RNA–Protein interactions for RNA: ENSMUST00000120580.7

Prpf39-201, Transcript of Pre-mRNA-processing factor 39, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Prpf39, Length 4,069 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39-201ENSMUST00000120580 Pdlim2Q8R1G6 349 aa12.25□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Tnnt3Q9QZ47 272 aa12.25□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Frmpd3A0A140LIW3 1774 aa12.25□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Nkx1-2P42580 305 aa12.25□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Nyap1Q6PFX7 833 aa12.25□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Vps33bP59016 617 aa12.24□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Ppm1mQ8BU27 406 aa12.24□□□□□ -0.45
Prpf39-201ENSMUST00000120580 PigbQ9JJQ0 542 aa12.24□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Sos2Q02384 1333 aa12.24□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Usp16Q99LG0 825 aa12.23□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Aldh1l1Q8R0Y6 902 aa12.23□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Myh1Q5SX40 1942 aa12.22□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Duox1A2AQ92 1551 aa12.22□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Gm10471E9Q1C7 252 aa12.22□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Chpf2Q3UU43 768 aa12.22□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Trim58Q5NCC9 485 aa12.22□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Maco1Q7TQE6 664 aaKnown RBP12.21□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Rwdd1Q9CQK7 243 aa12.21□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Psrc1Q9D0P7 329 aa12.21□□□□□ -0.45
Prpf39-201ENSMUST00000120580 AceP09470 1312 aa12.21□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Kiaa0232Q80U59 1396 aaKnown RBP12.21□□□□□ -0.45
Prpf39-201ENSMUST00000120580 Plekhd1B2RPU2 505 aa12.21□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Kif13bA0A286YCV9 1847 aa12.21□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Ankrd23Q812A3 306 aa12.21□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Atg3Q9CPX6 314 aa12.21□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Bcl11aQ9QYE3 773 aa12.2□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Fam50bQ9WTJ8 334 aa12.2□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Adamtsl1Q8BLI0 1745 aa12.2□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Aplp1Q03157 653 aa12.2□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Sik1Q60670 779 aa12.2□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Fam83gQ5SWY7 812 aa12.19□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Aldh1l2Q8K009 923 aa12.19□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Ankrd44B2RXR6 993 aa12.19□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Zfp777B9EKF4 885 aa12.19□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Rtl5Q5DTT4 599 aa12.18□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Ccdc60Q8C4J0 545 aa12.18□□□□□ -0.46
Prpf39-201ENSMUST00000120580 AU019823E9PUQ3 292 aa12.18□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Ccdc155Q80VJ8 648 aa12.18□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Bcl11bQ99PV8 884 aa12.18□□□□□ -0.46
Prpf39-201ENSMUST00000120580 AtrnQ9WU60 1428 aa12.18□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Zranb3Q6NZP1 1069 aa12.18□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Eno4Q8C042 619 aa12.17□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Tm6sf1P58749 370 aa12.17□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Iqcf3Q9D498 203 aa12.17□□□□□ -0.46
Prpf39-201ENSMUST00000120580 MetP16056 1379 aa12.17□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Upf2A2AT37 1269 aaKnown RBP12.16□□□□□ -0.46
Prpf39-201ENSMUST00000120580 FAM186AQ9D9R9 1790 aa12.16□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Btbd11Q6GQW0 1109 aa12.16□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Bend3Q6PAL0 825 aa12.16□□□□□ -0.46
Prpf39-201ENSMUST00000120580 4930572O03RikQ8C5Y0 211 aa12.16□□□□□ -0.46
Prpf39-201ENSMUST00000120580 GckrQ91X44 587 aa12.16□□□□□ -0.46
Prpf39-201ENSMUST00000120580 VirmaA2AIV2 1811 aaKnown RBP12.16□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Slc4a3P16283 1227 aa12.16□□□□□ -0.46
Prpf39-201ENSMUST00000120580 SympkQ80X82 1284 aa12.16□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Smc5Q8CG46 1101 aaKnown RBP12.16□□□□□ -0.46
Prpf39-201ENSMUST00000120580 MypnQ5DTJ9 1315 aa12.16□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Trim52Q8CDV4 233 aa12.16□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Nup98Q6PFD9 1816 aaKnown RBP12.15□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Ttll7A4Q9F0 912 aa12.15□□□□□ -0.46
Prpf39-201ENSMUST00000120580 G3bp1P97855 465 aaKnown RBP12.15□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Cap2Q9CYT6 476 aa12.15□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Morc2aQ69ZX6 1030 aa12.15□□□□□ -0.46
Prpf39-201ENSMUST00000120580 Nectin2P32507 530 aa12.15□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Cc2d1aQ8K1A6 943 aa12.15□□□□□ -0.47
Prpf39-201ENSMUST00000120580 MvpQ9EQK5 861 aa12.15□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Taf7Q9R1C0 341 aa12.15□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Fbxo41Q6NS60 873 aa12.14□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Sgsm1Q8BPQ7 1093 aa12.14□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Pm20d1Q8C165 503 aa12.14□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Zswim8Q3UHH1 1832 aaKnown RBP12.13□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Mylk2Q8VCR8 613 aa12.13□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Anp32aO35381 247 aa12.13□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Hspa2P17156 633 aa12.13□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Ginm1Q91WR6 327 aa12.13□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Slc5a4bQ91ZP4 660 aa12.13□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Senp3Q9EP97 568 aaKnown RBP12.13□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Arfgef1G3X9K3 1846 aaKnown RBP12.13□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Eif5bQ05D44 1216 aaKnown RBP12.12□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Zpr1Q62384 459 aa12.12□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Ddx54Q8K4L0 874 aaKnown RBP12.12□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Efcab2Q9CQ46 164 aa12.12□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Nrxn2E9Q7X7 1710 aa12.12□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Pnmal2G3X9N3 661 aa12.11□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Eif3bQ8JZQ9 803 aaKnown RBP12.11□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Slc5a1Q8C3K6 665 aa12.11□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Prkab2Q6PAM0 271 aa12.11□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Zeb2Q9R0G7 1215 aa12.11□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Mbd3Q9Z2D8 285 aaKnown RBP12.11□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Syde2E9PUP1 1314 aa12.1□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Scn9aQ62205 1984 aa12.1□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Zfp646Q6NV66 1788 aa12.1□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Hdac6Q9Z2V5 1149 aa12.1□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Nlrp9bQ66X22 1003 aa12.1□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Speer4bQ9D9F7 267 aa12.1□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Nutm1Q8BHP2 1126 aa12.1□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Lrit1Q8K099 624 aa12.1□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Erbb4Q61527 1308 aa12.09□□□□□ -0.47
Prpf39-201ENSMUST00000120580 Stk36Q69ZM6 1316 aa12.09□□□□□ -0.47
Prpf39-201ENSMUST00000120580 InhbeO08717 350 aa12.09□□□□□ -0.47
Prpf39-201ENSMUST00000120580 NudcO35685 332 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 144.3 ms