RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Rfc1P35601 1131 aa16.11■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Dact3Q0PHV7 610 aa16.11■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Bcl11bQ99PV8 884 aa16.11■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Cetn1P41209 172 aa16.11■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Atp2b2Q9R0K7 1198 aa16.11■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Diaph1O08808 1255 aa16.11■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Gbp8Q2V6D6 525 aa16.11■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Fam177a1Q8BR63 207 aa16.11■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Cwc27Q3TKY6 469 aa16.11■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Serpina10Q8R121 448 aa16.11■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Cpa2Q504N0 417 aa16.11■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Hdhd2Q3UGR5 259 aa16.11■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Cep135Q6P5D4 1140 aa16.11■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Calml4Q91WQ9 153 aa16.11■□□□□ 0.17
Col5a1-201ENSMUST00000028280 CarsQ9ER72 831 aaKnown RBP16.11■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Sh3d21Q7TSG5 549 aa16.11■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Trim11Q99PQ2 467 aa16.11■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Atad2bE9Q166 1460 aaKnown RBP16.1■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Tmco5aQ9D9D5 303 aa16.1■□□□□ 0.17
Col5a1-201ENSMUST00000028280 ImpactO55091 318 aa16.1■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Txndc16Q7TN22 820 aa16.1■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Ctage5Q8R311 779 aa16.1■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Gigyf1Q99MR1 1044 aaKnown RBP16.1■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Nfxl1E9Q8I7 918 aaKnown RBP16.1■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Klf15Q9EPW2 415 aa16.1■□□□□ 0.17
Col5a1-201ENSMUST00000028280 DonsonQ9QXP4 560 aa16.1■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Specc1Q5SXY1 1067 aa16.09■□□□□ 0.17
Col5a1-201ENSMUST00000028280 ZwintQ9CQU5 252 aa16.09■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Ktn1Q61595 1327 aaKnown RBP16.09■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Fchsd2Q3USJ8 740 aa16.09■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Gimap6Q8K349 305 aa16.09■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Arhgef5E9Q7D5 1581 aa16.08■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Akap8Q9DBR0 687 aaKnown RBP16.08■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Pus7B7ZNL8 666 aaKnown RBP16.08■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Ehbp1Q69ZW3 1231 aa16.08■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Ddx10Q80Y44 875 aaKnown RBP16.08■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Vps37dQ810I0 261 aa16.08■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Cbfa2t2O70374 594 aa16.07■□□□□ 0.16
Col5a1-201ENSMUST00000028280 ImmtQ8CAQ8 757 aaKnown RBP16.07■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Tiam1Q60610 1591 aa16.07■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Irgm2A0A140LIF8 407 aa16.07■□□□□ 0.16
Col5a1-201ENSMUST00000028280 MvpQ9EQK5 861 aa16.07■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Specc1lQ2KN98 1118 aaKnown RBP16.07■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Ccdc141E9Q8Q6 1531 aa16.07■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Spa17Q62252 149 aa16.07■□□□□ 0.16
Col5a1-201ENSMUST00000028280 E9QMW4 1145 aa16.06■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Cct4P80315 539 aaKnown RBP16.06■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Ankrd1Q9CR42 319 aa16.06■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Armc9Q9D2I5 817 aa16.06■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Rsrc1Q9DBU6 334 aa16.06■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Map7d1A2AJI0 846 aa16.06■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Stx1aO35526 288 aa16.06■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Tmc2Q8R4P4 888 aa16.06■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Adcy5P84309 1262 aa16.06■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Nbr1P97432 988 aa16.06■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Fermt2Q8CIB5 680 aa16.06■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Flad1Q8R123 492 aa16.06■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Krt7Q9DCV7 457 aa16.06■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Ncapd3Q6ZQK0 1506 aa16.06■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Zranb3Q6NZP1 1069 aa16.06■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Top1mtQ8R4U6 593 aa16.06■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Mxra7Q9CZH7 178 aa16.05■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Gucy1a3Q9ERL9 691 aa16.05■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Tacc3Q9JJ11 631 aa16.05■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Cacna2d4Q5RJF7 1116 aa16.05■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Kif5bQ61768 963 aa16.05■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Stmn4P63042 189 aa16.05■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Kiaa1211Q5PR69 1207 aa16.05■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Mcm3P25206 812 aaKnown RBP16.05■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Asxl1P59598 1514 aa16.05■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Mybbp1aQ7TPV4 1344 aaKnown RBP16.04■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Mtus1Q5HZI1 1210 aa16.04■□□□□ 0.16
Col5a1-201ENSMUST00000028280 MpripP97434 1024 aa16.04■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Pof1bQ8K4L4 587 aa16.04■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Serpinb6bO08804 377 aa16.04■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Ccdc12Q8R344 166 aaKnown RBP16.04■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Apol7aB2RT54 418 aa16.04■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Apaf1O88879 1249 aa16.04■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Kif2aP28740 705 aa16.04■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Fkbp4P30416 458 aa16.04■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Uso1Q9Z1Z0 959 aaKnown RBP16.04■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Nek5Q7TSC3 627 aa16.03■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Dennd6aQ8BH65 605 aa16.03■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Ccdc178Q8CDV0 866 aa16.03■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Vps18Q8R307 973 aa16.03■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Psmc4P54775 418 aa16.03■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Mcm6P97311 821 aa16.03■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Nup133Q8R0G9 1155 aa16.03■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Cabp2Q9JLK4 216 aa16.03■□□□□ 0.16
Col5a1-201ENSMUST00000028280 IbtkQ6ZPR6 1352 aaKnown RBP16.03■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Ddx19aQ61655 478 aaKnown RBP16.03■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Skor2A7M7C7 1008 aa16.03■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Ces1hD3Z298 562 aa16.03■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Mapk8ip1Q9WVI9 707 aa16.03■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Cfap65Q3V0B4 1847 aa16.03■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Sh2d4bA6X942 431 aa16.02■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Ell2Q3UKU1 639 aa16.02■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Sf3b2Q3UJB0 878 aaKnown RBP16.02■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Sos1Q62245 1319 aa16.02■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Ppip5k2Q6ZQB6 1129 aa16.02■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms