RNA–Protein interactions for RNA: ENSMUST00000173600.1

Ltb-203, Transcript of Lymphotoxin-beta, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ltb, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltb-203ENSMUST00000173600 Trpm3Q5F4S9 1721 aa28.12■■■□□ 2.09
Ltb-203ENSMUST00000173600 Nlrp6Q91WS2 869 aa28.11■■■□□ 2.09
Ltb-203ENSMUST00000173600 Tsen2Q6P7W5 460 aa28.1■■■□□ 2.09
Ltb-203ENSMUST00000173600 Mapk8ip2Q9ERE9 830 aa28.1■■■□□ 2.09
Ltb-203ENSMUST00000173600 Kiaa1107Q80TK0 1369 aa28.09■■■□□ 2.09
Ltb-203ENSMUST00000173600 Kndc1Q0KK55 1742 aa28.09■■■□□ 2.09
Ltb-203ENSMUST00000173600 Ric1Q69ZJ7 1422 aa28.09■■■□□ 2.09
Ltb-203ENSMUST00000173600 Rab11fip3Q8CHD8 1047 aa28.08■■■□□ 2.09
Ltb-203ENSMUST00000173600 CpzQ8R4V4 654 aa28.08■■■□□ 2.09
Ltb-203ENSMUST00000173600 AceP09470 1312 aa28.08■■■□□ 2.09
Ltb-203ENSMUST00000173600 Kcnn1Q9EQR3 537 aa28.07■■■□□ 2.08
Ltb-203ENSMUST00000173600 TmpoQ61033 693 aaKnown RBP28.06■■■□□ 2.08
Ltb-203ENSMUST00000173600 RtcbQ99LF4 505 aaKnown RBP28.06■■■□□ 2.08
Ltb-203ENSMUST00000173600 Tiam2Q6ZPF3 1715 aa28.05■■■□□ 2.08
Ltb-203ENSMUST00000173600 Tlr8P58682 1032 aa28.04■■■□□ 2.08
Ltb-203ENSMUST00000173600 Tcerg1Q8CGF7 1100 aaKnown RBP28.03■■■□□ 2.08
Ltb-203ENSMUST00000173600 Efcab2Q9CQ46 164 aa28.03■■■□□ 2.08
Ltb-203ENSMUST00000173600 U2af1Q9D883 239 aaKnown RBP28.03■■■□□ 2.08
Ltb-203ENSMUST00000173600 Cabp2Q9JLK4 216 aa28.03■■■□□ 2.08
Ltb-203ENSMUST00000173600 Slfnl1Q8BHW9 410 aa28.01■■■□□ 2.07
Ltb-203ENSMUST00000173600 Togaram1Q6A070 1776 aaKnown RBP28.01■■■□□ 2.07
Ltb-203ENSMUST00000173600 Nav1Q8CH77 1875 aa28■■■□□ 2.07
Ltb-203ENSMUST00000173600 GsdmaQ9EST1 446 aa27.99■■■□□ 2.07
Ltb-203ENSMUST00000173600 ScaperF8VQ70 1398 aaKnown RBP27.99■■■□□ 2.07
Ltb-203ENSMUST00000173600 1810065E05RikQ5NC41 235 aa27.98■■■□□ 2.07
Ltb-203ENSMUST00000173600 Clcn1Q64347 994 aa27.98■■■□□ 2.07
Ltb-203ENSMUST00000173600 Rnaseh2aQ9CWY8 301 aa27.96■■■□□ 2.07
Ltb-203ENSMUST00000173600 Syde2E9PUP1 1314 aa27.95■■■□□ 2.07
Ltb-203ENSMUST00000173600 Adgre1Q61549 931 aa27.95■■■□□ 2.06
Ltb-203ENSMUST00000173600 Wdr66E9Q743 1299 aa27.94■■■□□ 2.06
Ltb-203ENSMUST00000173600 Pde4dQ01063 747 aa27.94■■■□□ 2.06
Ltb-203ENSMUST00000173600 Lrrc43Q3V0L5 667 aa27.94■■■□□ 2.06
Ltb-203ENSMUST00000173600 Abcc12Q80WJ6 1366 aa27.94■■■□□ 2.06
Ltb-203ENSMUST00000173600 Camkk2Q8C078 588 aa27.93■■■□□ 2.06
Ltb-203ENSMUST00000173600 Amhr2Q8K592 568 aa27.93■■■□□ 2.06
Ltb-203ENSMUST00000173600 Cyp2c67Q569X9 491 aa27.92■■■□□ 2.06
Ltb-203ENSMUST00000173600 Srp68Q8BMA6 625 aaKnown RBP27.92■■■□□ 2.06
Ltb-203ENSMUST00000173600 HmcesQ8R1M0 353 aaKnown RBP27.92■■■□□ 2.06
Ltb-203ENSMUST00000173600 Adcy9P51830 1353 aa27.91■■■□□ 2.06
Ltb-203ENSMUST00000173600 StrcQ8VIM6 1809 aa27.91■■■□□ 2.06
Ltb-203ENSMUST00000173600 Taf1dQ9D4V4 322 aa27.91■■■□□ 2.06
Ltb-203ENSMUST00000173600 DiexfQ8BTT6 772 aaKnown RBP27.9■■■□□ 2.06
Ltb-203ENSMUST00000173600 PigbQ9JJQ0 542 aa27.9■■■□□ 2.06
Ltb-203ENSMUST00000173600 Zfyve9A2A8R0 1397 aa27.89■■■□□ 2.06
Ltb-203ENSMUST00000173600 Casz1Q9CWL2 1761 aa27.89■■■□□ 2.06
Ltb-203ENSMUST00000173600 Tgfb2P27090 414 aa27.89■■■□□ 2.06
Ltb-203ENSMUST00000173600 Iqcf3Q9D498 203 aa27.89■■■□□ 2.06
Ltb-203ENSMUST00000173600 Cyp2c69E9PXC3 491 aa27.88■■■□□ 2.05
Ltb-203ENSMUST00000173600 Cyp2c40P56657 491 aa27.88■■■□□ 2.05
Ltb-203ENSMUST00000173600 Atp1b3P97370 278 aa27.88■■■□□ 2.05
Ltb-203ENSMUST00000173600 Zbtb1Q91VL9 713 aa27.88■■■□□ 2.05
Ltb-203ENSMUST00000173600 Anp32bQ9EST5 272 aaKnown RBP27.87■■■□□ 2.05
Ltb-203ENSMUST00000173600 Rtf1A2AQ19 715 aaKnown RBP27.85■■■□□ 2.05
Ltb-203ENSMUST00000173600 Q4VA45 678 aa27.85■■■□□ 2.05
Ltb-203ENSMUST00000173600 Btbd11Q6GQW0 1109 aa27.84■■■□□ 2.05
Ltb-203ENSMUST00000173600 Slurp2P0DP59 97 aa27.83■■■□□ 2.05
Ltb-203ENSMUST00000173600 Irx6Q9ER75 438 aa27.83■■■□□ 2.05
Ltb-203ENSMUST00000173600 Myo5bP21271 1818 aa27.83■■■□□ 2.05
Ltb-203ENSMUST00000173600 Q7TT23 1179 aa27.82■■■□□ 2.04
Ltb-203ENSMUST00000173600 Spon1Q8VCC9 807 aa27.82■■■□□ 2.04
Ltb-203ENSMUST00000173600 Tktl2Q9D4D4 627 aa27.82■■■□□ 2.04
Ltb-203ENSMUST00000173600 ArsiQ32KI9 573 aa27.81■■■□□ 2.04
Ltb-203ENSMUST00000173600 Trip6Q9Z1Y4 480 aa27.81■■■□□ 2.04
Ltb-203ENSMUST00000173600 Strn4P58404 760 aa27.8■■■□□ 2.04
Ltb-203ENSMUST00000173600 MetP16056 1379 aa27.8■■■□□ 2.04
Ltb-203ENSMUST00000173600 Col4a1P02463 1669 aa27.8■■■□□ 2.04
Ltb-203ENSMUST00000173600 Nip7Q9CXK8 180 aaKnown RBP27.79■■■□□ 2.04
Ltb-203ENSMUST00000173600 Cfap70D3YVL2 1141 aa27.77■■■□□ 2.04
Ltb-203ENSMUST00000173600 FktnQ8R507 461 aa27.77■■■□□ 2.04
Ltb-203ENSMUST00000173600 SnrkQ8VDU5 748 aa27.77■■■□□ 2.04
Ltb-203ENSMUST00000173600 Nsfl1cQ9CZ44 370 aaKnown RBP27.77■■■□□ 2.04
Ltb-203ENSMUST00000173600 Apaf1O88879 1249 aa27.76■■■□□ 2.03
Ltb-203ENSMUST00000173600 Rpgrip1lQ8CG73 1264 aa27.76■■■□□ 2.03
Ltb-203ENSMUST00000173600 Frmpd3A0A140LIW3 1774 aa27.76■■■□□ 2.03
Ltb-203ENSMUST00000173600 Wdhd1P59328 1117 aa27.74■■■□□ 2.03
Ltb-203ENSMUST00000173600 Mylk2Q8VCR8 613 aa27.74■■■□□ 2.03
Ltb-203ENSMUST00000173600 Mapk8ip3Q9ESN9 1337 aa27.73■■■□□ 2.03
Ltb-203ENSMUST00000173600 Prim1P20664 417 aa27.73■■■□□ 2.03
Ltb-203ENSMUST00000173600 Gm12185Q5NCB2 835 aa27.73■■■□□ 2.03
Ltb-203ENSMUST00000173600 TrhQ62361 256 aa27.73■■■□□ 2.03
Ltb-203ENSMUST00000173600 Ubn2Q80WC1 1314 aa27.72■■■□□ 2.03
Ltb-203ENSMUST00000173600 Cnnm1Q0GA42 951 aa27.72■■■□□ 2.03
Ltb-203ENSMUST00000173600 Ggnbp2Q5SV77 696 aa27.71■■■□□ 2.03
Ltb-203ENSMUST00000173600 Rbm26Q6NZN0 1012 aaKnown RBP27.71■■■□□ 2.03
Ltb-203ENSMUST00000173600 Podxl2Q8CAE9 603 aa27.71■■■□□ 2.03
Ltb-203ENSMUST00000173600 IarsQ8BU30 1262 aa27.7■■■□□ 2.02
Ltb-203ENSMUST00000173600 Rapgef4Q9EQZ6 1011 aa27.69■■■□□ 2.02
Ltb-203ENSMUST00000173600 Ddx60E9PZQ1 1711 aa27.69■■■□□ 2.02
Ltb-203ENSMUST00000173600 Atf7ipQ7TT18 1306 aa27.68■■■□□ 2.02
Ltb-203ENSMUST00000173600 EgfrQ01279 1210 aa27.68■■■□□ 2.02
Ltb-203ENSMUST00000173600 B4galnt4Q766D5 1034 aa27.68■■■□□ 2.02
Ltb-203ENSMUST00000173600 Col4a5Q63ZW6 1691 aa27.68■■■□□ 2.02
Ltb-203ENSMUST00000173600 Nedd4P46935 887 aaKnown RBP27.67■■■□□ 2.02
Ltb-203ENSMUST00000173600 Flad1Q8R123 492 aa27.67■■■□□ 2.02
Ltb-203ENSMUST00000173600 TefQ9JLC6 301 aa27.67■■■□□ 2.02
Ltb-203ENSMUST00000173600 Dpf1Q9QX66 387 aa27.67■■■□□ 2.02
Ltb-203ENSMUST00000173600 Megf6Q80V70 1572 aa27.66■■■□□ 2.02
Ltb-203ENSMUST00000173600 Prr5lA2AVJ5 370 aa27.66■■■□□ 2.02
Ltb-203ENSMUST00000173600 Cyp2c68K7N6C2 491 aa27.66■■■□□ 2.02
Ltb-203ENSMUST00000173600 Prkab2Q6PAM0 271 aa27.66■■■□□ 2.02
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms