RNA–Protein interactions for RNA: ENSMUST00000020200.13

Cfap54-201, Transcript of Cilia- and flagella-associated protein 54, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cfap54, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54-201ENSMUST00000020200 Gm21671G3UY31 267 aa13.58□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Atg4aQ8C9S8 396 aa13.58□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Aox2Q5SGK3 1345 aa13.58□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Scaf1Q5U4C3 1256 aaKnown RBP13.58□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Tfip11Q9ERA6 838 aaKnown RBP13.58□□□□□ -0.24
Cfap54-201ENSMUST00000020200 DaxxO35613 739 aa13.57□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Nol11Q8BJW5 723 aaKnown RBP13.57□□□□□ -0.24
Cfap54-201ENSMUST00000020200 OptnQ8K3K8 584 aa13.57□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Gnai2P08752 355 aaKnown RBP13.57□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Srgap3Q812A2 1099 aa13.57□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Ppp1r42Q8R1Z4 357 aa13.57□□□□□ -0.24
Cfap54-201ENSMUST00000020200 CalcaP70160 136 aa13.56□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Myo5bP21271 1818 aa13.56□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Cgnl1Q6AW69 1298 aa13.56□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Siglec1Q62230 1695 aa13.56□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Gcc1Q9D4H2 778 aa13.55□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Dlg5E9Q9R9 1921 aa13.55□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Nid2O88322 1403 aa13.55□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Col18a1P39061 1774 aa13.55□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Exoc6bA6H5Z3 810 aa13.55□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Cwc27Q3TKY6 469 aa13.55□□□□□ -0.24
Cfap54-201ENSMUST00000020200 CoilQ5SU73 570 aa13.55□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Zranb3Q6NZP1 1069 aa13.55□□□□□ -0.24
Cfap54-201ENSMUST00000020200 CrklP47941 303 aa13.54□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Bcar3Q9QZK2 820 aa13.54□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Fam50bQ9WTJ8 334 aa13.54□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Scn4aQ9ER60 1841 aa13.54□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Cnksr1A2A9K7 700 aa13.54□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Catsper2A2ARP9 588 aa13.54□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Zap70P43404 618 aa13.54□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Map3k13Q1HKZ5 959 aa13.54□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Pdzd9Q9D9M4 266 aa13.54□□□□□ -0.24
Cfap54-201ENSMUST00000020200 4933416C03RikQ3V063 378 aa13.53□□□□□ -0.24
Cfap54-201ENSMUST00000020200 ThemisQ8BGW0 636 aa13.53□□□□□ -0.24
Cfap54-201ENSMUST00000020200 TkfcQ8VC30 578 aa13.53□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Nphp1Q9QY53 687 aa13.53□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Cyp46a1Q9WVK8 500 aa13.53□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Col1a2Q01149 1372 aa13.52□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Tlr7P58681 1050 aa13.52□□□□□ -0.24
Cfap54-201ENSMUST00000020200 Abcc12Q80WJ6 1366 aa13.52□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Atp8b2P98199 1209 aa13.52□□□□□ -0.25
Cfap54-201ENSMUST00000020200 CenppQ9CZ92 286 aa13.52□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Rfx1P48377 963 aa13.51□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Stk11ipQ3TAA7 1072 aa13.51□□□□□ -0.25
Cfap54-201ENSMUST00000020200 GckrQ91X44 587 aa13.51□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Nsfl1cQ9CZ44 370 aaKnown RBP13.51□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Gli3Q61602 1583 aa13.51□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Mmp8O70138 465 aa13.51□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Pdia3P27773 505 aaKnown RBP13.51□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Irx3P81067 507 aa13.51□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Simc1E9Q6E9 1354 aa13.5□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Wnk3Q80XP9 1757 aa13.5□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Terf2O35144 541 aa13.5□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Cfdp1O88271 295 aaKnown RBP13.5□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Card10P58660 1021 aa13.5□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Mphosph10Q810V0 681 aaKnown RBP13.5□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Ppp6r3Q922D4 844 aa13.5□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Gm10093D3YYI8 482 aa13.5□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Hdac1O09106 482 aaKnown RBP13.5□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Igfbp6P47880 238 aa13.5□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Mcm2P97310 904 aa13.5□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Prune1Q8BIW1 454 aa13.5□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Txnrd1Q9JMH6 613 aa13.5□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Bend3Q6PAL0 825 aa13.49□□□□□ -0.25
Cfap54-201ENSMUST00000020200 RgmbQ7TQ33 436 aa13.49□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Q9D2X8 372 aa13.49□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Echdc1Q9D9V3 322 aa13.49□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Stk36Q69ZM6 1316 aa13.49□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Gtf3c3Q3TMP1 882 aa13.49□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Phkg2Q9DB30 406 aa13.49□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Adcy9P51830 1353 aa13.49□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Map3k2Q61083 619 aa13.48□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Nucb1Q02819 459 aaKnown RBP13.48□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Slc4a10Q5DTL9 1118 aa13.48□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Ppip5k2Q6ZQB6 1129 aa13.48□□□□□ -0.25
Cfap54-201ENSMUST00000020200 SympkQ80X82 1284 aa13.48□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Chmp7Q8R1T1 451 aa13.48□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Acsbg1Q99PU5 721 aa13.48□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Hmox1P14901 289 aa13.47□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Pdia6Q922R8 440 aaKnown RBP13.47□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Hspa2P17156 633 aa13.47□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Larp1Q6ZQ58 1072 aaKnown RBP13.47□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Dmrtc1Q9D9R7 182 aa13.47□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Ltbp4Q8K4G1 1666 aa13.46□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Ier5O89113 308 aa13.46□□□□□ -0.25
Cfap54-201ENSMUST00000020200 PsapQ61207 557 aaKnown RBP13.46□□□□□ -0.25
Cfap54-201ENSMUST00000020200 PigbQ9JJQ0 542 aa13.46□□□□□ -0.25
Cfap54-201ENSMUST00000020200 Atp10bB1AWN4 1474 aa13.46□□□□□ -0.26
Cfap54-201ENSMUST00000020200 Anapc15-psA0A140T8L6 141 aa13.46□□□□□ -0.26
Cfap54-201ENSMUST00000020200 Mcmdc2E9Q956 681 aa13.46□□□□□ -0.26
Cfap54-201ENSMUST00000020200 Tgfb1i1Q62219 461 aa13.46□□□□□ -0.26
Cfap54-201ENSMUST00000020200 Ptpdc1Q6NZK8 747 aa13.46□□□□□ -0.26
Cfap54-201ENSMUST00000020200 Prkab2Q6PAM0 271 aa13.45□□□□□ -0.26
Cfap54-201ENSMUST00000020200 Asic4Q7TNS7 539 aa13.45□□□□□ -0.26
Cfap54-201ENSMUST00000020200 Slc39a6Q8C145 765 aa13.45□□□□□ -0.26
Cfap54-201ENSMUST00000020200 RestQ8VIG1 1082 aa13.45□□□□□ -0.26
Cfap54-201ENSMUST00000020200 Taf7Q9R1C0 341 aa13.45□□□□□ -0.26
Cfap54-201ENSMUST00000020200 Brinp3Q499E0 766 aa13.44□□□□□ -0.26
Cfap54-201ENSMUST00000020200 Tpx2A2APB8 745 aaKnown RBP13.44□□□□□ -0.26
Cfap54-201ENSMUST00000020200 Ttll7A4Q9F0 912 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms