RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Zhx1P70121 873 aa15.21■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Gzf1Q4VBD9 706 aa15.21■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Tceanc2Q8R2M0 207 aa15.21■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Plxnc1Q9QZC2 1574 aa15.21■□□□□ 0.03
Clcn3-201ENSMUST00000004430 NinlQ6ZQ12 1394 aa15.21■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Cdkn1cP49919 348 aa15.21■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Top1mtQ8R4U6 593 aa15.21■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Mroh1E0CZ22 1640 aa15.21■□□□□ 0.03
Clcn3-201ENSMUST00000004430 Ino80Q6ZPV2 1559 aa15.21■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Anapc15-psA0A140T8L6 141 aa15.21■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Nup88Q8CEC0 753 aaKnown RBP15.21■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Cchcr1Q8K2I2 770 aa15.21■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Hmgn5Q9JL35 406 aa15.21■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Adgrl3Q80TS3 1537 aa15.2■□□□□ 0.02
Clcn3-201ENSMUST00000004430 LifrP42703 1092 aa15.2■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Brf1Q8CFK2 676 aa15.2■□□□□ 0.02
Clcn3-201ENSMUST00000004430 NaspQ99MD9 773 aaKnown RBP15.2■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Akap12Q9WTQ5 1684 aa15.2■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Nucb1Q02819 459 aaKnown RBP15.19■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Myom1Q62234 1667 aaKnown RBP15.19■□□□□ 0.02
Clcn3-201ENSMUST00000004430 CebpzP53569 1052 aaKnown RBP15.19■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Hvcn1Q3U2S8 269 aa15.19■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Ccdc66Q6NS45 935 aa15.19■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Mmel1Q9JLI3 765 aa15.19■□□□□ 0.02
Clcn3-201ENSMUST00000004430 MaddQ80U28 1577 aa15.19■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Trpm1Q2TV84 1622 aa15.18■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Eif2ak4Q9QZ05 1648 aa15.18■□□□□ 0.02
Clcn3-201ENSMUST00000004430 HnrnpmQ9D0E1 729 aaKnown RBP15.18■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Slx4ipQ9D7Y9 413 aa15.18■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Antxr1Q9CZ52 562 aa15.18■□□□□ 0.02
Clcn3-201ENSMUST00000004430 CenppQ9CZ92 286 aa15.18■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Asxl2Q8BZ32 1370 aa15.18■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Bach1P97302 739 aa15.18■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Fam83gQ5SWY7 812 aa15.18■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Nop14Q8R3N1 860 aaKnown RBP15.18■□□□□ 0.02
Clcn3-201ENSMUST00000004430 AdgbG3UZ78 1657 aa15.18■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Nol10Q5RJG1 687 aaKnown RBP15.17■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Synj2Q9D2G5 1434 aa15.17■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Naa30Q8CES0 364 aa15.17■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Fam184aE9PW83 1143 aa15.17■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Snx13Q6PHS6 957 aa15.17■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Gpatch3Q8BIY1 525 aa15.17■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Chrna2Q91X60 512 aa15.17■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Ppp1r15aP17564 657 aa15.16■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Med4Q9CQA5 270 aa15.16■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Pmfbp1Q9WVQ0 1022 aa15.16■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Arhgap23Q69ZH9 1483 aa15.16■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Cers3Q1A3B0 383 aa15.15■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Ccdc178Q8CDV0 866 aa15.15■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Ankrd50F7BE84 1390 aa15.15■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Ahdc1Q6PAL7 1594 aaKnown RBP15.15■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Fam135bQ9DAI6 1403 aa15.15■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Ift57Q8BXG3 429 aa15.15■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Cplx1P63040 134 aa15.15■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Stx6Q9JKK1 255 aa15.15■□□□□ 0.02
Clcn3-201ENSMUST00000004430 Map7d2A2AG50 781 aa15.14■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Prim1P20664 417 aa15.14■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Clcn1Q64347 994 aa15.14■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Rec8Q8C5S7 591 aa15.14■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Bms1Q6PGF5 1284 aaKnown RBP15.14■□□□□ 0.01
Clcn3-201ENSMUST00000004430 HypkQ9CR41 129 aa15.14■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Psma5Q9Z2U1 241 aaKnown RBP15.14■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Gabpb2P81069 414 aa15.14■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Sass6Q80UK7 654 aa15.14■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Ubxn4Q8VCH8 506 aa15.14■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Cyp27a1Q9DBG1 533 aa15.14■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Kiaa0556Q8C753 1610 aa15.14■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Cep170bQ80U49 1574 aa15.13■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Zkscan16A2ALW2 728 aa15.13■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Pdcl2Q78Y63 240 aa15.13■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Fam43aQ8BUP8 424 aa15.13■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Prune1Q8BIW1 454 aa15.13■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Krt85Q9Z2T6 507 aa15.13■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Ttc37F8VPK0 1563 aa15.13■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Sipa1l1Q8C0T5 1782 aa15.13■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Tex2Q6ZPJ0 1128 aaKnown RBP15.13■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Tpm3-rs7D3Z2H9 248 aa15.12■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Tpm3P21107 285 aaKnown RBP15.12■□□□□ 0.01
Clcn3-201ENSMUST00000004430 BcanQ61361 883 aa15.12■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Zpr1Q62384 459 aa15.12■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Zfp91Q62511 572 aa15.12■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Ppp6r3Q922D4 844 aa15.12■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Gigyf1Q99MR1 1044 aaKnown RBP15.12■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Cfap73J3QPZ5 306 aa15.11■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Il1rapl2Q9ERS6 686 aa15.11■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Zbtb45Q52KG4 520 aa15.11■□□□□ 0.01
Clcn3-201ENSMUST00000004430 TatQ8QZR1 454 aa15.11■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Arid4aF8VPQ2 1261 aaKnown RBP15.11■□□□□ 0.01
Clcn3-201ENSMUST00000004430 LlphQ9D945 130 aaKnown RBP15.11■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Nsd3Q6P2L6 1439 aa15.1■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Naip7Q9JIB3 1402 aa15.1■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Zkscan7E9PVW1 718 aa15.1■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Slc26a8Q8R0C3 999 aa15.1■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Adamts7Q68SA9 1657 aa15.1■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Ccne1Q61457 408 aa15.1■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Kdm4cQ8VCD7 1054 aa15.1■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Iqsec2Q5DU25 1478 aa15.1■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Zscan25B2RX31 543 aa15.09■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Anp32eP97822 260 aaKnown RBP15.09■□□□□ 0.01
Clcn3-201ENSMUST00000004430 Tmx1Q8VBT0 278 aa15.09■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 41.2 ms