RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Fbxo2Q80UW2 297 aa12.46□□□□□ -0.42
Clip3-201ENSMUST00000014065 LlphQ9D945 130 aaKnown RBP12.46□□□□□ -0.42
Clip3-201ENSMUST00000014065 Vwa3bJ9JI28 736 aa12.45□□□□□ -0.42
Clip3-201ENSMUST00000014065 Bcl2l13P59017 434 aa12.45□□□□□ -0.42
Clip3-201ENSMUST00000014065 Hecw2Q6I6G8 1578 aa12.45□□□□□ -0.42
Clip3-201ENSMUST00000014065 Tpx2A2APB8 745 aaKnown RBP12.45□□□□□ -0.42
Clip3-201ENSMUST00000014065 Samd1D3YXK1 519 aa12.45□□□□□ -0.42
Clip3-201ENSMUST00000014065 Bms1Q6PGF5 1284 aaKnown RBP12.45□□□□□ -0.42
Clip3-201ENSMUST00000014065 Sf3a1Q8K4Z5 791 aaKnown RBP12.45□□□□□ -0.42
Clip3-201ENSMUST00000014065 Smc3Q9CW03 1217 aaKnown RBP12.45□□□□□ -0.42
Clip3-201ENSMUST00000014065 Ino80Q6ZPV2 1559 aa12.44□□□□□ -0.42
Clip3-201ENSMUST00000014065 Yeats2Q3TUF7 1407 aa12.44□□□□□ -0.42
Clip3-201ENSMUST00000014065 Fam13bQ8K2H3 851 aa12.44□□□□□ -0.42
Clip3-201ENSMUST00000014065 Arhgap23Q69ZH9 1483 aa12.44□□□□□ -0.42
Clip3-201ENSMUST00000014065 Ift172Q6VH22 1749 aa12.44□□□□□ -0.42
Clip3-201ENSMUST00000014065 Mindy4Q3UQI9 744 aa12.44□□□□□ -0.42
Clip3-201ENSMUST00000014065 Kdm4aQ8BW72 1064 aa12.44□□□□□ -0.42
Clip3-201ENSMUST00000014065 Atp10aO54827 1508 aa12.44□□□□□ -0.42
Clip3-201ENSMUST00000014065 Knl1Q66JQ7 1612 aa12.44□□□□□ -0.42
Clip3-201ENSMUST00000014065 Adcy5P84309 1262 aa12.44□□□□□ -0.42
Clip3-201ENSMUST00000014065 NcapgE9PWG6 1004 aa12.43□□□□□ -0.42
Clip3-201ENSMUST00000014065 Zbtb45Q52KG4 520 aa12.43□□□□□ -0.42
Clip3-201ENSMUST00000014065 Pdzrn3Q69ZS0 1063 aa12.43□□□□□ -0.42
Clip3-201ENSMUST00000014065 Mlh1Q9JK91 760 aa12.43□□□□□ -0.42
Clip3-201ENSMUST00000014065 Cfdp1O88271 295 aaKnown RBP12.43□□□□□ -0.42
Clip3-201ENSMUST00000014065 Tnnt2P50752 301 aa12.43□□□□□ -0.42
Clip3-201ENSMUST00000014065 Gjb2Q00977 226 aa12.43□□□□□ -0.42
Clip3-201ENSMUST00000014065 Ccne1Q61457 408 aa12.43□□□□□ -0.42
Clip3-201ENSMUST00000014065 Tceal9Q9DD24 104 aa12.43□□□□□ -0.42
Clip3-201ENSMUST00000014065 Cavin1O54724 392 aa12.42□□□□□ -0.42
Clip3-201ENSMUST00000014065 Ints3Q7TPD0 1041 aaKnown RBP12.42□□□□□ -0.42
Clip3-201ENSMUST00000014065 Pmfbp1Q9WVQ0 1022 aa12.42□□□□□ -0.42
Clip3-201ENSMUST00000014065 Exoc6bA6H5Z3 810 aa12.42□□□□□ -0.42
