RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Srgap3Q812A2 1099 aa18.28■□□□□ 0.52
Nup54-201ENSMUST00000038514 Ppp1r42Q8R1Z4 357 aa18.28■□□□□ 0.52
Nup54-201ENSMUST00000038514 Erbb4Q61527 1308 aa18.28■□□□□ 0.52
Nup54-201ENSMUST00000038514 Snap23O09044 210 aa18.27■□□□□ 0.52
Nup54-201ENSMUST00000038514 Gadd45bP22339 160 aa18.27■□□□□ 0.52
Nup54-201ENSMUST00000038514 AnlnQ8K298 1121 aaKnown RBP18.27■□□□□ 0.52
Nup54-201ENSMUST00000038514 Syce3B5KM66 88 aa18.27■□□□□ 0.52
Nup54-201ENSMUST00000038514 Rtn4Q99P72 1162 aaKnown RBP18.27■□□□□ 0.52
Nup54-201ENSMUST00000038514 Rtf1A2AQ19 715 aaKnown RBP18.26■□□□□ 0.51
Nup54-201ENSMUST00000038514 Mum1Q6DID5 682 aa18.26■□□□□ 0.51
Nup54-201ENSMUST00000038514 HnrnpmQ9D0E1 729 aaKnown RBP18.26■□□□□ 0.51
Nup54-201ENSMUST00000038514 Nol11Q8BJW5 723 aaKnown RBP18.26■□□□□ 0.51
Nup54-201ENSMUST00000038514 Anapc15P60007 132 aa18.25■□□□□ 0.51
Nup54-201ENSMUST00000038514 Atp8b2P98199 1209 aa18.25■□□□□ 0.51
Nup54-201ENSMUST00000038514 VgfQ0VGU4 617 aa18.25■□□□□ 0.51
Nup54-201ENSMUST00000038514 Mon2Q80TL7 1715 aa18.25■□□□□ 0.51
Nup54-201ENSMUST00000038514 Arap3Q8R5G7 1538 aa18.25■□□□□ 0.51
Nup54-201ENSMUST00000038514 MccE9PWI3 1003 aa18.25■□□□□ 0.51
Nup54-201ENSMUST00000038514 Tex2Q6ZPJ0 1128 aaKnown RBP18.25■□□□□ 0.51
Nup54-201ENSMUST00000038514 Kdm4aQ8BW72 1064 aa18.25■□□□□ 0.51
Nup54-201ENSMUST00000038514 Ush1cQ9ES64 910 aa18.25■□□□□ 0.51
Nup54-201ENSMUST00000038514 D430041D05RikF6ZGR6 1678 aa18.25■□□□□ 0.51
Nup54-201ENSMUST00000038514 Stk36Q69ZM6 1316 aa18.25■□□□□ 0.51
Nup54-201ENSMUST00000038514 Ahnak2E9PYB0 1738 aaKnown RBP18.24■□□□□ 0.51
Nup54-201ENSMUST00000038514 Abcc10Q8R4P9 1501 aa18.24■□□□□ 0.51
Nup54-201ENSMUST00000038514 Kif4P33174 1231 aa18.23■□□□□ 0.51
Nup54-201ENSMUST00000038514 Ccne1Q61457 408 aa18.23■□□□□ 0.51
Nup54-201ENSMUST00000038514 Foxp4Q9DBY0 795 aaKnown RBP18.23■□□□□ 0.51
Nup54-201ENSMUST00000038514 Rcan3Q9JKK0 239 aa18.23■□□□□ 0.51
Nup54-201ENSMUST00000038514 Phactr2B1AVP0 632 aa18.23■□□□□ 0.51
Nup54-201ENSMUST00000038514 Atp6v1dP57746 247 aa18.23■□□□□ 0.51
Nup54-201ENSMUST00000038514 Eya1P97767 591 aa18.23■□□□□ 0.51
Nup54-201ENSMUST00000038514 Rbm27Q5SFM8 1060 aaKnown RBP18.23■□□□□ 0.51
Nup54-201ENSMUST00000038514 Filip1lQ6P6L0 1131 aa18.23■□□□□ 0.51
Nup54-201ENSMUST00000038514 Tshz3Q8CGV9 1081 aa18.23■□□□□ 0.51
Nup54-201ENSMUST00000038514 Gripap1Q8VD04 806 aa18.23■□□□□ 0.51
Nup54-201ENSMUST00000038514 Glipr1l2Q9CQ35 332 aa18.23■□□□□ 0.51
Nup54-201ENSMUST00000038514 Arfgef2A2A5R2 1792 aa18.22■□□□□ 0.51
Nup54-201ENSMUST00000038514 Zscan25B2RX31 543 aa18.22■□□□□ 0.51
Nup54-201ENSMUST00000038514 Hsp90b1P08113 802 aaKnown RBP18.22■□□□□ 0.51
Nup54-201ENSMUST00000038514 Ppp1r18Q8BQ30 594 aa18.22■□□□□ 0.51
Nup54-201ENSMUST00000038514 E4f1Q8CCE9 783 aa18.22■□□□□ 0.51
Nup54-201ENSMUST00000038514 Mknk2Q8CDB0 459 aa18.22■□□□□ 0.51
Nup54-201ENSMUST00000038514 Noc3lQ8VI84 807 aaKnown RBP18.22■□□□□ 0.51
Nup54-201ENSMUST00000038514 Ripk4Q9ERK0 786 aa18.22■□□□□ 0.51
Nup54-201ENSMUST00000038514 EvcP57680 1005 aa18.22■□□□□ 0.51
Nup54-201ENSMUST00000038514 Pnma3Q8JZW8 466 aa18.22■□□□□ 0.51
Nup54-201ENSMUST00000038514 Rims2Q9EQZ7 1530 aa18.21■□□□□ 0.51
Nup54-201ENSMUST00000038514 Q3UJC8 639 aa18.21■□□□□ 0.51
Nup54-201ENSMUST00000038514 Disp3A3KFU9 1347 aa18.21■□□□□ 0.51
Nup54-201ENSMUST00000038514 Pnpla7A2AJ88 1352 aa18.2■□□□□ 0.5
Nup54-201ENSMUST00000038514 Mcmdc2E9Q956 681 aa18.2■□□□□ 0.5
Nup54-201ENSMUST00000038514 Pank2Q3U4S0 443 aa18.2■□□□□ 0.5
Nup54-201ENSMUST00000038514 St18Q80TY4 1045 aa18.2■□□□□ 0.5
Nup54-201ENSMUST00000038514 Ccdc7Q9D541 371 aa18.2■□□□□ 0.5
Nup54-201ENSMUST00000038514 Cwc27Q3TKY6 469 aa18.2■□□□□ 0.5
Nup54-201ENSMUST00000038514 Chmp4cQ9D7F7 232 aa18.2■□□□□ 0.5
Nup54-201ENSMUST00000038514 C5P06684 1680 aa18.2■□□□□ 0.5
Nup54-201ENSMUST00000038514 Becn1O88597 448 aa18.19■□□□□ 0.5
Nup54-201ENSMUST00000038514 Q3TQI7 289 aaKnown RBP18.19■□□□□ 0.5
Nup54-201ENSMUST00000038514 Tpx2A2APB8 745 aaKnown RBP18.19■□□□□ 0.5
Nup54-201ENSMUST00000038514 Smarce1O54941 411 aaKnown RBP18.19■□□□□ 0.5
Nup54-201ENSMUST00000038514 Pdia4P08003 638 aaKnown RBP18.19■□□□□ 0.5
Nup54-201ENSMUST00000038514 Gse1Q3U3C9 1213 aa18.19■□□□□ 0.5
Nup54-201ENSMUST00000038514 KinQ8K339 391 aa18.19■□□□□ 0.5
Nup54-201ENSMUST00000038514 Pmfbp1Q9WVQ0 1022 aa18.19■□□□□ 0.5
Nup54-201ENSMUST00000038514 Als2Q920R0 1651 aa18.18■□□□□ 0.5
Nup54-201ENSMUST00000038514 Dlg5E9Q9R9 1921 aa18.18■□□□□ 0.5
Nup54-201ENSMUST00000038514 Ms4a2P20490 235 aa18.18■□□□□ 0.5
Nup54-201ENSMUST00000038514 Cpa2Q504N0 417 aa18.18■□□□□ 0.5
Nup54-201ENSMUST00000038514 Pdzrn3Q69ZS0 1063 aa18.18■□□□□ 0.5
Nup54-201ENSMUST00000038514 Atf5O70191 283 aa18.18■□□□□ 0.5
Nup54-201ENSMUST00000038514 Utp18Q5SSI6 552 aaKnown RBP18.18■□□□□ 0.5
Nup54-201ENSMUST00000038514 Rnf214Q8BFU3 668 aaKnown RBP18.18■□□□□ 0.5
Nup54-201ENSMUST00000038514 Gzf1Q4VBD9 706 aa18.17■□□□□ 0.5
Nup54-201ENSMUST00000038514 Ddx19aQ61655 478 aaKnown RBP18.17■□□□□ 0.5
Nup54-201ENSMUST00000038514 Dennd6aQ8BH65 605 aa18.17■□□□□ 0.5
Nup54-201ENSMUST00000038514 NgefQ8CHT1 710 aa18.17■□□□□ 0.5
Nup54-201ENSMUST00000038514 Rbm10Q99KG3 930 aaKnown RBP18.17■□□□□ 0.5
Nup54-201ENSMUST00000038514 Hoxa7P02830 229 aa18.17■□□□□ 0.5
Nup54-201ENSMUST00000038514 Unc5clQ6R653 518 aa18.17■□□□□ 0.5
Nup54-201ENSMUST00000038514 Alpk3Q924C5 1678 aa18.16■□□□□ 0.5
Nup54-201ENSMUST00000038514 Cyp2d12Q8BVD2 504 aa18.16■□□□□ 0.5
Nup54-201ENSMUST00000038514 Nlgn1Q99K10 843 aa18.16■□□□□ 0.5
Nup54-201ENSMUST00000038514 Strn4P58404 760 aa18.16■□□□□ 0.5
Nup54-201ENSMUST00000038514 Jakmip1Q8BVL9 626 aa18.16■□□□□ 0.5
Nup54-201ENSMUST00000038514 Nckap5lQ6GQX2 1323 aa18.15■□□□□ 0.5
Nup54-201ENSMUST00000038514 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.15■□□□□ 0.5
Nup54-201ENSMUST00000038514 Elmsan1E9Q2I4 1089 aaKnown RBP18.15■□□□□ 0.5
Nup54-201ENSMUST00000038514 Mindy4Q3UQI9 744 aa18.15■□□□□ 0.5
Nup54-201ENSMUST00000038514 Chpf2Q3UU43 768 aa18.15■□□□□ 0.5
Nup54-201ENSMUST00000038514 Cyp2d11P24457 504 aa18.14■□□□□ 0.49
Nup54-201ENSMUST00000038514 Tbc1d30Q69ZT9 766 aa18.13■□□□□ 0.49
Nup54-201ENSMUST00000038514 Chd1lQ9CXF7 900 aa18.13■□□□□ 0.49
Nup54-201ENSMUST00000038514 Slx4ipQ9D7Y9 413 aa18.13■□□□□ 0.49
Nup54-201ENSMUST00000038514 Ints3Q7TPD0 1041 aaKnown RBP18.13■□□□□ 0.49
Nup54-201ENSMUST00000038514 Rad50P70388 1312 aa18.13■□□□□ 0.49
Nup54-201ENSMUST00000038514 Ccar2Q8VDP4 922 aaKnown RBP18.12■□□□□ 0.49
Nup54-201ENSMUST00000038514 Cabp4Q8VHC5 271 aa18.12■□□□□ 0.49
Nup54-201ENSMUST00000038514 Mlh1Q9JK91 760 aa18.12■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 9.6 ms