RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Tmem119Q8R138 280 aa32.29■■■□□ 2.76
Tpm1-216ENSMUST00000113707 Phlpp2Q8BXA7 1320 aa32.29■■■□□ 2.76
Tpm1-216ENSMUST00000113707 Triml2E9PW10 424 aa32.28■■■□□ 2.76
Tpm1-216ENSMUST00000113707 Eif3bQ8JZQ9 803 aaKnown RBP32.28■■■□□ 2.76
Tpm1-216ENSMUST00000113707 Ipo9Q91YE6 1041 aa32.27■■■□□ 2.76
Tpm1-216ENSMUST00000113707 Ccdc183A2AJB1 534 aa32.27■■■□□ 2.76
Tpm1-216ENSMUST00000113707 Rtl5Q5DTT4 599 aa32.27■■■□□ 2.76
Tpm1-216ENSMUST00000113707 Fkbp4P30416 458 aa32.26■■■□□ 2.75
Tpm1-216ENSMUST00000113707 LifrP42703 1092 aa32.26■■■□□ 2.75
Tpm1-216ENSMUST00000113707 4930567H17RikQ3V0K5 233 aa32.26■■■□□ 2.75
Tpm1-216ENSMUST00000113707 Ubr2Q6WKZ8 1755 aa32.25■■■□□ 2.75
Tpm1-216ENSMUST00000113707 Cetn4Q8K4K1 168 aa32.25■■■□□ 2.75
Tpm1-216ENSMUST00000113707 Pard3Q99NH2 1333 aa32.25■■■□□ 2.75
Tpm1-216ENSMUST00000113707 Brd1E9PZ26 1189 aaKnown RBP32.25■■■□□ 2.75
Tpm1-216ENSMUST00000113707 Asic4Q7TNS7 539 aa32.25■■■□□ 2.75
Tpm1-216ENSMUST00000113707 GckrQ91X44 587 aa32.25■■■□□ 2.75
Tpm1-216ENSMUST00000113707 Cyp2d11P24457 504 aa32.23■■■□□ 2.75
Tpm1-216ENSMUST00000113707 Echdc1Q9D9V3 322 aa32.23■■■□□ 2.75
Tpm1-216ENSMUST00000113707 Taf7Q9R1C0 341 aa32.23■■■□□ 2.75
Tpm1-216ENSMUST00000113707 Ipo8Q7TMY7 1010 aa32.23■■■□□ 2.75
Tpm1-216ENSMUST00000113707 Smim5Q8BT42 78 aa32.21■■■□□ 2.75
Tpm1-216ENSMUST00000113707 Ak7Q9D2H2 614 aa32.21■■■□□ 2.75
Tpm1-216ENSMUST00000113707 CarsQ9ER72 831 aaKnown RBP32.21■■■□□ 2.75
Tpm1-216ENSMUST00000113707 Fam13aQ8BGI4 693 aa32.2■■■□□ 2.75
Tpm1-216ENSMUST00000113707 Speer4bQ9D9F7 267 aa32.2■■■□□ 2.75
Tpm1-216ENSMUST00000113707 Pnmal2G3X9N3 661 aa32.2■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Cgnl1Q6AW69 1298 aa32.2■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Gnai2P08752 355 aaKnown RBP32.19■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Eif4g2Q62448 906 aaKnown RBP32.19■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Kif18aQ91WD7 886 aa32.19■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Tmc1Q8R4P5 757 aa32.18■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Stk36Q69ZM6 1316 aa32.17■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Aldh8a1Q8BH00 487 aa32.17■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Iqsec3Q3TES0 1195 aa32.16■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Atg3Q9CPX6 314 aa32.16■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Ybx3Q9JKB3 361 aaKnown RBP32.16■■■□□ 2.74
Tpm1-216ENSMUST00000113707 KnstrnQ9D9Z1 312 aaKnown RBP32.15■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Gm21663A0A0G2JE01 267 aa32.14■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Gm7361D3Z6R1 267 aa32.14■■■□□ 2.74
Tpm1-216ENSMUST00000113707 5031410I06RikE9Q4E0 267 aa32.14■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Gm1979E9QAN3 267 aa32.14■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Gm5862K7N5V5 267 aa32.14■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Gm10220K7N660 267 aa32.14■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Larp1Q6ZQ58 1072 aaKnown RBP32.14■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Slc5a1Q8C3K6 665 aa32.14■■■□□ 2.74
Tpm1-216ENSMUST00000113707 ScaperF8VQ70 1398 aaKnown RBP32.14■■■□□ 2.74
Tpm1-216ENSMUST00000113707 Bcl2l13P59017 434 aa32.13■■■□□ 2.73
Tpm1-216ENSMUST00000113707 Morc2aQ69ZX6 1030 aa32.13■■■□□ 2.73
Tpm1-216ENSMUST00000113707 SympkQ80X82 1284 aa32.13■■■□□ 2.73
Tpm1-216ENSMUST00000113707 TefQ9JLC6 301 aa32.13■■■□□ 2.73
Tpm1-216ENSMUST00000113707 Gm21680A0A0G2JGR8 267 aa32.12■■■□□ 2.73
Tpm1-216ENSMUST00000113707 Ccdc27Q3V036 639 aa32.11■■■□□ 2.73
Tpm1-216ENSMUST00000113707 Gcc1Q9D4H2 778 aa32.11■■■□□ 2.73
Tpm1-216ENSMUST00000113707 Pdia6Q922R8 440 aaKnown RBP32.1■■■□□ 2.73
Tpm1-216ENSMUST00000113707 Flt4P35917 1363 aa32.1■■■□□ 2.73
Tpm1-216ENSMUST00000113707 Zeb2Q9R0G7 1215 aa32.1■■■□□ 2.73
Tpm1-216ENSMUST00000113707 Lrrc59Q922Q8 307 aaKnown RBP32.09■■■□□ 2.73
Tpm1-216ENSMUST00000113707 Adcy9P51830 1353 aa32.09■■■□□ 2.73
Tpm1-216ENSMUST00000113707 Bend3Q6PAL0 825 aa32.08■■■□□ 2.73
Tpm1-216ENSMUST00000113707 Mcm2P97310 904 aa32.07■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Cog6Q8R3I3 657 aa32.07■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Sart3Q9JLI8 962 aaKnown RBP32.07■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Atp8b2P98199 1209 aa32.06■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Znf526Q8BI66 675 aa32.06■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Ddx54Q8K4L0 874 aaKnown RBP32.06■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Wdr63B2RY71 923 aa32.06■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Irf9Q61179 399 aa32.06■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Bcl11bQ99PV8 884 aa32.06■■■□□ 2.72
Tpm1-216ENSMUST00000113707 FanclQ9CR14 375 aa32.06■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Cnnm1Q0GA42 951 aa32.05■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Exoc6bA6H5Z3 810 aa32.03■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Ppp1r42Q8R1Z4 357 aa32.03■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Efcab2Q9CQ46 164 aa32.03■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Hsp90ab1P11499 724 aaKnown RBP32.03■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Ppm1gQ61074 542 aa32.03■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Map3k2Q61083 619 aa32.02■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Srgap3Q812A2 1099 aa32.02■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Mphosph10Q810V0 681 aaKnown RBP32.01■■■□□ 2.72
Tpm1-216ENSMUST00000113707 Zap70P43404 618 aa32.01■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Nphp1Q9QY53 687 aa32.01■■■□□ 2.71
Tpm1-216ENSMUST00000113707 HellsQ60848 821 aa32■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Tbc1d32Q3URV1 1296 aa31.99■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Ints5Q8CHT3 1018 aa31.99■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Akap11E9Q777 1895 aa31.99■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Tom1O88746 492 aa31.99■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Nkx1-2P42580 305 aa31.99■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Prkab2Q6PAM0 271 aa31.99■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Bcl2l12Q9D3J3 255 aa31.99■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Tjp1P39447 1745 aaKnown RBP31.99■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Qtrt2B8ZXI1 415 aa31.98■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Cfdp1O88271 295 aaKnown RBP31.98■■■□□ 2.71
Tpm1-216ENSMUST00000113707 PigbQ9JJQ0 542 aa31.98■■■□□ 2.71
Tpm1-216ENSMUST00000113707 AceP09470 1312 aa31.98■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Ccdc146E9Q9F7 977 aa31.97■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Flad1Q8R123 492 aa31.97■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Mmp8O70138 465 aa31.97■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Eif3aP23116 1344 aaKnown RBP31.96■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Kcnh4A2A5F7 1018 aa31.96■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Cwc27Q3TKY6 469 aa31.96■■■□□ 2.71
Tpm1-216ENSMUST00000113707 Smarca5Q91ZW3 1051 aaKnown RBP31.96■■■□□ 2.71
Retrieved 100 of 22,080 RNA–protein pairs in 90.6 ms