Clip3-201ENSMUST00000014065 CatipB9EKE5 520 aa12.42□□□□□ -0.42
Clip3-201ENSMUST00000014065 Chpf2Q3UU43 768 aa12.42□□□□□ -0.42
Clip3-201ENSMUST00000014065 Pnma3Q8JZW8 466 aa12.42□□□□□ -0.42
Clip3-201ENSMUST00000014065 Mmp8O70138 465 aa12.41□□□□□ -0.42
Clip3-201ENSMUST00000014065 Mroh1E0CZ22 1640 aa12.41□□□□□ -0.42
Clip3-201ENSMUST00000014065 Ubap1lG3UW59 384 aa12.41□□□□□ -0.42
Clip3-201ENSMUST00000014065 Tceanc2Q8R2M0 207 aa12.41□□□□□ -0.42
Clip3-201ENSMUST00000014065 ScaperF8VQ70 1398 aaKnown RBP12.41□□□□□ -0.42
Clip3-201ENSMUST00000014065 Gys2Q8VCB3 704 aa12.4□□□□□ -0.42
Clip3-201ENSMUST00000014065 RereQ80TZ9 1558 aa12.4□□□□□ -0.42
Clip3-201ENSMUST00000014065 Atp8b2P98199 1209 aa12.4□□□□□ -0.42
Clip3-201ENSMUST00000014065 Zfp91Q62511 572 aa12.4□□□□□ -0.42
Clip3-201ENSMUST00000014065 Brf1Q8CFK2 676 aa12.4□□□□□ -0.42
Clip3-201ENSMUST00000014065 Tecpr2Q3UH45 1423 aa12.4□□□□□ -0.42
Clip3-201ENSMUST00000014065 NpatQ8BMA5 1420 aa12.4□□□□□ -0.42
Clip3-201ENSMUST00000014065 Ccdc173A0JLY1 547 aa12.4□□□□□ -0.42
Clip3-201ENSMUST00000014065 Fkbp4P30416 458 aa12.4□□□□□ -0.42
Clip3-201ENSMUST00000014065 Pabpn1Q8CCS6 302 aaKnown RBP12.4□□□□□ -0.42
Clip3-201ENSMUST00000014065 Trim30aP15533 496 aa12.39□□□□□ -0.43
Clip3-201ENSMUST00000014065 Cbx1P83917 185 aaKnown RBP12.39□□□□□ -0.43
Clip3-201ENSMUST00000014065 Kiaa0754Q69ZZ9 979 aa12.39□□□□□ -0.43
Clip3-201ENSMUST00000014065 E4f1Q8CCE9 783 aa12.39□□□□□ -0.43
Clip3-201ENSMUST00000014065 CrebrfQ8CDG5 640 aaKnown RBP12.39□□□□□ -0.43
Clip3-201ENSMUST00000014065 Stx6Q9JKK1 255 aa12.39□□□□□ -0.43
Clip3-201ENSMUST00000014065 MecomP14404 1042 aa12.39□□□□□ -0.43
Clip3-201ENSMUST00000014065 Bach2P97303 839 aa12.39□□□□□ -0.43
Clip3-201ENSMUST00000014065 Cnnm3Q32NY4 713 aa12.39□□□□□ -0.43
Clip3-201ENSMUST00000014065 PtprmP28828 1452 aa12.39□□□□□ -0.43
Clip3-201ENSMUST00000014065 Eya1P97767 591 aa12.39□□□□□ -0.43
Clip3-201ENSMUST00000014065 Mphosph10Q810V0 681 aaKnown RBP12.39□□□□□ -0.43
Clip3-201ENSMUST00000014065 Mcmdc2E9Q956 681 aa12.38□□□□□ -0.43
Clip3-201ENSMUST00000014065 Zap70P43404 618 aa12.38□□□□□ -0.43
Clip3-201ENSMUST00000014065 Anp32cQ64G17 123 aa12.38□□□□□ -0.43
Clip3-201ENSMUST00000014065 Snx13Q6PHS6 957 aa12.38□□□□□ -0.43
Clip3-201ENSMUST00000014065 Nckap5lQ6GQX2 1323 aa12.38□□□□□ -0.43
Clip3-201ENSMUST00000014065 Fmnl2A2APV2 1086 aa12.38□□□□□ -0.43
Clip3-201ENSMUST00000014065 Elmsan1E9Q2I4 1089 aaKnown RBP12.38□□□□□ -0.43
Clip3-201ENSMUST00000014065 FosbP13346 338 aa12.38□□□□□ -0.43
Clip3-201ENSMUST00000014065 Dennd6aQ8BH65 605 aa12.38□□□□□ -0.43
Clip3-201ENSMUST00000014065 Ccdc178Q8CDV0 866 aa12.38□□□□□ -0.43
Clip3-201ENSMUST00000014065 Hvcn1Q3U2S8 269 aa12.37□□□□□ -0.43
Clip3-201ENSMUST00000014065 Utp18Q5SSI6 552 aaKnown RBP12.37□□□□□ -0.43
Clip3-201ENSMUST00000014065 Ccdc66Q6NS45 935 aa12.37□□□□□ -0.43
Clip3-201ENSMUST00000014065 Ccar2Q8VDP4 922 aaKnown RBP12.37□□□□□ -0.43
Clip3-201ENSMUST00000014065 Mmel1Q9JLI3 765 aa12.37□□□□□ -0.43
Clip3-201ENSMUST00000014065 Dip2cE9PWR4 1557 aa12.37□□□□□ -0.43
Clip3-201ENSMUST00000014065 EspnlQ3UYR4 1005 aa12.37□□□□□ -0.43
Clip3-201ENSMUST00000014065 Tmem132eQ6IEE6 982 aa12.37□□□□□ -0.43
Clip3-201ENSMUST00000014065 Cfap73J3QPZ5 306 aa12.37□□□□□ -0.43
Clip3-201ENSMUST00000014065 Tpd52l1O54818 204 aa12.37□□□□□ -0.43
Clip3-201ENSMUST00000014065 Safb2Q80YR5 991 aaKnown RBP12.37□□□□□ -0.43
Clip3-201ENSMUST00000014065 Q9D9S1 216 aa12.37□□□□□ -0.43
Clip3-201ENSMUST00000014065 Ap3b2Q9JME5 1082 aa12.37□□□□□ -0.43
Clip3-201ENSMUST00000014065 Adamts7Q68SA9 1657 aa12.36□□□□□ -0.43
Clip3-201ENSMUST00000014065 Wdr78E9PYY5 807 aa12.36□□□□□ -0.43
Clip3-201ENSMUST00000014065 CebpzP53569 1052 aaKnown RBP12.36□□□□□ -0.43
Clip3-201ENSMUST00000014065 Strn4P58404 760 aa12.36□□□□□ -0.43
Clip3-201ENSMUST00000014065 Top1mtQ8R4U6 593 aa12.36□□□□□ -0.43
Clip3-201ENSMUST00000014065 Anapc15P60007 132 aa12.36□□□□□ -0.43
Clip3-201ENSMUST00000014065 Tsr2Q8C8T8 191 aa12.36□□□□□ -0.43
Clip3-201ENSMUST00000014065 Gm156Q58A37 223 aa12.36□□□□□ -0.43
Clip3-201ENSMUST00000014065 Jarid2Q62315 1234 aa12.36□□□□□ -0.43
Clip3-201ENSMUST00000014065 Unc5clQ6R653 518 aa12.36□□□□□ -0.43
Clip3-201ENSMUST00000014065 Nap1l3Q794H2 544 aa12.36□□□□□ -0.43
Clip3-201ENSMUST00000014065 Tlr7P58681 1050 aa12.35□□□□□ -0.43
Clip3-201ENSMUST00000014065 Ppfia3P60469 1194 aa12.35□□□□□ -0.43
Clip3-201ENSMUST00000014065 Ddx19aQ61655 478 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms