RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Chl1P70232 1209 aa13.78□□□□□ -0.2
Herc4-201ENSMUST00000020258 Q9D9S1 216 aa13.78□□□□□ -0.2
Herc4-201ENSMUST00000020258 Tlr7P58681 1050 aa13.78□□□□□ -0.2
Herc4-201ENSMUST00000020258 Tm6sf1P58749 370 aa13.78□□□□□ -0.2
Herc4-201ENSMUST00000020258 Q8C5K5 320 aa13.78□□□□□ -0.2
Herc4-201ENSMUST00000020258 Bicd2Q921C5 820 aa13.78□□□□□ -0.2
Herc4-201ENSMUST00000020258 Depdc5P61460 1591 aa13.78□□□□□ -0.2
Herc4-201ENSMUST00000020258 ImpactO55091 318 aa13.78□□□□□ -0.2
Herc4-201ENSMUST00000020258 Cnnm1Q0GA42 951 aa13.78□□□□□ -0.2
Herc4-201ENSMUST00000020258 Nap1l3Q794H2 544 aa13.78□□□□□ -0.2
Herc4-201ENSMUST00000020258 Fam50bQ9WTJ8 334 aa13.78□□□□□ -0.2
Herc4-201ENSMUST00000020258 Chd1P40201 1711 aa13.77□□□□□ -0.2
Herc4-201ENSMUST00000020258 Slc26a8Q8R0C3 999 aa13.77□□□□□ -0.2
Herc4-201ENSMUST00000020258 MarsQ68FL6 902 aaKnown RBP13.77□□□□□ -0.21
Herc4-201ENSMUST00000020258 Zranb3Q6NZP1 1069 aa13.77□□□□□ -0.21
Herc4-201ENSMUST00000020258 Frmd3Q8BHD4 595 aa13.77□□□□□ -0.21
Herc4-201ENSMUST00000020258 Slc35g1Q8BY79 368 aa13.77□□□□□ -0.21
Herc4-201ENSMUST00000020258 Tsr2Q8C8T8 191 aa13.77□□□□□ -0.21
Herc4-201ENSMUST00000020258 Dhx16G3X8X0 1044 aaKnown RBP13.77□□□□□ -0.21
Herc4-201ENSMUST00000020258 BcanQ61361 883 aa13.77□□□□□ -0.21
Herc4-201ENSMUST00000020258 Nlgn1Q99K10 843 aa13.77□□□□□ -0.21
Herc4-201ENSMUST00000020258 Sh3bgrQ9WUZ7 214 aa13.77□□□□□ -0.21
Herc4-201ENSMUST00000020258 Atp8b2P98199 1209 aa13.76□□□□□ -0.21
Herc4-201ENSMUST00000020258 Cavin2Q63918 418 aaKnown RBP13.76□□□□□ -0.21
Herc4-201ENSMUST00000020258 Ccdc66Q6NS45 935 aa13.76□□□□□ -0.21
Herc4-201ENSMUST00000020258 Nol11Q8BJW5 723 aaKnown RBP13.76□□□□□ -0.21
Herc4-201ENSMUST00000020258 DmtnQ9WV69 405 aa13.76□□□□□ -0.21
Herc4-201ENSMUST00000020258 Frmpd2A0A140LI67 1392 aa13.76□□□□□ -0.21
Herc4-201ENSMUST00000020258 Pdzrn3Q69ZS0 1063 aa13.76□□□□□ -0.21
Herc4-201ENSMUST00000020258 Kiaa0754Q69ZZ9 979 aa13.76□□□□□ -0.21
Herc4-201ENSMUST00000020258 Evi5lH3BKQ3 813 aa13.76□□□□□ -0.21
Herc4-201ENSMUST00000020258 Map3k2Q61083 619 aa13.76□□□□□ -0.21
Herc4-201ENSMUST00000020258 Plxnc1Q9QZC2 1574 aa13.75□□□□□ -0.21
Herc4-201ENSMUST00000020258 Gsdma3Q5Y4Y6 464 aa13.75□□□□□ -0.21
Herc4-201ENSMUST00000020258 Isy1Q69ZQ2 285 aaKnown RBP13.75□□□□□ -0.21
Herc4-201ENSMUST00000020258 EngaseQ8BX80 734 aa13.75□□□□□ -0.21
Herc4-201ENSMUST00000020258 Adgrl1Q80TR1 1466 aa13.75□□□□□ -0.21
Herc4-201ENSMUST00000020258 Mmp8O70138 465 aa13.75□□□□□ -0.21
Herc4-201ENSMUST00000020258 Ddx11Q6AXC6 880 aa13.75□□□□□ -0.21
Herc4-201ENSMUST00000020258 Chmp7Q8R1T1 451 aa13.75□□□□□ -0.21
Herc4-201ENSMUST00000020258 Myo5cE9Q1F5 1742 aa13.75□□□□□ -0.21
Herc4-201ENSMUST00000020258 Fez1Q8K0X8 392 aa13.75□□□□□ -0.21
Herc4-201ENSMUST00000020258 Pmfbp1Q9WVQ0 1022 aa13.75□□□□□ -0.21
Herc4-201ENSMUST00000020258 GnpatP98192 678 aa13.74□□□□□ -0.21
Herc4-201ENSMUST00000020258 Arhgef1Q61210 920 aaKnown RBP13.74□□□□□ -0.21
Herc4-201ENSMUST00000020258 LlphQ9D945 130 aaKnown RBP13.74□□□□□ -0.21
Herc4-201ENSMUST00000020258 Neurl4Q5NCX5 1563 aa13.74□□□□□ -0.21
Herc4-201ENSMUST00000020258 Aldh1l2Q8K009 923 aa13.74□□□□□ -0.21
Herc4-201ENSMUST00000020258 Hnrnpul1Q8VDM6 859 aaKnown RBP13.74□□□□□ -0.21
Herc4-201ENSMUST00000020258 Trim30aP15533 496 aa13.73□□□□□ -0.21
Herc4-201ENSMUST00000020258 Ets1P27577 440 aa13.73□□□□□ -0.21
Herc4-201ENSMUST00000020258 Tomm22Q9CPQ3 142 aa13.73□□□□□ -0.21
Herc4-201ENSMUST00000020258 Mcmdc2E9Q956 681 aa13.73□□□□□ -0.21
Herc4-201ENSMUST00000020258 Zdhhc9P59268 364 aa13.73□□□□□ -0.21
Herc4-201ENSMUST00000020258 Ltv1Q6NSQ7 470 aaKnown RBP13.73□□□□□ -0.21
Herc4-201ENSMUST00000020258 Polr3dQ91WD1 398 aa13.73□□□□□ -0.21
Herc4-201ENSMUST00000020258 Ier5O89113 308 aa13.73□□□□□ -0.21
Herc4-201ENSMUST00000020258 Dnajc5gQ8C632 165 aa13.73□□□□□ -0.21
Herc4-201ENSMUST00000020258 Zbtb3Q91X45 518 aa13.73□□□□□ -0.21
Herc4-201ENSMUST00000020258 NpatQ8BMA5 1420 aa13.72□□□□□ -0.21
Herc4-201ENSMUST00000020258 Gm45015A0A140LII9 184 aa13.72□□□□□ -0.21
Herc4-201ENSMUST00000020258 Gm18336A0A140LIU8 765 aa13.72□□□□□ -0.21
Herc4-201ENSMUST00000020258 Hspa2P17156 633 aa13.72□□□□□ -0.21
Herc4-201ENSMUST00000020258 Dixdc1Q80Y83 711 aa13.72□□□□□ -0.21
Herc4-201ENSMUST00000020258 Mrps27Q8BK72 415 aaKnown RBP13.72□□□□□ -0.21
Herc4-201ENSMUST00000020258 Stx6Q9JKK1 255 aa13.72□□□□□ -0.21
Herc4-201ENSMUST00000020258 Slc39a6Q8C145 765 aa13.72□□□□□ -0.21
Herc4-201ENSMUST00000020258 Ccer1Q9CQL2 403 aa13.72□□□□□ -0.21
Herc4-201ENSMUST00000020258 Dnajc10Q9DC23 793 aa13.72□□□□□ -0.21
Herc4-201ENSMUST00000020258 IghaA0A0A6YXW6 389 aa13.71□□□□□ -0.21
Herc4-201ENSMUST00000020258 Tpd52l1O54818 204 aa13.71□□□□□ -0.21
Herc4-201ENSMUST00000020258 Mum1Q6DID5 682 aa13.71□□□□□ -0.21
Herc4-201ENSMUST00000020258 Hoxc9P09633 260 aa13.71□□□□□ -0.21
Herc4-201ENSMUST00000020258 Adcy5P84309 1262 aa13.71□□□□□ -0.21
Herc4-201ENSMUST00000020258 Gzf1Q4VBD9 706 aa13.71□□□□□ -0.21
Herc4-201ENSMUST00000020258 Elp1Q7TT37 1333 aaKnown RBP13.71□□□□□ -0.21
Herc4-201ENSMUST00000020258 Knl1Q66JQ7 1612 aa13.71□□□□□ -0.22
Herc4-201ENSMUST00000020258 Zscan25B2RX31 543 aa13.7□□□□□ -0.22
Herc4-201ENSMUST00000020258 Cyp2d12Q8BVD2 504 aa13.7□□□□□ -0.22
Herc4-201ENSMUST00000020258 Glipr1l2Q9CQ35 332 aa13.7□□□□□ -0.22
Herc4-201ENSMUST00000020258 Snx13Q6PHS6 957 aa13.7□□□□□ -0.22
Herc4-201ENSMUST00000020258 LratQ9JI60 231 aa13.7□□□□□ -0.22
Herc4-201ENSMUST00000020258 Abca9Q8K449 1623 aa13.7□□□□□ -0.22
Herc4-201ENSMUST00000020258 Fam13bQ8K2H3 851 aa13.7□□□□□ -0.22
Herc4-201ENSMUST00000020258 Pdcd11Q6NS46 1862 aaKnown RBP13.7□□□□□ -0.22
Herc4-201ENSMUST00000020258 Adgrl3Q80TS3 1537 aa13.7□□□□□ -0.22
Herc4-201ENSMUST00000020258 Cdk5rap2Q8K389 1822 aa13.7□□□□□ -0.22
Herc4-201ENSMUST00000020258 Arhgap23Q69ZH9 1483 aa13.69□□□□□ -0.22
Herc4-201ENSMUST00000020258 Mctp1E9PV86 951 aa13.69□□□□□ -0.22
Herc4-201ENSMUST00000020258 Gigyf1Q99MR1 1044 aaKnown RBP13.69□□□□□ -0.22
Herc4-201ENSMUST00000020258 Fbxo2Q80UW2 297 aa13.69□□□□□ -0.22
Herc4-201ENSMUST00000020258 4930504O13RikQ8C5Z9 145 aa13.69□□□□□ -0.22
Herc4-201ENSMUST00000020258 Cdca7lQ922M5 438 aa13.69□□□□□ -0.22
Herc4-201ENSMUST00000020258 Myom1Q62234 1667 aaKnown RBP13.69□□□□□ -0.22
Herc4-201ENSMUST00000020258 Cavin1O54724 392 aa13.68□□□□□ -0.22
Herc4-201ENSMUST00000020258 GpkowQ56A08 488 aa13.68□□□□□ -0.22
Herc4-201ENSMUST00000020258 Tgfb1i1Q62219 461 aa13.68□□□□□ -0.22
Herc4-201ENSMUST00000020258 Ccdc178Q8CDV0 866 aa13.68□□□□□ -0.22
Herc4-201ENSMUST00000020258 Lmbr1lQ9D1E5 489 aa13.68□□□□□ -0.22
Herc4-201ENSMUST00000020258 Disp3A3KFU9 1347 aa13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms