RNA–Protein interactions for RNA: ENSMUST00000026607.14

Chm-201, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chm, Length 4,868 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-201ENSMUST00000026607 Dzip1Q8BMD2 852 aa9.44□□□□□ -0.9
Chm-201ENSMUST00000026607 Nsfl1cQ9CZ44 370 aaKnown RBP9.44□□□□□ -0.9
Chm-201ENSMUST00000026607 TefQ9JLC6 301 aa9.44□□□□□ -0.9
Chm-201ENSMUST00000026607 Eif3aP23116 1344 aaKnown RBP9.44□□□□□ -0.9
Chm-201ENSMUST00000026607 Cct4P80315 539 aaKnown RBP9.43□□□□□ -0.9
Chm-201ENSMUST00000026607 Nol11Q8BJW5 723 aaKnown RBP9.43□□□□□ -0.9
Chm-201ENSMUST00000026607 Mmp8O70138 465 aa9.43□□□□□ -0.9
Chm-201ENSMUST00000026607 Farp2Q91VS8 1065 aa9.43□□□□□ -0.9
Chm-201ENSMUST00000026607 Mcmdc2E9Q956 681 aa9.43□□□□□ -0.9
Chm-201ENSMUST00000026607 Ddx11Q6AXC6 880 aa9.43□□□□□ -0.9
Chm-201ENSMUST00000026607 Rreb1Q3UH06 1700 aaKnown RBP9.43□□□□□ -0.9
Chm-201ENSMUST00000026607 Ints3Q7TPD0 1041 aaKnown RBP9.43□□□□□ -0.9
Chm-201ENSMUST00000026607 Rassf8Q8CJ96 419 aa9.43□□□□□ -0.9
Chm-201ENSMUST00000026607 Kdm4cQ8VCD7 1054 aa9.43□□□□□ -0.9
Chm-201ENSMUST00000026607 Sh3bp5Q9Z131 463 aa9.43□□□□□ -0.9
Chm-201ENSMUST00000026607 Igsf1Q7TQA1 1317 aa9.43□□□□□ -0.9
Chm-201ENSMUST00000026607 Prdm2A2A7B5 1709 aaKnown RBP9.42□□□□□ -0.9
Chm-201ENSMUST00000026607 AppP12023 770 aa9.42□□□□□ -0.9
Chm-201ENSMUST00000026607 RestQ8VIG1 1082 aa9.42□□□□□ -0.9
Chm-201ENSMUST00000026607 Elp1Q7TT37 1333 aaKnown RBP9.42□□□□□ -0.9
Chm-201ENSMUST00000026607 Itsn1Q9Z0R4 1714 aa9.42□□□□□ -0.9
Chm-201ENSMUST00000026607 Pcmtd1P59913 357 aa9.42□□□□□ -0.9
Chm-201ENSMUST00000026607 VgfQ0VGU4 617 aa9.42□□□□□ -0.9
Chm-201ENSMUST00000026607 Map3k2Q61083 619 aa9.42□□□□□ -0.9
Chm-201ENSMUST00000026607 Chmp3Q9CQ10 224 aa9.42□□□□□ -0.9
Chm-201ENSMUST00000026607 Neurod6P48986 337 aa9.42□□□□□ -0.9
Chm-201ENSMUST00000026607 Kif2cQ922S8 721 aa9.42□□□□□ -0.9
Chm-201ENSMUST00000026607 Fam50bQ9WTJ8 334 aa9.42□□□□□ -0.9
Chm-201ENSMUST00000026607 Nwd1A6H603 1563 aa9.42□□□□□ -0.9
Chm-201ENSMUST00000026607 Stk36Q69ZM6 1316 aa9.41□□□□□ -0.9
Chm-201ENSMUST00000026607 Cps1Q8C196 1500 aa9.41□□□□□ -0.9
Chm-201ENSMUST00000026607 Isy1Q69ZQ2 285 aaKnown RBP9.41□□□□□ -0.9
Chm-201ENSMUST00000026607 Tshz3Q8CGV9 1081 aa9.41□□□□□ -0.9
Chm-201ENSMUST00000026607 Bag4Q8CI61 457 aa9.41□□□□□ -0.9
Chm-201ENSMUST00000026607 PplQ9R269 1755 aa9.41□□□□□ -0.9
Chm-201ENSMUST00000026607 Scaf1Q5U4C3 1256 aaKnown RBP9.41□□□□□ -0.9
Chm-201ENSMUST00000026607 Nol12Q8BG17 217 aa9.41□□□□□ -0.9
Chm-201ENSMUST00000026607 Q8C5K5 320 aa9.41□□□□□ -0.9
Chm-201ENSMUST00000026607 Brf1Q8CFK2 676 aa9.41□□□□□ -0.9
Chm-201ENSMUST00000026607 Atf5O70191 283 aa9.41□□□□□ -0.9
Chm-201ENSMUST00000026607 Pip4k2bQ80XI4 416 aa9.41□□□□□ -0.9
Chm-201ENSMUST00000026607 Dixdc1Q80Y83 711 aa9.41□□□□□ -0.9
Chm-201ENSMUST00000026607 Plcd4Q8K3R3 807 aa9.41□□□□□ -0.9
Chm-201ENSMUST00000026607 Pes1Q9EQ61 584 aaKnown RBP9.41□□□□□ -0.9
Chm-201ENSMUST00000026607 Disp3A3KFU9 1347 aa9.41□□□□□ -0.9
Chm-201ENSMUST00000026607 Ier5O89113 308 aa9.4□□□□□ -0.9
Chm-201ENSMUST00000026607 Irf9Q61179 399 aa9.4□□□□□ -0.9
Chm-201ENSMUST00000026607 Mrps27Q8BK72 415 aaKnown RBP9.4□□□□□ -0.9
Chm-201ENSMUST00000026607 Glipr1l2Q9CQ35 332 aa9.4□□□□□ -0.9
Chm-201ENSMUST00000026607 Ncapd2Q8K2Z4 1392 aa9.4□□□□□ -0.9
Chm-201ENSMUST00000026607 Rasa1E9PYG6 1038 aa9.4□□□□□ -0.9
Chm-201ENSMUST00000026607 Zpr1Q62384 459 aa9.4□□□□□ -0.9
Chm-201ENSMUST00000026607 GckrQ91X44 587 aa9.4□□□□□ -0.9
Chm-201ENSMUST00000026607 Smc3Q9CW03 1217 aaKnown RBP9.4□□□□□ -0.9
Chm-201ENSMUST00000026607 Eif4a1P60843 406 aaKnown RBP9.4□□□□□ -0.91
Chm-201ENSMUST00000026607 Ano8Q6PB70 1060 aa9.4□□□□□ -0.91
Chm-201ENSMUST00000026607 Top1mtQ8R4U6 593 aa9.4□□□□□ -0.91
Chm-201ENSMUST00000026607 Wdr17E9Q271 1322 aa9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 Ncoa4Q5U4H9 625 aa9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 Iffo2Q8R2V2 512 aa9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 Cnksr1A2A9K7 700 aa9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 4930572O03RikQ8C5Y0 211 aa9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 Noc3lQ8VI84 807 aaKnown RBP9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 Phf14Q9D4H9 881 aa9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 Slit3Q9WVB4 1523 aa9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 Mum1Q6DID5 682 aa9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 Bloc1s4Q8VED2 215 aa9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 Kif1aP33173 1695 aa9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 Kdm6aO70546 1401 aa9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 EvcP57680 1005 aa9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 CgnP59242 1191 aa9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 Gripap1Q8VD04 806 aa9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 Antxr1Q9CZ52 562 aa9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 LlphQ9D945 130 aaKnown RBP9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 Speer4bQ9D9F7 267 aa9.39□□□□□ -0.91
Chm-201ENSMUST00000026607 Zkscan16A2ALW2 728 aa9.38□□□□□ -0.91
Chm-201ENSMUST00000026607 Kif4P33174 1231 aa9.38□□□□□ -0.91
Chm-201ENSMUST00000026607 Nol10Q5RJG1 687 aaKnown RBP9.38□□□□□ -0.91
Chm-201ENSMUST00000026607 Gm21663A0A0G2JE01 267 aa9.38□□□□□ -0.91
Chm-201ENSMUST00000026607 Gm7361D3Z6R1 267 aa9.38□□□□□ -0.91
Chm-201ENSMUST00000026607 5031410I06RikE9Q4E0 267 aa9.38□□□□□ -0.91
Chm-201ENSMUST00000026607 Gm1979E9QAN3 267 aa9.38□□□□□ -0.91
Chm-201ENSMUST00000026607 Gm5862K7N5V5 267 aa9.38□□□□□ -0.91
Chm-201ENSMUST00000026607 Gm10220K7N660 267 aa9.38□□□□□ -0.91
Chm-201ENSMUST00000026607 Prune1Q8BIW1 454 aa9.38□□□□□ -0.91
Chm-201ENSMUST00000026607 Slain2Q8CI08 581 aa9.38□□□□□ -0.91
Chm-201ENSMUST00000026607 Cchcr1Q8K2I2 770 aa9.38□□□□□ -0.91
Chm-201ENSMUST00000026607 Cyp27a1Q9DBG1 533 aa9.38□□□□□ -0.91
Chm-201ENSMUST00000026607 Pik3c2bE9QAN8 1632 aa9.38□□□□□ -0.91
Chm-201ENSMUST00000026607 Rnf20Q5DTM8 973 aa9.38□□□□□ -0.91
Chm-201ENSMUST00000026607 Taf7Q9R1C0 341 aa9.38□□□□□ -0.91
Chm-201ENSMUST00000026607 Abcc10Q8R4P9 1501 aa9.37□□□□□ -0.91
Chm-201ENSMUST00000026607 Tpx2A2APB8 745 aaKnown RBP9.37□□□□□ -0.91
Chm-201ENSMUST00000026607 Cpa2Q504N0 417 aa9.37□□□□□ -0.91
Chm-201ENSMUST00000026607 CoilQ5SU73 570 aa9.37□□□□□ -0.91
Chm-201ENSMUST00000026607 Smc4Q8CG47 1286 aa9.37□□□□□ -0.91
Chm-201ENSMUST00000026607 Slc26a8Q8R0C3 999 aa9.37□□□□□ -0.91
Chm-201ENSMUST00000026607 Q9D9S1 216 aa9.37□□□□□ -0.91
Chm-201ENSMUST00000026607 OptnQ8K3K8 584 aa9.37□□□□□ -0.91
Chm-201ENSMUST00000026607 Dmrtc1Q9D9R7 182 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 242.6 ms