RNA–Protein interactions for RNA: ENSMUST00000088171.10

Rtn3-204, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 4,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-204ENSMUST00000088171 Rapgef6Q5NCJ1 1609 aa12.32□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Cacna2d4Q5RJF7 1116 aa12.32□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Riok3Q9DBU3 519 aaKnown RBP12.32□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Plekhg2Q6KAU7 1340 aa12.32□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Hook2Q7TMK6 716 aa12.31□□□□□ -0.44
Rtn3-204ENSMUST00000088171 PogkQ80TC5 607 aa12.31□□□□□ -0.44
Rtn3-204ENSMUST00000088171 PdcQ9QW08 244 aa12.31□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Irx3P81067 507 aa12.31□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Myom3A2ABU4 1439 aa12.31□□□□□ -0.44
Rtn3-204ENSMUST00000088171 TxlnaQ6PAM1 554 aaKnown RBP12.31□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Bag4Q8CI61 457 aa12.31□□□□□ -0.44
Rtn3-204ENSMUST00000088171 RarsQ9D0I9 660 aaKnown RBP12.31□□□□□ -0.44
Rtn3-204ENSMUST00000088171 PtprgQ05909 1442 aa12.3□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Ccdc173A0JLY1 547 aa12.3□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Myd88P22366 296 aa12.3□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Def6Q8C2K1 630 aa12.3□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Speer4dL7N216 212 aa12.3□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Taf3Q5HZG4 932 aa12.3□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Fam13aQ8BGI4 693 aa12.3□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Prkag2Q91WG5 566 aa12.3□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Cfap45Q9D9U9 551 aa12.3□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Pdcd6ipQ9WU78 869 aaKnown RBP12.3□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Plekho1Q9JIY0 408 aa12.3□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Mx2Q9WVP9 655 aa12.3□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Fermt1P59113 677 aa12.29□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Nol12Q8BG17 217 aa12.29□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Ano8Q6PB70 1060 aa12.29□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Srgap3Q812A2 1099 aa12.29□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Apaf1O88879 1249 aa12.29□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Irgm2A0A140LIF8 407 aa12.28□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Top1mtQ8R4U6 593 aa12.28□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Ccdc39Q9D5Y1 937 aa12.28□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Kif21aQ9QXL2 1672 aa12.28□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Ppip5k2Q6ZQB6 1129 aa12.28□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Taf12Q8VE65 161 aa12.28□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Sos1Q62245 1319 aa12.28□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Rabep1O35551 862 aa12.28□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Abcd1P48410 736 aa12.28□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Traf3ip1Q149C2 625 aa12.28□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Mctp2Q5RJH2 878 aa12.28□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Mpp4Q6P7F1 635 aa12.28□□□□□ -0.44
Rtn3-204ENSMUST00000088171 ScaperF8VQ70 1398 aaKnown RBP12.28□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Mex3cQ05A36 652 aaKnown RBP12.28□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Soga3Q6NZL0 945 aa12.28□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Atp2b4Q6Q477 1205 aa12.28□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Iqca1Q9CUL5 857 aa12.28□□□□□ -0.44
Rtn3-204ENSMUST00000088171 GpkowQ56A08 488 aa12.27□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Ankle2Q6P1H6 964 aa12.27□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Sh3d21Q7TSG5 549 aa12.27□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Tmco3Q8BH01 678 aa12.27□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Dzip1Q8BMD2 852 aa12.27□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Usp37Q8C0R0 979 aa12.27□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Pm20d1Q8C165 503 aa12.27□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Pms1Q8K119 917 aa12.27□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Kifc2O08672 792 aa12.27□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Cyp7a1Q64505 503 aa12.27□□□□□ -0.45
Rtn3-204ENSMUST00000088171 1700010I14RikQ7TPG0 532 aa12.27□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Rab3gap2Q8BMG7 1366 aa12.27□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Ppm1eQ80TL0 749 aa12.27□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Hook3Q8BUK6 718 aa12.27□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Dpp7Q9ET22 506 aa12.27□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Ppip5k1A2ARP1 1436 aa12.27□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Gpr162Q3UN16 588 aa12.26□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Tsg101Q61187 391 aa12.26□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Pank1Q8K4K6 548 aa12.26□□□□□ -0.45
Rtn3-204ENSMUST00000088171 RtcbQ99LF4 505 aaKnown RBP12.26□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Nip7Q9CXK8 180 aaKnown RBP12.26□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Nsd3Q6P2L6 1439 aa12.26□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Sptbn5F6UCX4 1208 aa12.26□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Phldb2Q8K1N2 1249 aa12.26□□□□□ -0.45
Rtn3-204ENSMUST00000088171 CenpqQ9CPQ5 267 aa12.26□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Cfap53Q9D439 514 aa12.26□□□□□ -0.45
Rtn3-204ENSMUST00000088171 EzrP26040 586 aaKnown RBP12.26□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Ccdc85cE9Q6B2 420 aa12.26□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Smarcad1Q04692 1021 aa12.26□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Kdm4aQ8BW72 1064 aa12.26□□□□□ -0.45
Rtn3-204ENSMUST00000088171 PalmQ9Z0P4 383 aa12.26□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Zfp42P22227 288 aa12.25□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Cep57l1Q8VDS7 400 aa12.25□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Kank1E9Q238 1360 aa12.25□□□□□ -0.45
Rtn3-204ENSMUST00000088171 ItpripQ3TNL8 555 aa12.25□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Psmd1Q3TXS7 953 aa12.25□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Talpid3E9PV87 1520 aa12.25□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Dusp27Q148W8 1138 aa12.25□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Xrcc4Q924T3 326 aa12.25□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Cep112Q5PR68 954 aa12.25□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Slc26a8Q8R0C3 999 aa12.25□□□□□ -0.45
Rtn3-204ENSMUST00000088171 IncenpQ9WU62 880 aa12.25□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Vps8Q0P5W1 1427 aa12.24□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Kdm3aQ6PCM1 1323 aa12.24□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Pet2A2AHY8 747 aa12.24□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Ppp2r1aQ76MZ3 589 aa12.24□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Rufy2Q8R4C2 606 aa12.24□□□□□ -0.45
Rtn3-204ENSMUST00000088171 InsrP15208 1372 aa12.24□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Lrrc43Q3V0L5 667 aa12.24□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Ccne1Q61457 408 aa12.24□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Skida1Q80YR3 822 aa12.24□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Ptcd1Q8C2E4 695 aaKnown RBP12.24□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Rpgrip1lQ8CG73 1264 aa12.24□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Qtrt2B8ZXI1 415 aa12.24□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms