RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Ccdc150Q8CDI7 1110 aa18.12■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Bag4Q8CI61 457 aa18.12■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Ccdc172Q810N9 267 aa18.12■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Cfap69Q8BH53 942 aa18.12■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Hdgfl1Q2VPR5 283 aa18.11■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Rbm27Q5SFM8 1060 aaKnown RBP18.11■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Zeb2Q9R0G7 1215 aa18.11■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Slc12a5Q91V14 1138 aa18.11■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Zmym4A2A791 1549 aaKnown RBP18.11■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Mctp2Q5RJH2 878 aa18.11■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 4931400O07RikQ9D4M5 137 aa18.11■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Ccdc181Q80ZU5 509 aa18.1■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Rrs1Q9CYH6 365 aaKnown RBP18.1■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Zkscan7E9PVW1 718 aa18.1■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 TxlnaQ6PAM1 554 aaKnown RBP18.1■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Nap1l5Q9JJF0 156 aa18.1■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Lamc3Q9R0B6 1581 aa18.1■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Uspl1Q3ULM6 1089 aa18.1■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Ankib1Q6ZPS6 1085 aa18.1■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Nap1l2P51860 460 aa18.09■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Ddx58Q6Q899 926 aa18.09■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Znf287Q9EQB9 759 aa18.09■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Stx6Q9JKK1 255 aa18.09■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Nlrp3Q8R4B8 1033 aa18.09■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Ube2hP62257 183 aa18.09■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Pip4k2bQ80XI4 416 aa18.09■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Tmc2Q8R4P4 888 aa18.09■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Ccar2Q8VDP4 922 aaKnown RBP18.09■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 IkQ9Z1M8 557 aaKnown RBP18.09■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Gbp4Q61107 620 aa18.09■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Bms1Q6PGF5 1284 aaKnown RBP18.09■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 LarsQ8BMJ2 1178 aa18.09■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Trim30cD3YVI9 513 aa18.08■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Idi2Q8BFZ6 227 aa18.08■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 LlphQ9D945 130 aaKnown RBP18.08■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Mybbp1aQ7TPV4 1344 aaKnown RBP18.08■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Ccdc191J3QQ27 883 aa18.08■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Tmem87bQ8BKU8 555 aa18.08■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Ccdc178Q8CDV0 866 aa18.08■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Mipol1Q9D9F8 279 aa18.08■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Mcm3P25206 812 aaKnown RBP18.08■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 EvcP57680 1005 aa18.08■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Hmg20bQ9Z104 317 aa18.08■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Rasa1E9PYG6 1038 aa18.08■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Sall3Q62255 1320 aa18.08■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Atf7ipQ7TT18 1306 aa18.08■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Hoxb7P09024 217 aa18.07■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 GpkowQ56A08 488 aa18.07■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Fnbp4Q6ZQ03 1031 aa18.07■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Stx1aO35526 288 aa18.07■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Paxbp1P58501 919 aa18.07■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Bcar3Q9QZK2 820 aa18.07■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Trim25Q61510 634 aaKnown RBP18.07■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Atf7Q8R0S1 413 aa18.07■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Neo1P97798 1493 aa18.06■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Gse1Q3U3C9 1213 aa18.06■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Smtnl1Q99LM3 459 aa18.06■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Ell2Q3UKU1 639 aa18.06■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Ncbp3Q8BZR9 615 aaKnown RBP18.06■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Luzp1Q8R4U7 1068 aaKnown RBP18.06■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Tmem67Q8BR76 992 aa18.06■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 NgdnQ9DB96 315 aaKnown RBP18.06■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 LyarQ08288 388 aaKnown RBP18.05■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Rnf41Q8BH75 317 aa18.05■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Fam43aQ8BUP8 424 aa18.05■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 NapbP28663 298 aa18.05■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Ddx54Q8K4L0 874 aaKnown RBP18.05■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Pde4bB1AWC9 736 aa18.05■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Rad23bP54728 416 aa18.05■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Maats1Q8BRC6 783 aa18.05■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Tspyl3Q3UYP3 334 aa18.05■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Secisbp2lQ6A098 1086 aaKnown RBP18.05■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Wdr62Q3U3T8 1523 aa18.04■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Grin2aP35436 1464 aa18.04■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Ampd3O08739 766 aa18.04■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Slc7a3P70423 618 aa18.04■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Adcy5P84309 1262 aa18.04■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Uri1Q3TLD5 531 aa18.04■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Arglu1Q3UL36 271 aaKnown RBP18.04■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Tacc1Q6Y685 774 aa18.04■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 ApobrQ8VBT6 942 aa18.04■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Jakmip3Q5DTN8 844 aa18.03■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Jade2Q6ZQF7 829 aa18.03■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Mtmr3Q8K296 1196 aa18.03■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Znf704Q9ERQ3 566 aa18.03■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Galntl5Q9D4M9 431 aa18.03■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Nucb2P81117 420 aa18.03■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Cdca8Q8BHX3 289 aa18.02■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Polr3dQ91WD1 398 aa18.02■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 AI481877A2ALV5 1481 aa18.02■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 OvosQ3UU35 1456 aa18.02■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Irf9Q61179 399 aa18.02■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Ccdc66Q6NS45 935 aa18.02■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Bloc1s2Q9CWG9 143 aa18.02■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 Rnf187Q8BFX1 236 aa18.02■□□□□ 0.48
Pcdha9-201ENSMUST00000115659 LifrP42703 1092 aa18.02■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Tsg101Q61187 391 aa18.02■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Hspa4Q61316 841 aa18.02■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Nol7Q9D7Z3 254 aaKnown RBP18.02■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Tnni2P13412 182 aa18.01■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms