RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 GptQ8QZR5 496 aa14.18□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Nlgn1Q99K10 843 aa14.18□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Emilin2Q8K482 1074 aa14.18□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Nip7Q9CXK8 180 aaKnown RBP14.18□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Zfyve16Q80U44 1528 aa14.18□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Gnat3Q3V3I2 354 aa14.18□□□□□ -0.14
Pcif1-201ENSMUST00000041643 GckrQ91X44 587 aa14.18□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Cwc25Q9DBF7 416 aa14.18□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Hnrnpul1Q8VDM6 859 aaKnown RBP14.17□□□□□ -0.14
Pcif1-201ENSMUST00000041643 NhsB1AV60 1647 aa14.17□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Gtf2f1Q3THK3 508 aaKnown RBP14.17□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Gm16486A0A1D5RMD1 1434 aa14.17□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Zap70P43404 618 aa14.17□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Spty2d1Q68FG3 682 aa14.17□□□□□ -0.14
Pcif1-201ENSMUST00000041643 ThemisQ8BGW0 636 aa14.17□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Tfip11Q9ERA6 838 aaKnown RBP14.17□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Bcar3Q9QZK2 820 aa14.17□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Erc1Q99MI1 1120 aa14.16□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Hmgb2P30681 210 aaKnown RBP14.16□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Smarcc1P97496 1104 aa14.16□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Kiaa0753Q6A000 959 aa14.16□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Ltv1Q6NSQ7 470 aaKnown RBP14.16□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Ppip5k2Q6ZQB6 1129 aa14.16□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Tmem87bQ8BKU8 555 aa14.16□□□□□ -0.14
Pcif1-201ENSMUST00000041643 A0A1L1SQF0 893 aa14.15□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Sptbn5F6UCX4 1208 aa14.15□□□□□ -0.14
Pcif1-201ENSMUST00000041643 CrklP47941 303 aa14.15□□□□□ -0.14
Pcif1-201ENSMUST00000041643 TbcaP48428 108 aaKnown RBP14.15□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Nckap5lQ6GQX2 1323 aa14.15□□□□□ -0.14
Pcif1-201ENSMUST00000041643 AidaQ8C4Q6 305 aa14.15□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Txnrd1Q9JMH6 613 aa14.15□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Cul7Q8VE73 1689 aa14.15□□□□□ -0.14
Pcif1-201ENSMUST00000041643 Cyp7a1Q64505 503 aa14.15□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Trim29Q8R2Q0 587 aa14.15□□□□□ -0.15
Pcif1-201ENSMUST00000041643 4933402E13RikQ9D4D2 429 aa14.15□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Duxf3A0A0N4SV92 674 aa14.14□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Kif3aP28741 701 aa14.14□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Ak9G3UYQ4 1894 aa14.14□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Ddx17Q501J6 650 aaKnown RBP14.14□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Kcna6Q61923 529 aa14.14□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Zkscan1Q8BGS3 561 aaKnown RBP14.14□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Prim1P20664 417 aa14.14□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Babam1Q3UI43 333 aa14.14□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Rbm27Q5SFM8 1060 aaKnown RBP14.13□□□□□ -0.15
Pcif1-201ENSMUST00000041643 NaspQ99MD9 773 aaKnown RBP14.13□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Gas2l2Q5SSG4 860 aa14.13□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Plekhg1F6S200 1446 aa14.13□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Fndc1E9Q043 1732 aa14.13□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Tpm2P58774 284 aa14.13□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Isy1Q69ZQ2 285 aaKnown RBP14.13□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Abca8bQ8K440 1620 aa14.13□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Gabpb2P81069 414 aa14.13□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Tpm4Q6IRU2 248 aa14.13□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Kif20aP97329 887 aa14.13□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Ddb1Q3U1J4 1140 aaKnown RBP14.13□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Lmbr1lQ9D1E5 489 aa14.12□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Eif2ak4Q9QZ05 1648 aa14.12□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Vamp4O70480 141 aa14.12□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Tmc1Q8R4P5 757 aa14.12□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Tubb6Q922F4 447 aa14.12□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Scaf11E9PZM7 1456 aaKnown RBP14.12□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Hook1Q8BIL5 728 aa14.12□□□□□ -0.15
Pcif1-201ENSMUST00000041643 ImmtQ8CAQ8 757 aaKnown RBP14.12□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Fsd2Q8BZ52 692 aa14.11□□□□□ -0.15
Pcif1-201ENSMUST00000041643 SfswapQ3USH5 945 aaKnown RBP14.11□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Krt84Q99M73 603 aa14.11□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Fsd1Q7TPM6 496 aa14.11□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Tulp4Q9JIL5 1547 aa14.11□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Cers3Q1A3B0 383 aa14.11□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Irgm2A0A140LIF8 407 aa14.11□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Pms1Q8K119 917 aa14.11□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Trpm2Q91YD4 1506 aa14.1□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Ankrd13dQ6PD24 605 aa14.1□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Ankrd50F7BE84 1390 aa14.1□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Gpatch11Q3UFS4 262 aa14.1□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Myo3aQ8K3H5 1613 aa14.1□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Il1rapl2Q9ERS6 686 aa14.1□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Wdr17E9Q271 1322 aa14.1□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Rad17Q6NXW6 688 aa14.1□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Chd1P40201 1711 aa14.1□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Qtrt2B8ZXI1 415 aa14.09□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Kcnn1Q9EQR3 537 aa14.09□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Sel1lQ9Z2G6 790 aa14.09□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Dnajc2P54103 621 aaKnown RBP14.09□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Ncbp1Q3UYV9 790 aaKnown RBP14.09□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Tex14Q7M6U3 1450 aa14.09□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Zc3h12cQ5DTV4 884 aa14.09□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Ttc5Q99LG4 440 aa14.09□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Cavin2Q63918 418 aaKnown RBP14.08□□□□□ -0.15
Pcif1-201ENSMUST00000041643 Znf335A2A5K6 1337 aa14.08□□□□□ -0.15
Pcif1-201ENSMUST00000041643 ArsiQ32KI9 573 aa14.08□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Igflr1Q3U4N7 345 aa14.08□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Arhgap23Q69ZH9 1483 aa14.08□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Kiaa1210E9Q0C6 1637 aa14.08□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Kdm5aQ3UXZ9 1690 aa14.08□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Tpm1P58771 284 aa14.07□□□□□ -0.16
Pcif1-201ENSMUST00000041643 IkQ9Z1M8 557 aaKnown RBP14.07□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Wdr78E9PYY5 807 aa14.07□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Slc7a3P70423 618 aa14.07□□□□□ -0.16
Pcif1-201ENSMUST00000041643 Wdr63B2RY71 923 aa14.07□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms