RNA–Protein interactions for RNA: ENSMUST00000116522.7

Nck1-202, Transcript of Cytoplasmic protein NCK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nck1, Length 4,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1-202ENSMUST00000116522 Polr3dQ91WD1 398 aa17.19■□□□□ 0.34
Nck1-202ENSMUST00000116522 LlphQ9D945 130 aaKnown RBP17.19■□□□□ 0.34
Nck1-202ENSMUST00000116522 Stx6Q9JKK1 255 aa17.19■□□□□ 0.34
Nck1-202ENSMUST00000116522 Gadd45bP22339 160 aa17.19■□□□□ 0.34
Nck1-202ENSMUST00000116522 F2rP30558 430 aa17.19■□□□□ 0.34
Nck1-202ENSMUST00000116522 GnpatP98192 678 aa17.19■□□□□ 0.34
Nck1-202ENSMUST00000116522 Ddx19aQ61655 478 aaKnown RBP17.19■□□□□ 0.34
Nck1-202ENSMUST00000116522 Fkbp5Q64378 456 aa17.19■□□□□ 0.34
Nck1-202ENSMUST00000116522 Ltv1Q6NSQ7 470 aaKnown RBP17.19■□□□□ 0.34
Nck1-202ENSMUST00000116522 Kiaa1107Q80TK0 1369 aa17.19■□□□□ 0.34
Nck1-202ENSMUST00000116522 Strn4P58404 760 aa17.19■□□□□ 0.34
Nck1-202ENSMUST00000116522 Map3k2Q61083 619 aa17.19■□□□□ 0.34
Nck1-202ENSMUST00000116522 Amotl2Q8K371 772 aa17.19■□□□□ 0.34
Nck1-202ENSMUST00000116522 EappQ5BU09 281 aa17.18■□□□□ 0.34
Nck1-202ENSMUST00000116522 Noc3lQ8VI84 807 aaKnown RBP17.18■□□□□ 0.34
Nck1-202ENSMUST00000116522 Bag3Q9JLV1 577 aaKnown RBP17.18■□□□□ 0.34
Nck1-202ENSMUST00000116522 Prrc2bQ7TPM1 1486 aaKnown RBP17.18■□□□□ 0.34
Nck1-202ENSMUST00000116522 Cavin2Q63918 418 aaKnown RBP17.18■□□□□ 0.34
Nck1-202ENSMUST00000116522 Tubb6Q922F4 447 aa17.18■□□□□ 0.34
Nck1-202ENSMUST00000116522 Ppip5k1A2ARP1 1436 aa17.18■□□□□ 0.34
Nck1-202ENSMUST00000116522 ScaperF8VQ70 1398 aaKnown RBP17.18■□□□□ 0.34
Nck1-202ENSMUST00000116522 Hoxb7P09024 217 aa17.17■□□□□ 0.34
Nck1-202ENSMUST00000116522 Washc4Q3UMB9 1173 aa17.17■□□□□ 0.34
Nck1-202ENSMUST00000116522 Ccdc178Q8CDV0 866 aa17.17■□□□□ 0.34
Nck1-202ENSMUST00000116522 Naip7Q9JIB3 1402 aa17.17■□□□□ 0.34
Nck1-202ENSMUST00000116522 Hoxa7P02830 229 aa17.17■□□□□ 0.34
Nck1-202ENSMUST00000116522 Ankib1Q6ZPS6 1085 aa17.17■□□□□ 0.34
Nck1-202ENSMUST00000116522 Gigyf1Q99MR1 1044 aaKnown RBP17.17■□□□□ 0.34
Nck1-202ENSMUST00000116522 OptnQ8K3K8 584 aa17.16■□□□□ 0.34
Nck1-202ENSMUST00000116522 Snap23O09044 210 aa17.16■□□□□ 0.34
Nck1-202ENSMUST00000116522 Kcnh5Q920E3 988 aa17.16■□□□□ 0.34
Nck1-202ENSMUST00000116522 Cfap58B2RW38 873 aa17.16■□□□□ 0.34
Nck1-202ENSMUST00000116522 Map3k19E9Q3S4 1311 aa17.16■□□□□ 0.34
Nck1-202ENSMUST00000116522 Frmpd2A0A140LI67 1392 aa17.16■□□□□ 0.34
Nck1-202ENSMUST00000116522 ZwintQ9CQU5 252 aa17.15■□□□□ 0.34
Nck1-202ENSMUST00000116522 Scaf11E9PZM7 1456 aaKnown RBP17.15■□□□□ 0.34
Nck1-202ENSMUST00000116522 Tarbp1E9Q368 1579 aa17.15■□□□□ 0.34
Nck1-202ENSMUST00000116522 Nsfl1cQ9CZ44 370 aaKnown RBP17.15■□□□□ 0.34
Nck1-202ENSMUST00000116522 Kif14L0N7N1 1674 aaKnown RBP17.15■□□□□ 0.34
Nck1-202ENSMUST00000116522 NcapgE9PWG6 1004 aa17.15■□□□□ 0.34
Nck1-202ENSMUST00000116522 Eva1cP58659 440 aa17.15■□□□□ 0.34
Nck1-202ENSMUST00000116522 Soga3Q6NZL0 945 aa17.15■□□□□ 0.34
Nck1-202ENSMUST00000116522 Adcy5P84309 1262 aa17.15■□□□□ 0.34
Nck1-202ENSMUST00000116522 Atp8b2P98199 1209 aa17.15■□□□□ 0.34
Nck1-202ENSMUST00000116522 Prpf4bQ61136 1007 aaKnown RBP17.14■□□□□ 0.33
Nck1-202ENSMUST00000116522 GphnQ8BUV3 769 aaKnown RBP17.14■□□□□ 0.33
Nck1-202ENSMUST00000116522 AU022751B1B0V2 589 aa17.14■□□□□ 0.33
Nck1-202ENSMUST00000116522 4930572O03RikQ8C5Y0 211 aa17.14■□□□□ 0.33
Nck1-202ENSMUST00000116522 Pa2g4P50580 394 aaKnown RBP17.14■□□□□ 0.33
Nck1-202ENSMUST00000116522 Mrps27Q8BK72 415 aaKnown RBP17.14■□□□□ 0.33
Nck1-202ENSMUST00000116522 Flad1Q8R123 492 aa17.14■□□□□ 0.33
Nck1-202ENSMUST00000116522 Erc1Q99MI1 1120 aa17.14■□□□□ 0.33
Nck1-202ENSMUST00000116522 Cul7Q8VE73 1689 aa17.14■□□□□ 0.33
Nck1-202ENSMUST00000116522 Cct2P80314 535 aaKnown RBP17.13■□□□□ 0.33
Nck1-202ENSMUST00000116522 Irf9Q61179 399 aa17.13■□□□□ 0.33
Nck1-202ENSMUST00000116522 Skint5A7XUY5 1461 aa17.13■□□□□ 0.33
Nck1-202ENSMUST00000116522 RestQ8VIG1 1082 aa17.13■□□□□ 0.33
Nck1-202ENSMUST00000116522 Znf518aB2RRF6 1478 aaKnown RBP17.13■□□□□ 0.33
Nck1-202ENSMUST00000116522 Tmem94Q7TSH8 1360 aa17.13■□□□□ 0.33
Nck1-202ENSMUST00000116522 Jarid2Q62315 1234 aa17.13■□□□□ 0.33
Nck1-202ENSMUST00000116522 Wdr33Q8K4P0 1330 aaKnown RBP17.13■□□□□ 0.33
Nck1-202ENSMUST00000116522 Eya1P97767 591 aa17.13■□□□□ 0.33
Nck1-202ENSMUST00000116522 Echdc1Q9D9V3 322 aa17.13■□□□□ 0.33
Nck1-202ENSMUST00000116522 Fsd2Q8BZ52 692 aa17.12■□□□□ 0.33
Nck1-202ENSMUST00000116522 Ddx54Q8K4L0 874 aaKnown RBP17.12■□□□□ 0.33
Nck1-202ENSMUST00000116522 A0A1L1SQF0 893 aa17.12■□□□□ 0.33
Nck1-202ENSMUST00000116522 Gas2l3Q3UWW6 683 aa17.12■□□□□ 0.33
Nck1-202ENSMUST00000116522 Gsdma2Q32M21 443 aa17.12■□□□□ 0.33
Nck1-202ENSMUST00000116522 Chd1lQ9CXF7 900 aa17.12■□□□□ 0.33
Nck1-202ENSMUST00000116522 Gli2Q0VGT2 1544 aa17.12■□□□□ 0.33
Nck1-202ENSMUST00000116522 Kiaa1551Q5DTW7 1521 aa17.12■□□□□ 0.33
Nck1-202ENSMUST00000116522 Ppfia1B2RXQ2 1266 aa17.11■□□□□ 0.33
Nck1-202ENSMUST00000116522 Arid4aF8VPQ2 1261 aaKnown RBP17.11■□□□□ 0.33
Nck1-202ENSMUST00000116522 Kdm4aQ8BW72 1064 aa17.11■□□□□ 0.33
Nck1-202ENSMUST00000116522 Fam208aQ69ZR9 1610 aaKnown RBP17.11■□□□□ 0.33
Nck1-202ENSMUST00000116522 Hvcn1Q3U2S8 269 aa17.11■□□□□ 0.33
Nck1-202ENSMUST00000116522 Zkscan16A2ALW2 728 aa17.11■□□□□ 0.33
Nck1-202ENSMUST00000116522 Mcmdc2E9Q956 681 aa17.11■□□□□ 0.33
Nck1-202ENSMUST00000116522 Cavin1O54724 392 aa17.11■□□□□ 0.33
Nck1-202ENSMUST00000116522 Mum1Q6DID5 682 aa17.11■□□□□ 0.33
Nck1-202ENSMUST00000116522 AidaQ8C4Q6 305 aa17.1■□□□□ 0.33
Nck1-202ENSMUST00000116522 Fam193aQ8CGI1 1231 aaKnown RBP17.1■□□□□ 0.33
Nck1-202ENSMUST00000116522 Fhod3Q76LL6 1578 aa17.1■□□□□ 0.33
Nck1-202ENSMUST00000116522 Tmem67Q8BR76 992 aa17.1■□□□□ 0.33
Nck1-202ENSMUST00000116522 Tmx3Q8BXZ1 456 aa17.1■□□□□ 0.33
Nck1-202ENSMUST00000116522 Mbd5B1AYB6 1498 aa17.1■□□□□ 0.33
Nck1-202ENSMUST00000116522 Ube2hP62257 183 aa17.1■□□□□ 0.33
Nck1-202ENSMUST00000116522 Ptch1Q61115 1434 aa17.1■□□□□ 0.33
Nck1-202ENSMUST00000116522 Rufy2Q8R4C2 606 aa17.1■□□□□ 0.33
Nck1-202ENSMUST00000116522 Zbtb3Q91X45 518 aa17.1■□□□□ 0.33
Nck1-202ENSMUST00000116522 Ipo7Q9EPL8 1038 aaKnown RBP17.1■□□□□ 0.33
Nck1-202ENSMUST00000116522 TbcaP48428 108 aaKnown RBP17.1■□□□□ 0.33
Nck1-202ENSMUST00000116522 Eif5P59325 429 aaKnown RBP17.1■□□□□ 0.33
Nck1-202ENSMUST00000116522 Eif3bQ8JZQ9 803 aaKnown RBP17.1■□□□□ 0.33
Nck1-202ENSMUST00000116522 Aldh1l2Q8K009 923 aa17.1■□□□□ 0.33
Nck1-202ENSMUST00000116522 Ppp6r3Q922D4 844 aa17.1■□□□□ 0.33
Nck1-202ENSMUST00000116522 Mmel1Q9JLI3 765 aa17.1■□□□□ 0.33
Nck1-202ENSMUST00000116522 NefhP19246 1090 aa17.09■□□□□ 0.33
Nck1-202ENSMUST00000116522 Zbtb45Q52KG4 520 aa17.09■□□□□ 0.33
Nck1-202ENSMUST00000116522 Bms1Q6PGF5 1284 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms