 825 aa18.26■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Atg4aQ8C9S8 396 aa18.26■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Adcy9P51830 1353 aa18.26■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 NmiO35309 314 aa18.25■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Edc3Q8K2D3 508 aaKnown RBP18.25■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Zfp142G5E869 1843 aa18.25■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Iqsec3Q3TES0 1195 aa18.25■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Sgsm1Q8BPQ7 1093 aa18.25■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Nphp1Q9QY53 687 aa18.25■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Wdr63B2RY71 923 aa18.24■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Smg7Q5RJH6 1138 aaKnown RBP18.24■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Slc5a4bQ91ZP4 660 aa18.24■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Ccdc129Q14B48 1034 aa18.24■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Scaf1Q5U4C3 1256 aaKnown RBP18.24■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Bsdc1Q80Y55 427 aa18.24■□□□□ 0.51
Tubgcp4-215ENSMUST00000186659 Aldh1l2Q8K009 923 aa18.24■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms